RNA–Protein interactions for RNA: ENST00000225719.8

CPD-201, Transcript of carboxypeptidase D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPD, Length 9,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-201ENST00000225719 RYR3Q15413 4870 aa4.21□□□□□ -1.74
CPD-201ENST00000225719 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
CPD-201ENST00000225719 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
CPD-201ENST00000225719 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
CPD-201ENST00000225719 KMT2CQ8NEZ4 4911 aaKnown RBP4.11□□□□□ -1.75
CPD-201ENST00000225719 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
CPD-201ENST00000225719 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
CPD-201ENST00000225719 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
CPD-201ENST00000225719 LCE4AQ5TA78 99 aa4□□□□□ -1.77
CPD-201ENST00000225719 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
CPD-201ENST00000225719 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
CPD-201ENST00000225719 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
CPD-201ENST00000225719 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
CPD-201ENST00000225719 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
CPD-201ENST00000225719 BIRC6Q9NR09 4857 aa3.9□□□□□ -1.79
CPD-201ENST00000225719 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
CPD-201ENST00000225719 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
CPD-201ENST00000225719 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
CPD-201ENST00000225719 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CPD-201ENST00000225719 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
CPD-201ENST00000225719 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CPD-201ENST00000225719 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
CPD-201ENST00000225719 RYR2Q92736 4967 aa3.8□□□□□ -1.8
CPD-201ENST00000225719 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
CPD-201ENST00000225719 HERC2O95714 4834 aa3.74□□□□□ -1.81
CPD-201ENST00000225719 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
CPD-201ENST00000225719 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
CPD-201ENST00000225719 HMCN2Q8NDA2 5059 aa3.71□□□□□ -1.82
CPD-201ENST00000225719 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
CPD-201ENST00000225719 HERC1Q15751 4861 aa3.64□□□□□ -1.83
CPD-201ENST00000225719 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
CPD-201ENST00000225719 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
CPD-201ENST00000225719 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
CPD-201ENST00000225719 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
CPD-201ENST00000225719 MUC2Q02817 5179 aa3.29□□□□□ -1.88
CPD-201ENST00000225719 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
CPD-201ENST00000225719 ABCA13Q86UQ4 5058 aa3.25□□□□□ -1.89
CPD-201ENST00000225719 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
CPD-201ENST00000225719 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
CPD-201ENST00000225719 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
CPD-201ENST00000225719 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
CPD-201ENST00000225719 KMT2DO14686 5537 aa3.15□□□□□ -1.9
CPD-201ENST00000225719 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
CPD-201ENST00000225719 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
CPD-201ENST00000225719 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
CPD-201ENST00000225719 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
CPD-201ENST00000225719 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
CPD-201ENST00000225719 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
CPD-201ENST00000225719 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
CPD-201ENST00000225719 FCGBPQ9Y6R7 5405 aaPredicted RBP2.85□□□□□ -1.95
CPD-201ENST00000225719 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
CPD-201ENST00000225719 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
CPD-201ENST00000225719 NEBP20929 6669 aa2.67□□□□□ -1.98
CPD-201ENST00000225719 USH2AO75445 5202 aa2.65□□□□□ -1.99
CPD-201ENST00000225719 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
CPD-201ENST00000225719 MACF1Q9UPN3 7388 aaKnown RBP2.61□□□□□ -1.99
CPD-201ENST00000225719 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
CPD-201ENST00000225719 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
CPD-201ENST00000225719 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
CPD-201ENST00000225719 SSPOA2VEC9 5147 aa2.45□□□□□ -2.02
CPD-201ENST00000225719 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
CPD-201ENST00000225719 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
CPD-201ENST00000225719 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
CPD-201ENST00000225719 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
CPD-201ENST00000225719 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
CPD-201ENST00000225719 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
CPD-201ENST00000225719 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
CPD-201ENST00000225719 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
CPD-201ENST00000225719 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
CPD-201ENST00000225719 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
CPD-201ENST00000225719 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
CPD-201ENST00000225719 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
CPD-201ENST00000225719 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CPD-201ENST00000225719 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
CPD-201ENST00000225719 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
CPD-201ENST00000225719 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
CPD-201ENST00000225719 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 16.9 ms