RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 MT4P47944 62 aa4.14□□□□□ -1.75
LAMB1-201ENST00000222399 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
LAMB1-201ENST00000222399 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
LAMB1-201ENST00000222399 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
LAMB1-201ENST00000222399 PRM1P04553 51 aa4.05□□□□□ -1.76
LAMB1-201ENST00000222399 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
LAMB1-201ENST00000222399 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
LAMB1-201ENST00000222399 ABCA13Q86UQ4 5058 aa4.01□□□□□ -1.77
LAMB1-201ENST00000222399 MT1AP04731 61 aa4□□□□□ -1.77
LAMB1-201ENST00000222399 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
LAMB1-201ENST00000222399 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
LAMB1-201ENST00000222399 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
LAMB1-201ENST00000222399 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
LAMB1-201ENST00000222399 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
LAMB1-201ENST00000222399 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
LAMB1-201ENST00000222399 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
LAMB1-201ENST00000222399 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
LAMB1-201ENST00000222399 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
LAMB1-201ENST00000222399 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
LAMB1-201ENST00000222399 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
LAMB1-201ENST00000222399 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
LAMB1-201ENST00000222399 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
LAMB1-201ENST00000222399 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
LAMB1-201ENST00000222399 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
LAMB1-201ENST00000222399 LCE5AQ5TCM9 118 aa3.73□□□□□ -1.81
LAMB1-201ENST00000222399 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
LAMB1-201ENST00000222399 UBR4Q5T4S7 5183 aa3.7□□□□□ -1.82
LAMB1-201ENST00000222399 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
LAMB1-201ENST00000222399 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
LAMB1-201ENST00000222399 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
LAMB1-201ENST00000222399 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.83
LAMB1-201ENST00000222399 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
LAMB1-201ENST00000222399 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
LAMB1-201ENST00000222399 MUC2Q02817 5179 aa3.58□□□□□ -1.84
LAMB1-201ENST00000222399 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
LAMB1-201ENST00000222399 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
LAMB1-201ENST00000222399 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
LAMB1-201ENST00000222399 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
LAMB1-201ENST00000222399 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
LAMB1-201ENST00000222399 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
LAMB1-201ENST00000222399 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
LAMB1-201ENST00000222399 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
LAMB1-201ENST00000222399 USH2AO75445 5202 aa3.18□□□□□ -1.9
LAMB1-201ENST00000222399 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
LAMB1-201ENST00000222399 NEBP20929 6669 aa3.12□□□□□ -1.91
LAMB1-201ENST00000222399 KMT2DO14686 5537 aa3.11□□□□□ -1.91
LAMB1-201ENST00000222399 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
LAMB1-201ENST00000222399 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
LAMB1-201ENST00000222399 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
LAMB1-201ENST00000222399 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
LAMB1-201ENST00000222399 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
LAMB1-201ENST00000222399 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
LAMB1-201ENST00000222399 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
LAMB1-201ENST00000222399 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
LAMB1-201ENST00000222399 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
LAMB1-201ENST00000222399 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
LAMB1-201ENST00000222399 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
LAMB1-201ENST00000222399 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
LAMB1-201ENST00000222399 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
LAMB1-201ENST00000222399 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
LAMB1-201ENST00000222399 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
LAMB1-201ENST00000222399 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
LAMB1-201ENST00000222399 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
LAMB1-201ENST00000222399 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
LAMB1-201ENST00000222399 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
LAMB1-201ENST00000222399 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
LAMB1-201ENST00000222399 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
LAMB1-201ENST00000222399 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
LAMB1-201ENST00000222399 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
LAMB1-201ENST00000222399 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
LAMB1-201ENST00000222399 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
LAMB1-201ENST00000222399 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
LAMB1-201ENST00000222399 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
LAMB1-201ENST00000222399 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
LAMB1-201ENST00000222399 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.13
LAMB1-201ENST00000222399 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
LAMB1-201ENST00000222399 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 437.3 ms