RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 MT4P47944 62 aa4□□□□□ -1.77
DDX17-201ENST00000216019 KRTAP9-2Q9BYQ4 174 aa3.96□□□□□ -1.78
DDX17-201ENST00000216019 EPPK1P58107 5090 aaKnown RBP3.94□□□□□ -1.78
DDX17-201ENST00000216019 MT3P25713 68 aa3.93□□□□□ -1.78
DDX17-201ENST00000216019 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
DDX17-201ENST00000216019 PRM1P04553 51 aa3.89□□□□□ -1.79
DDX17-201ENST00000216019 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
DDX17-201ENST00000216019 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.79
DDX17-201ENST00000216019 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
DDX17-201ENST00000216019 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
DDX17-201ENST00000216019 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
DDX17-201ENST00000216019 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
DDX17-201ENST00000216019 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
DDX17-201ENST00000216019 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
DDX17-201ENST00000216019 MT1AP04731 61 aa3.75□□□□□ -1.81
DDX17-201ENST00000216019 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
DDX17-201ENST00000216019 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
DDX17-201ENST00000216019 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
DDX17-201ENST00000216019 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
DDX17-201ENST00000216019 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
DDX17-201ENST00000216019 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
DDX17-201ENST00000216019 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
DDX17-201ENST00000216019 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
DDX17-201ENST00000216019 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
DDX17-201ENST00000216019 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
DDX17-201ENST00000216019 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
DDX17-201ENST00000216019 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
DDX17-201ENST00000216019 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
DDX17-201ENST00000216019 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
DDX17-201ENST00000216019 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
DDX17-201ENST00000216019 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
DDX17-201ENST00000216019 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
DDX17-201ENST00000216019 MUC2Q02817 5179 aa3.48□□□□□ -1.85
DDX17-201ENST00000216019 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
DDX17-201ENST00000216019 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
DDX17-201ENST00000216019 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
DDX17-201ENST00000216019 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
DDX17-201ENST00000216019 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
DDX17-201ENST00000216019 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
DDX17-201ENST00000216019 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
DDX17-201ENST00000216019 USH2AO75445 5202 aa3.12□□□□□ -1.91
DDX17-201ENST00000216019 KMT2DO14686 5537 aa3.1□□□□□ -1.91
DDX17-201ENST00000216019 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
DDX17-201ENST00000216019 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
DDX17-201ENST00000216019 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
DDX17-201ENST00000216019 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
DDX17-201ENST00000216019 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
DDX17-201ENST00000216019 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
DDX17-201ENST00000216019 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
DDX17-201ENST00000216019 NEBP20929 6669 aa2.94□□□□□ -1.94
DDX17-201ENST00000216019 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
DDX17-201ENST00000216019 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
DDX17-201ENST00000216019 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
DDX17-201ENST00000216019 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
DDX17-201ENST00000216019 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
DDX17-201ENST00000216019 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
DDX17-201ENST00000216019 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
DDX17-201ENST00000216019 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
DDX17-201ENST00000216019 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
DDX17-201ENST00000216019 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
DDX17-201ENST00000216019 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
DDX17-201ENST00000216019 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
DDX17-201ENST00000216019 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
DDX17-201ENST00000216019 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
DDX17-201ENST00000216019 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
DDX17-201ENST00000216019 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
DDX17-201ENST00000216019 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
DDX17-201ENST00000216019 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
DDX17-201ENST00000216019 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
DDX17-201ENST00000216019 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
DDX17-201ENST00000216019 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
DDX17-201ENST00000216019 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
DDX17-201ENST00000216019 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
DDX17-201ENST00000216019 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
DDX17-201ENST00000216019 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
DDX17-201ENST00000216019 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
DDX17-201ENST00000216019 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
DDX17-201ENST00000216019 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms