RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Ighv1-74A0A0G2JGK2 117 aa8.71□□□□□ -1.01
Col6a4-201ENSMUST00000121963 Chac1Q8R3J5 223 aa8.71□□□□□ -1.01
Col6a4-201ENSMUST00000121963 Trbv1A0A0B4J1G7 116 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tmem170aQ9D342 144 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Trav9-2A0A075B647 113 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Trav9-4A0A0B4J1K2 113 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Mesp2O08574 370 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Pip4p1Q3TWL2 284 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tmem241Q3UME2 297 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Trav9d-3A0A075B695 113 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Arhgap21Q6DFV3 1944 aa8.71□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Rs1Q9Z1L4 224 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Rif1Q6PR54 2419 aaKnown RBP8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Igkv9-123A0A140T8N8 117 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Otx1P80205 355 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Mogat1Q91ZV4 335 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Pnrc2Q9CR73 140 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ss18l2Q9D174 77 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Fam216aQ9DB54 251 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Gm10767Q3TQP0 103 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 PtprqP0C5E4 2300 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 SbsponQ3UPR9 264 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Spag11Q8K4N2 71 aa8.7□□□□□ -1.02
Col6a4-201ENSMUST00000121963 OtorQ9JIE3 128 aa8.69□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Isg15Q64339 161 aaKnown RBP8.69□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Morn3Q8C5T4 241 aa8.69□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Plac1Q9JI83 173 aa8.69□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Shisa9Q9CZN4 424 aa8.69□□□□□ -1.02
Col6a4-201ENSMUST00000121963 RhohQ9D3G9 191 aa8.69□□□□□ -1.02
Col6a4-201ENSMUST00000121963 1110002E22RikE0CYV9 1786 aa8.69□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Igkv3-3A0A140T8Q0 119 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Hoxb4P10284 250 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 OstcQ78XF5 149 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Parp4E9PYK3 1969 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Igkv1-122A0A140T8M9 119 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Igkv8-21A0A140T8P7 120 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Gm10604Q3V0X7 143 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Fstl3Q9EQC7 256 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ube2d1P61080 147 aaKnown RBP8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ighv12-3A0A075B5T1 117 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ca1P13634 261 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Plpp2Q9DAX2 276 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 PpyP10601 100 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ighv1-76A0A0G2JFE9 117 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Trav9d-4A0A0G2JG37 103 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Defb10Q8R2I8 73 aa8.68□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Igkv6-15A0A140T8M5 115 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Klf11Q8K1S5 502 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Trav14n-2A0A0G2JDF5 121 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 KprpB2RUR4 657 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tm2d2Q8R0I4 213 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ighv1-52A0A0A6YXC3 117 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Inafm2A0A1L1STD6 152 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Lypd1Q8BLC3 141 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tm4sf20Q9CQY8 226 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Olfr484Q8VFD3 321 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Plekhb2Q9QZC7 221 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Dcaf12l1Q8CBW4 501 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Srp19Q9D7A6 144 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Gm15294V9GXA7 121 aa8.67□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Rnase1P00683 149 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Shisa2Q8QZV2 295 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Trav4-2A0A075B638 110 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Trav6n-6A0A075B6B2 114 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 1700031F05RikB1AX30 191 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Defa27F2Z403 93 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Gm12169F2Z474 250 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ccdc179J3QM76 67 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Higd1bQ99JY6 98 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Cox7b2Q9D2H1 82 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tanc2A2A690 1994 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 A730015C16RikQ8C992 119 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Atp6v0e2Q91XE7 81 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tmem190Q9D2E9 166 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Jmjd1cQ69ZK6 2350 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Gm20517G3UVU6 152 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Zfp11P10751 647 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tnfrsf26P83626 204 aa8.66□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Pde6hP61249 83 aa8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Mgst3Q9CPU4 153 aa8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 March3Q8BRX9 218 aa8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ighv1-36A0A0A6YXT2 117 aa8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Ighv1-64A0A075B5X3 117 aa8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 BlcapP62951 87 aa8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Anapc13Q8R034 74 aa8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Rnf138Q9CQE0 245 aaKnown RBP8.65□□□□□ -1.02
Col6a4-201ENSMUST00000121963 Tm4sf19E9Q9H8 206 aa8.65□□□□□ -1.03
Col6a4-201ENSMUST00000121963 CrygsO35486 178 aa8.65□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Trbv3A0A0A6YYE2 117 aa8.65□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Gm10251J3QPM5 127 aa8.65□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Bex1Q9R224 128 aa8.65□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Pcsk5Q04592 1877 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Zfp951A0A087WRH0 451 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 P01788 123 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Ypel3P61237 119 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 A530064D06RikQ8BNV8 229 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Fam216bQ8CC14 138 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 Plxna2P70207 1894 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 SpinklQ8CEK3 90 aa8.64□□□□□ -1.03
Col6a4-201ENSMUST00000121963 P01739 132 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms