RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 TctaQ8VEA7 122 aa8.9□□□□□ -0.98
Topbp1-201ENSMUST00000035164 Rtl10D3YWW5 146 aa8.9□□□□□ -0.98
Topbp1-201ENSMUST00000035164 CntfrO88507 372 aa8.9□□□□□ -0.98
Topbp1-201ENSMUST00000035164 Tdgf1P51865 171 aa8.9□□□□□ -0.98
Topbp1-201ENSMUST00000035164 Dlx6P70397 175 aa8.9□□□□□ -0.98
Topbp1-201ENSMUST00000035164 Trav14-2A0A075B694 121 aa8.9□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Gm9920D3YVZ2 140 aa8.9□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ifitm2Q99J93 144 aa8.9□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Snrnp40Q6PE01 358 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Lypd8Q9D7S0 255 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Rab9aQ9R0M6 201 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ighv1-81A0A075B5Y4 117 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Fam110aQ8R184 296 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ighv1-55A0A075B5W6 117 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Zfp119aQ9JIC0 545 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Col4a2P08122 1707 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Prb1Q91X93 504 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 RelnQ60841 3461 aa8.89□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P01741 114 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Gm1968Q3T9I3 115 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 BC106179Q8C9L1 186 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Igkv4-81A0A0G2JEY5 119 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P01756 117 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P01757 117 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ighv3-6P18531 116 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Tcl1b4P56844 120 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Runx1Q03347 451 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 CrygcQ61597 174 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Bahcc1Q3UHR0 2643 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Igkv4-90A0A075B5L3 117 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 AdipoqQ60994 247 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 C330021F23RikQ8C7T0 141 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Chd8Q09XV5 2582 aaKnown RBP8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P01649 108 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 NdpP48744 131 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Gm1553Q66VB7 94 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Cox11Q6P8I6 275 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Srsf1Q6PDM2 248 aaKnown RBP8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 AY761184Q9D848 116 aa8.88□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Gm35549A0A0N4SUS7 141 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P01896 185 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ptpn13Q64512 2453 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Plac1Q9JI83 173 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ins2P01326 110 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Prss29Q99MS4 279 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Trav7n-5A0A075B604 112 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ccl12Q62401 104 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Klhdc1Q80YG3 406 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Gpr82Q8BZR0 328 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Rasl10aQ8K5A4 203 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Gm6812B1AXU1 112 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 1700020N15RikL7MTX3 112 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ifitm10Q8BR26 201 aa8.87□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Scgb1b24B1B0N6 92 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ly6lH3BJG9 140 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 AamdcQ8R0P4 122 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Wisp2Q9Z0G4 251 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Vamp8O70404 101 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Trav3-1Q5R1I8 114 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Fbxl15Q91W61 300 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Mrpl36Q99N90 102 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P06334 169 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Olfr312Q7TRZ9 308 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Lypd1Q8BLC3 141 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ly6g6dQ9Z1Q3 135 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Umad1E0CX23 159 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Olfr553Q7TRS6 326 aa8.86□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Esp24A8R0V6 68 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 1700067P10RikG3X8U2 183 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Tpsg1Q9QUL7 311 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 CompQ9R0G6 755 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Psmg4P0C7N9 123 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Olfr1209Q3SXJ3 310 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ttc9cQ810A3 171 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ovol1Q9WTJ2 267 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Fgf6P21658 208 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 OtosQ8R448 89 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Igkv2-137A0A0B4J1H6 120 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 ElaneQ3UP87 265 aa8.85□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ighv1-31A0A0A6YWK5 117 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Zfp248Q640N4 576 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Atp6v0bQ91V37 205 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ighv1-37A0A0A6YW32 117 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P04943 107 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Hbb-bsA8DUK4 147 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P01811 117 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Hbb-b1P02088 147 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 P06330 118 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Q4KKZ1 196 aa8.84□□□□□ -0.99
Topbp1-201ENSMUST00000035164 Ighv14-1A0A075B5R4 117 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 Iglc1A0A0G2JE99 106 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 Obp2bA2BHR0 176 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 Gm28038F7BCN9 126 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 Ighv1-62-3P01754 117 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 P01801 115 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 P01843 105 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 Fam24aQ8CF27 98 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 Pygo1Q9D0P5 417 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 CtrlQ9ER05 264 aa8.83□□□□□ -1
Topbp1-201ENSMUST00000035164 Trbv13-1A0A0B4J1P8 112 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 128.5 ms