RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Trav16nA0A075B634 117 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Ighv3-3A0A0A6YWL2 116 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Gm765B2RVL9 189 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Tpt1P63028 172 aaKnown RBP10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 4933415F23RikQ14BX6 153 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Smim9Q3V0X1 137 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Defb42Q8BVB5 75 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 4930474N05RikQ8BVR5 218 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Olfr1295Q8VF48 312 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Klk11Q9QYN3 276 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Pla2g1bQ9Z0Y2 146 aa10.74□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Ighv1-75A0A075B5Y2 117 aa10.73□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Spink2Q8BMY7 86 aa10.73□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Vmn1r216Q8R257 298 aa10.73□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Crip2Q9DCT8 208 aaKnown RBP10.73□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Plekhb2Q9QZC7 221 aa10.73□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Rabac1Q9Z0S9 185 aa10.73□□□□□ -0.69
Ercc1-201ENSMUST00000003645 TnxbO35452 4006 aa10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 TcapO70548 167 aa10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Foxh1O88621 401 aa10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Acrv1P50289 261 aa10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Rpl19P84099 196 aaKnown RBP10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Slc17a2Q5SZA1 478 aa10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Mrpl35Q9CQL6 188 aa10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Cml3Q9JIY8 226 aa10.72□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Trav7-4A0A075B6C1 113 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Ighv8-4A0A0A6YW26 117 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Olfr1118A0A0J9YUE7 307 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Nkx6-2D3Z4R4 277 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Gm5218F6YH22 154 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Gm15056F6ZR08 88 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 1810062G17RikG3X8Y2 129 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Spink11Q09TK7 88 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Defa24Q5G865 93 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Trav7d-4Q5R1H9 113 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Q9D7E4 109 aa10.71□□□□□ -0.69
Ercc1-201ENSMUST00000003645 Brwd1Q921C3 2304 aa10.71□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Trav19A0A0B4J1K4 119 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 1520401A03RikA0A0J9YVH6 598 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gm12845A0A0N4SUM5 588 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Defa34D3Z0J0 93 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gm21874J3QNZ6 232 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Defa37K9J724 93 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Twist1P26687 206 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Defa5P28312 93 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Pfn1P62962 140 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Rhox4eQ504P9 205 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Znf740Q6NZQ6 180 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Vsig8Q6P3A4 417 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Fam210aQ8BGY7 273 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Tmed6Q9CQG0 239 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Fmc1Q9CR13 113 aa10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 ChtopQ9CY57 249 aaKnown RBP10.7□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Scgb1b29D2XZ31 93 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Scgb1b20E9PWZ2 93 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gm10203F6QJ09 66 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 P01747 120 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gata3P23772 443 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Rps20P60867 119 aaKnown RBP10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Cbln2Q8BGU2 224 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Olfr1339Q8VGB1 315 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Fam103a1Q9CQY2 119 aaKnown RBP10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Smco4Q9JIS3 59 aa10.69□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Trav14n-3A0A075B645 120 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Ighv1-23A0A0A6YVW3 117 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gm3618D3Z4P5 127 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 6430550D23RikE9Q1X6 194 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Phxr5P08399 672 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 PigyP0C1P0 71 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 AsipQ03288 131 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Zcwpw2Q08EN7 125 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Ypel4Q65Z93 127 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gm10334Q792Y8 246 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Olfr1367Q8VFG2 316 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gm2916Q9D9B9 127 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Clec5aQ9R007 190 aa10.68□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Bloc1s1O55102 125 aa10.67□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Ndufa4l2Q4FZG9 87 aa10.67□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Mrpl53Q9D1H8 118 aaKnown RBP10.67□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Trav7n-4A0A075B620 113 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Sub1P11031 127 aaKnown RBP10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 CtsgP28293 261 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Atp5iQ06185 71 aaKnown RBP10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Cmc4Q61908 68 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Olfr498Q8VEW2 330 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Mrpl20Q9CQL4 149 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Lhfpl3Q9CTN8 222 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Q9D8Q6 235 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Npc2Q9Z0J0 149 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Rgs21V9GXQ3 152 aa10.66□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Ms4a12A0A087WSB9 263 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Igkv4-68A0A0B4J1I7 117 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 4930447F04RikA2AFR2 126 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Mbd3l2Q3UXB0 228 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 MycbQ6P8Z1 170 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Gtsf1lQ9CWD0 151 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Hcfc2Q9D968 241 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Rs1Q9Z1L4 224 aa10.65□□□□□ -0.7
Ercc1-201ENSMUST00000003645 Scgb1b12A0A087WP21 93 aa10.65□□□□□ -0.71
Ercc1-201ENSMUST00000003645 P06328 117 aa10.65□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms