RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 A6NED7 52 aa5.56□□□□□ -1.52
CASC19-230ENST00000641421 TPRXLQ17RH7 258 aa5.56□□□□□ -1.52
CASC19-230ENST00000641421 SPTSSBQ8NFR3 76 aa5.56□□□□□ -1.52
CASC19-230ENST00000641421 A0A1B0GU69 56 aa5.54□□□□□ -1.52
CASC19-230ENST00000641421 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
CASC19-230ENST00000641421 LCA10Q71F78 164 aa5.48□□□□□ -1.53
CASC19-230ENST00000641421 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
CASC19-230ENST00000641421 A8MU10 97 aa5.47□□□□□ -1.53
CASC19-230ENST00000641421 SEC61GP60059 68 aa5.47□□□□□ -1.53
CASC19-230ENST00000641421 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
CASC19-230ENST00000641421 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
CASC19-230ENST00000641421 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
CASC19-230ENST00000641421 UQCR11O14957 56 aa5.4□□□□□ -1.54
CASC19-230ENST00000641421 S4R3F8 94 aa5.39□□□□□ -1.55
CASC19-230ENST00000641421 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
CASC19-230ENST00000641421 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
CASC19-230ENST00000641421 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
CASC19-230ENST00000641421 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
CASC19-230ENST00000641421 HERC2O95714 4834 aa5.37□□□□□ -1.55
CASC19-230ENST00000641421 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
CASC19-230ENST00000641421 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
CASC19-230ENST00000641421 RBM12B-AS1Q9P1G2 102 aa5.37□□□□□ -1.55
CASC19-230ENST00000641421 PMAIP1Q13794 54 aa5.34□□□□□ -1.55
CASC19-230ENST00000641421 ABCA13Q86UQ4 5058 aa5.34□□□□□ -1.55
CASC19-230ENST00000641421 LRP2P98164 4655 aa5.32□□□□□ -1.56
CASC19-230ENST00000641421 A0A1B0GU33 70 aa5.32□□□□□ -1.56
CASC19-230ENST00000641421 LPAP08519 4548 aa5.31□□□□□ -1.56
CASC19-230ENST00000641421 A6NN06 94 aa5.28□□□□□ -1.56
CASC19-230ENST00000641421 H0YAA0 97 aa5.26□□□□□ -1.57
CASC19-230ENST00000641421 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
CASC19-230ENST00000641421 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
CASC19-230ENST00000641421 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
CASC19-230ENST00000641421 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
CASC19-230ENST00000641421 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
CASC19-230ENST00000641421 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
CASC19-230ENST00000641421 MUC17Q685J3 4493 aa5.18□□□□□ -1.58
CASC19-230ENST00000641421 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
CASC19-230ENST00000641421 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
CASC19-230ENST00000641421 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
CASC19-230ENST00000641421 P0C880 135 aa5.17□□□□□ -1.58
CASC19-230ENST00000641421 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
CASC19-230ENST00000641421 KRTAP19-2Q3LHN2 52 aa5.13□□□□□ -1.59
CASC19-230ENST00000641421 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
CASC19-230ENST00000641421 K7ERS5 55 aa5.1□□□□□ -1.59
CASC19-230ENST00000641421 A0A0D9SG42 100 aa5.08□□□□□ -1.6
CASC19-230ENST00000641421 M0QZ58 72 aa5.06□□□□□ -1.6
CASC19-230ENST00000641421 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
CASC19-230ENST00000641421 HERC1Q15751 4861 aa5.03□□□□□ -1.6
CASC19-230ENST00000641421 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
CASC19-230ENST00000641421 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
CASC19-230ENST00000641421 PRAC1Q96KF2 57 aa5□□□□□ -1.61
CASC19-230ENST00000641421 R4GN34 69 aa4.97□□□□□ -1.61
CASC19-230ENST00000641421 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
CASC19-230ENST00000641421 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
CASC19-230ENST00000641421 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
CASC19-230ENST00000641421 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
CASC19-230ENST00000641421 ROMO1P60602 79 aa4.92□□□□□ -1.62
CASC19-230ENST00000641421 LINC01554Q52M75 96 aa4.92□□□□□ -1.62
CASC19-230ENST00000641421 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
CASC19-230ENST00000641421 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
CASC19-230ENST00000641421 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
CASC19-230ENST00000641421 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
CASC19-230ENST00000641421 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
CASC19-230ENST00000641421 M0R2T5 61 aa4.82□□□□□ -1.64
CASC19-230ENST00000641421 MT1HP80294 61 aa4.82□□□□□ -1.64
CASC19-230ENST00000641421 MUC2Q02817 5179 aa4.8□□□□□ -1.64
CASC19-230ENST00000641421 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
CASC19-230ENST00000641421 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
CASC19-230ENST00000641421 MT2AP02795 61 aa4.69□□□□□ -1.66
CASC19-230ENST00000641421 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
CASC19-230ENST00000641421 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
CASC19-230ENST00000641421 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
CASC19-230ENST00000641421 MT1FP04733 61 aa4.67□□□□□ -1.66
CASC19-230ENST00000641421 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
CASC19-230ENST00000641421 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
CASC19-230ENST00000641421 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
CASC19-230ENST00000641421 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
CASC19-230ENST00000641421 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
CASC19-230ENST00000641421 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
CASC19-230ENST00000641421 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
CASC19-230ENST00000641421 TNP1P09430 55 aa4.5□□□□□ -1.69
CASC19-230ENST00000641421 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
CASC19-230ENST00000641421 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CASC19-230ENST00000641421 MT1BP07438 61 aa4.46□□□□□ -1.69
CASC19-230ENST00000641421 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
CASC19-230ENST00000641421 H3BS24 57 aa4.36□□□□□ -1.71
CASC19-230ENST00000641421 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
CASC19-230ENST00000641421 MT1XP80297 61 aa4.36□□□□□ -1.71
CASC19-230ENST00000641421 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
CASC19-230ENST00000641421 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CASC19-230ENST00000641421 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
CASC19-230ENST00000641421 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
CASC19-230ENST00000641421 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
CASC19-230ENST00000641421 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
CASC19-230ENST00000641421 KRTAP10-12P60413 245 aa4.21□□□□□ -1.73
CASC19-230ENST00000641421 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
CASC19-230ENST00000641421 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
CASC19-230ENST00000641421 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
CASC19-230ENST00000641421 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
CASC19-230ENST00000641421 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms