RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
HLA-B-258ENST00000640615 S4R3F8 94 aa4.32□□□□□ -1.72
HLA-B-258ENST00000640615 ATP5EP56381 51 aaPredicted RBP4.3□□□□□ -1.72
HLA-B-258ENST00000640615 MT1HP80294 61 aa4.29□□□□□ -1.72
HLA-B-258ENST00000640615 LCA10Q71F78 164 aa4.29□□□□□ -1.72
HLA-B-258ENST00000640615 CHKB-CPT1BH3BT56 60 aa4.28□□□□□ -1.72
HLA-B-258ENST00000640615 M0R2T5 61 aa4.27□□□□□ -1.73
HLA-B-258ENST00000640615 COA5Q86WW8 74 aa4.27□□□□□ -1.73
HLA-B-258ENST00000640615 KRTAP3-3Q9BYR6 98 aa4.25□□□□□ -1.73
HLA-B-258ENST00000640615 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
HLA-B-258ENST00000640615 CSAG1Q6PB30 78 aa4.24□□□□□ -1.73
HLA-B-258ENST00000640615 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
HLA-B-258ENST00000640615 LORP23490 312 aaPredicted RBP4.21□□□□□ -1.74
HLA-B-258ENST00000640615 SERP1Q9Y6X1 66 aa4.2□□□□□ -1.74
HLA-B-258ENST00000640615 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
HLA-B-258ENST00000640615 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.74
HLA-B-258ENST00000640615 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
HLA-B-258ENST00000640615 ADM2Q7Z4H4 148 aa4.11□□□□□ -1.75
HLA-B-258ENST00000640615 H0YAA0 97 aa4.1□□□□□ -1.75
HLA-B-258ENST00000640615 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
HLA-B-258ENST00000640615 MT2AP02795 61 aa4.09□□□□□ -1.75
HLA-B-258ENST00000640615 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
HLA-B-258ENST00000640615 SEC61GP60059 68 aa4.08□□□□□ -1.76
HLA-B-258ENST00000640615 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
HLA-B-258ENST00000640615 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
HLA-B-258ENST00000640615 A0A1B0GU69 56 aa4.06□□□□□ -1.76
HLA-B-258ENST00000640615 MT1FP04733 61 aa4.06□□□□□ -1.76
HLA-B-258ENST00000640615 P0C880 135 aa4.05□□□□□ -1.76
HLA-B-258ENST00000640615 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
HLA-B-258ENST00000640615 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
HLA-B-258ENST00000640615 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
HLA-B-258ENST00000640615 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
HLA-B-258ENST00000640615 V9GYY9 64 aa4.03□□□□□ -1.76
HLA-B-258ENST00000640615 Q1T7F1 81 aa4.02□□□□□ -1.77
HLA-B-258ENST00000640615 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
HLA-B-258ENST00000640615 PSPHP1O15172 72 aa3.98□□□□□ -1.77
HLA-B-258ENST00000640615 A0A1B0GU33 70 aa3.97□□□□□ -1.77
HLA-B-258ENST00000640615 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
HLA-B-258ENST00000640615 R4GN34 69 aa3.97□□□□□ -1.77
HLA-B-258ENST00000640615 M0QZ58 72 aa3.96□□□□□ -1.78
HLA-B-258ENST00000640615 USH2AO75445 5202 aa3.95□□□□□ -1.78
HLA-B-258ENST00000640615 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
HLA-B-258ENST00000640615 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
HLA-B-258ENST00000640615 Q5VV11 94 aa3.92□□□□□ -1.78
HLA-B-258ENST00000640615 KRTAP19-1Q8IUB9 90 aa3.92□□□□□ -1.78
HLA-B-258ENST00000640615 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
HLA-B-258ENST00000640615 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
HLA-B-258ENST00000640615 LINC01554Q52M75 96 aa3.91□□□□□ -1.78
HLA-B-258ENST00000640615 SPATA8Q6RVD6 105 aa3.91□□□□□ -1.78
HLA-B-258ENST00000640615 LCE2BO14633 110 aa3.9□□□□□ -1.79
HLA-B-258ENST00000640615 UQCR11O14957 56 aa3.89□□□□□ -1.79
HLA-B-258ENST00000640615 A0A0D9SG42 100 aa3.86□□□□□ -1.79
HLA-B-258ENST00000640615 A6NED7 52 aa3.86□□□□□ -1.79
HLA-B-258ENST00000640615 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
HLA-B-258ENST00000640615 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
HLA-B-258ENST00000640615 A8MU10 97 aa3.84□□□□□ -1.79
HLA-B-258ENST00000640615 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
HLA-B-258ENST00000640615 MT1BP07438 61 aa3.8□□□□□ -1.8
HLA-B-258ENST00000640615 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
HLA-B-258ENST00000640615 A6NN06 94 aa3.79□□□□□ -1.8
HLA-B-258ENST00000640615 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
HLA-B-258ENST00000640615 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
HLA-B-258ENST00000640615 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
HLA-B-258ENST00000640615 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
HLA-B-258ENST00000640615 CDC42SE1Q9NRR8 79 aa3.75□□□□□ -1.81
HLA-B-258ENST00000640615 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
HLA-B-258ENST00000640615 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
HLA-B-258ENST00000640615 K7ERS5 55 aa3.72□□□□□ -1.81
HLA-B-258ENST00000640615 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
HLA-B-258ENST00000640615 BRK1Q8WUW1 75 aa3.71□□□□□ -1.82
HLA-B-258ENST00000640615 MT1XP80297 61 aa3.65□□□□□ -1.83
HLA-B-258ENST00000640615 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
HLA-B-258ENST00000640615 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
HLA-B-258ENST00000640615 C10orf95Q9H7T3 257 aa3.57□□□□□ -1.84
HLA-B-258ENST00000640615 NEBP20929 6669 aa3.55□□□□□ -1.84
HLA-B-258ENST00000640615 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
HLA-B-258ENST00000640615 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
HLA-B-258ENST00000640615 ROMO1P60602 79 aa3.52□□□□□ -1.85
HLA-B-258ENST00000640615 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
HLA-B-258ENST00000640615 TNP1P09430 55 aa3.5□□□□□ -1.85
HLA-B-258ENST00000640615 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
HLA-B-258ENST00000640615 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
HLA-B-258ENST00000640615 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
HLA-B-258ENST00000640615 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
HLA-B-258ENST00000640615 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
HLA-B-258ENST00000640615 KMT2DO14686 5537 aa3.43□□□□□ -1.86
HLA-B-258ENST00000640615 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
HLA-B-258ENST00000640615 KRTAP4-8A0A0G2JLE6 195 aa3.41□□□□□ -1.86
HLA-B-258ENST00000640615 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
HLA-B-258ENST00000640615 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
HLA-B-258ENST00000640615 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
HLA-B-258ENST00000640615 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
HLA-B-258ENST00000640615 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
HLA-B-258ENST00000640615 KRTAP23-1A1A580 65 aa3.33□□□□□ -1.88
HLA-B-258ENST00000640615 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
HLA-B-258ENST00000640615 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
HLA-B-258ENST00000640615 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
HLA-B-258ENST00000640615 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
HLA-B-258ENST00000640615 SPRR2EP22531 72 aa3.27□□□□□ -1.89
HLA-B-258ENST00000640615 SPRR2BP35325 72 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms