RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.39
PAX6-258ENST00000639548 LPAP08519 4548 aa6.39□□□□□ -1.39
PAX6-258ENST00000639548 Q5VV11 94 aa6.38□□□□□ -1.39
PAX6-258ENST00000639548 PSPHP1O15172 72 aa6.37□□□□□ -1.39
PAX6-258ENST00000639548 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
PAX6-258ENST00000639548 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
PAX6-258ENST00000639548 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
PAX6-258ENST00000639548 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
PAX6-258ENST00000639548 PRO0628Q9UI54 55 aa6.3□□□□□ -1.4
PAX6-258ENST00000639548 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
PAX6-258ENST00000639548 MUC2Q02817 5179 aa6.26□□□□□ -1.41
PAX6-258ENST00000639548 A0A1B0GU69 56 aa6.25□□□□□ -1.41
PAX6-258ENST00000639548 A6NED7 52 aa6.2□□□□□ -1.42
PAX6-258ENST00000639548 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
PAX6-258ENST00000639548 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
PAX6-258ENST00000639548 SEC61GP60059 68 aa6.17□□□□□ -1.42
PAX6-258ENST00000639548 LCA10Q71F78 164 aa6.15□□□□□ -1.43
PAX6-258ENST00000639548 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
PAX6-258ENST00000639548 UQCR11O14957 56 aa6.13□□□□□ -1.43
PAX6-258ENST00000639548 RBM12B-AS1Q9P1G2 102 aa6.13□□□□□ -1.43
PAX6-258ENST00000639548 S4R3F8 94 aa6.12□□□□□ -1.43
PAX6-258ENST00000639548 SPATA8Q6RVD6 105 aa6.1□□□□□ -1.43
PAX6-258ENST00000639548 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
PAX6-258ENST00000639548 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
PAX6-258ENST00000639548 A8MU10 97 aa6.06□□□□□ -1.44
PAX6-258ENST00000639548 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
PAX6-258ENST00000639548 A0A1B0GU33 70 aa6□□□□□ -1.45
PAX6-258ENST00000639548 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
PAX6-258ENST00000639548 CSAG1Q6PB30 78 aa5.97□□□□□ -1.45
PAX6-258ENST00000639548 KRTAP4-1Q9BYQ7 146 aa5.97□□□□□ -1.45
PAX6-258ENST00000639548 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
PAX6-258ENST00000639548 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
PAX6-258ENST00000639548 H0YAA0 97 aa5.95□□□□□ -1.46
PAX6-258ENST00000639548 A6NN06 94 aa5.93□□□□□ -1.46
PAX6-258ENST00000639548 KRTAP19-2Q3LHN2 52 aa5.92□□□□□ -1.46
PAX6-258ENST00000639548 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
PAX6-258ENST00000639548 P0C880 135 aa5.83□□□□□ -1.48
PAX6-258ENST00000639548 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
PAX6-258ENST00000639548 KTN1-AS1Q86SY8 53 aa5.81□□□□□ -1.48
PAX6-258ENST00000639548 M0QZ58 72 aa5.8□□□□□ -1.48
PAX6-258ENST00000639548 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
PAX6-258ENST00000639548 K7ERS5 55 aa5.76□□□□□ -1.49
PAX6-258ENST00000639548 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.49
PAX6-258ENST00000639548 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
PAX6-258ENST00000639548 MT1HP80294 61 aa5.66□□□□□ -1.5
PAX6-258ENST00000639548 A0A0D9SG42 100 aa5.64□□□□□ -1.51
PAX6-258ENST00000639548 R4GN34 69 aa5.64□□□□□ -1.51
PAX6-258ENST00000639548 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
PAX6-258ENST00000639548 KRTAP12-1P59990 96 aa5.61□□□□□ -1.51
PAX6-258ENST00000639548 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
PAX6-258ENST00000639548 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
PAX6-258ENST00000639548 KRTAP12-2P59991 146 aa5.57□□□□□ -1.52
PAX6-258ENST00000639548 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
PAX6-258ENST00000639548 ROMO1P60602 79 aa5.54□□□□□ -1.52
PAX6-258ENST00000639548 M0R2T5 61 aa5.51□□□□□ -1.53
PAX6-258ENST00000639548 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
PAX6-258ENST00000639548 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
PAX6-258ENST00000639548 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
PAX6-258ENST00000639548 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
PAX6-258ENST00000639548 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
PAX6-258ENST00000639548 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
PAX6-258ENST00000639548 MT2AP02795 61 aa5.36□□□□□ -1.55
PAX6-258ENST00000639548 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
PAX6-258ENST00000639548 MT1FP04733 61 aa5.32□□□□□ -1.56
PAX6-258ENST00000639548 USH2AO75445 5202 aa5.31□□□□□ -1.56
PAX6-258ENST00000639548 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
PAX6-258ENST00000639548 KRTAP10-10P60014 251 aa5.3□□□□□ -1.56
PAX6-258ENST00000639548 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
PAX6-258ENST00000639548 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
PAX6-258ENST00000639548 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
PAX6-258ENST00000639548 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
PAX6-258ENST00000639548 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
PAX6-258ENST00000639548 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
PAX6-258ENST00000639548 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
PAX6-258ENST00000639548 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
PAX6-258ENST00000639548 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
PAX6-258ENST00000639548 H3BS24 57 aa5.14□□□□□ -1.59
PAX6-258ENST00000639548 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
PAX6-258ENST00000639548 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
PAX6-258ENST00000639548 MT1BP07438 61 aa5.12□□□□□ -1.59
PAX6-258ENST00000639548 TNP1P09430 55 aa5.11□□□□□ -1.59
PAX6-258ENST00000639548 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
PAX6-258ENST00000639548 MACF1Q9UPN3 7388 aaKnown RBP5.08□□□□□ -1.6
PAX6-258ENST00000639548 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
PAX6-258ENST00000639548 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
PAX6-258ENST00000639548 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
PAX6-258ENST00000639548 MT1XP80297 61 aa4.98□□□□□ -1.61
PAX6-258ENST00000639548 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
PAX6-258ENST00000639548 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
PAX6-258ENST00000639548 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
PAX6-258ENST00000639548 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
PAX6-258ENST00000639548 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
PAX6-258ENST00000639548 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
PAX6-258ENST00000639548 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
PAX6-258ENST00000639548 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
PAX6-258ENST00000639548 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
PAX6-258ENST00000639548 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
PAX6-258ENST00000639548 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
PAX6-258ENST00000639548 NEBP20929 6669 aa4.75□□□□□ -1.65
PAX6-258ENST00000639548 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms