RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 COA5Q86WW8 74 aa7.82□□□□□ -1.16
CLN6-219ENST00000637329 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
CLN6-219ENST00000637329 KRTAP4-1Q9BYQ7 146 aa7.79□□□□□ -1.16
CLN6-219ENST00000637329 KRTAP3-1Q9BYR8 98 aa7.79□□□□□ -1.16
CLN6-219ENST00000637329 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
CLN6-219ENST00000637329 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
CLN6-219ENST00000637329 SMIM26A0A096LP01 95 aa7.67□□□□□ -1.18
CLN6-219ENST00000637329 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
CLN6-219ENST00000637329 S4R3F8 94 aa7.65□□□□□ -1.18
CLN6-219ENST00000637329 KRTAP19-2Q3LHN2 52 aa7.62□□□□□ -1.19
CLN6-219ENST00000637329 LCA10Q71F78 164 aa7.59□□□□□ -1.19
CLN6-219ENST00000637329 V9GYY9 64 aa7.58□□□□□ -1.2
CLN6-219ENST00000637329 Q1T7F1 81 aa7.55□□□□□ -1.2
CLN6-219ENST00000637329 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
CLN6-219ENST00000637329 LINC01558Q9Y6Z2 57 aa7.51□□□□□ -1.21
CLN6-219ENST00000637329 FLGP20930 4061 aaPredicted RBP7.48□□□□□ -1.21
CLN6-219ENST00000637329 CSAG1Q6PB30 78 aa7.47□□□□□ -1.21
CLN6-219ENST00000637329 KRTAP9-7A8MTY7 169 aa7.46□□□□□ -1.22
CLN6-219ENST00000637329 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
CLN6-219ENST00000637329 PRR15LQ9BU68 103 aa7.43□□□□□ -1.22
CLN6-219ENST00000637329 SEC61GP60059 68 aa7.41□□□□□ -1.22
CLN6-219ENST00000637329 A0A1B0GU69 56 aa7.4□□□□□ -1.22
CLN6-219ENST00000637329 H0YAA0 97 aa7.38□□□□□ -1.23
CLN6-219ENST00000637329 PSPHP1O15172 72 aa7.35□□□□□ -1.23
CLN6-219ENST00000637329 MT1HP80294 61 aa7.33□□□□□ -1.24
CLN6-219ENST00000637329 Q5VV11 94 aa7.33□□□□□ -1.24
CLN6-219ENST00000637329 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
CLN6-219ENST00000637329 ADM2Q7Z4H4 148 aa7.25□□□□□ -1.25
CLN6-219ENST00000637329 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
CLN6-219ENST00000637329 M0R2T5 61 aa7.24□□□□□ -1.25
CLN6-219ENST00000637329 KRTAP10-6P60371 365 aaPredicted RBP7.24□□□□□ -1.25
CLN6-219ENST00000637329 A0A1B0GU33 70 aa7.19□□□□□ -1.26
CLN6-219ENST00000637329 UQCR11O14957 56 aa7.19□□□□□ -1.26
CLN6-219ENST00000637329 P0C880 135 aa7.18□□□□□ -1.26
CLN6-219ENST00000637329 A6NED7 52 aa7.17□□□□□ -1.26
CLN6-219ENST00000637329 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
CLN6-219ENST00000637329 M0QZ58 72 aa7.08□□□□□ -1.28
CLN6-219ENST00000637329 MIR22HGQ0VDD5 57 aa7.08□□□□□ -1.28
CLN6-219ENST00000637329 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
CLN6-219ENST00000637329 CDC42SE1Q9NRR8 79 aa7.07□□□□□ -1.28
CLN6-219ENST00000637329 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
CLN6-219ENST00000637329 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
CLN6-219ENST00000637329 R4GN34 69 aa7.04□□□□□ -1.28
CLN6-219ENST00000637329 MT2AP02795 61 aa7.03□□□□□ -1.28
CLN6-219ENST00000637329 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
CLN6-219ENST00000637329 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
CLN6-219ENST00000637329 MT1FP04733 61 aa6.97□□□□□ -1.29
CLN6-219ENST00000637329 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
CLN6-219ENST00000637329 SSPOA2VEC9 5147 aa6.92□□□□□ -1.3
CLN6-219ENST00000637329 USH2AO75445 5202 aa6.91□□□□□ -1.3
CLN6-219ENST00000637329 A8MU10 97 aa6.9□□□□□ -1.3
CLN6-219ENST00000637329 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
CLN6-219ENST00000637329 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
CLN6-219ENST00000637329 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
CLN6-219ENST00000637329 PRO0628Q9UI54 55 aa6.88□□□□□ -1.31
CLN6-219ENST00000637329 A0A0D9SG42 100 aa6.87□□□□□ -1.31
CLN6-219ENST00000637329 A6NN06 94 aa6.86□□□□□ -1.31
CLN6-219ENST00000637329 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
CLN6-219ENST00000637329 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
CLN6-219ENST00000637329 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
CLN6-219ENST00000637329 K7ERS5 55 aa6.82□□□□□ -1.32
CLN6-219ENST00000637329 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
CLN6-219ENST00000637329 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
CLN6-219ENST00000637329 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
CLN6-219ENST00000637329 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
CLN6-219ENST00000637329 SPINT4Q6UDR6 99 aa6.72□□□□□ -1.33
CLN6-219ENST00000637329 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
CLN6-219ENST00000637329 SVIPQ8NHG7 77 aa6.66□□□□□ -1.34
CLN6-219ENST00000637329 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
CLN6-219ENST00000637329 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
CLN6-219ENST00000637329 MT1BP07438 61 aa6.6□□□□□ -1.35
CLN6-219ENST00000637329 LCE2BO14633 110 aa6.58□□□□□ -1.36
CLN6-219ENST00000637329 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
CLN6-219ENST00000637329 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
CLN6-219ENST00000637329 KRTAP19-6Q3LI70 58 aa6.5□□□□□ -1.37
CLN6-219ENST00000637329 ROMO1P60602 79 aa6.49□□□□□ -1.37
CLN6-219ENST00000637329 NEBP20929 6669 aa6.48□□□□□ -1.37
CLN6-219ENST00000637329 KTN1-AS1Q86SY8 53 aa6.4□□□□□ -1.38
CLN6-219ENST00000637329 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
CLN6-219ENST00000637329 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
CLN6-219ENST00000637329 MT1XP80297 61 aa6.37□□□□□ -1.39
CLN6-219ENST00000637329 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
CLN6-219ENST00000637329 MUC12Q9UKN1 5478 aa6.34□□□□□ -1.4
CLN6-219ENST00000637329 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
CLN6-219ENST00000637329 TNP1P09430 55 aa6.27□□□□□ -1.41
CLN6-219ENST00000637329 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
CLN6-219ENST00000637329 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
CLN6-219ENST00000637329 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
CLN6-219ENST00000637329 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
CLN6-219ENST00000637329 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
CLN6-219ENST00000637329 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
CLN6-219ENST00000637329 KRTAP10-7P60409 375 aaPredicted RBP6.08□□□□□ -1.44
CLN6-219ENST00000637329 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
CLN6-219ENST00000637329 KMT2DO14686 5537 aa6.06□□□□□ -1.44
CLN6-219ENST00000637329 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
CLN6-219ENST00000637329 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
CLN6-219ENST00000637329 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
CLN6-219ENST00000637329 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
CLN6-219ENST00000637329 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
CLN6-219ENST00000637329 SPRR2EP22531 72 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms