RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 H3BPC8 53 aa7.02□□□□□ -1.29
HSPG2-214ENST00000635682 KRTAP3-1Q9BYR8 98 aa7.01□□□□□ -1.29
HSPG2-214ENST00000635682 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
HSPG2-214ENST00000635682 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
HSPG2-214ENST00000635682 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
HSPG2-214ENST00000635682 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
HSPG2-214ENST00000635682 LCA10Q71F78 164 aa6.99□□□□□ -1.29
HSPG2-214ENST00000635682 A8MUN3 132 aa6.97□□□□□ -1.29
HSPG2-214ENST00000635682 SMIM20Q8N5G0 67 aa6.97□□□□□ -1.29
HSPG2-214ENST00000635682 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
HSPG2-214ENST00000635682 NDUFC1O43677 76 aa6.93□□□□□ -1.3
HSPG2-214ENST00000635682 KLKP1Q107X0 134 aa6.92□□□□□ -1.3
HSPG2-214ENST00000635682 TRAV7A0A075B6U4 112 aa6.88□□□□□ -1.31
HSPG2-214ENST00000635682 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
HSPG2-214ENST00000635682 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
HSPG2-214ENST00000635682 DMAC1Q96GE9 116 aa6.78□□□□□ -1.32
HSPG2-214ENST00000635682 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
HSPG2-214ENST00000635682 ANAPC13Q9BS18 74 aa6.76□□□□□ -1.33
HSPG2-214ENST00000635682 ACYP2P14621 99 aa6.74□□□□□ -1.33
HSPG2-214ENST00000635682 COX7CP15954 63 aa6.74□□□□□ -1.33
HSPG2-214ENST00000635682 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
HSPG2-214ENST00000635682 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
HSPG2-214ENST00000635682 H0YAA0 97 aa6.71□□□□□ -1.34
HSPG2-214ENST00000635682 SPTSSBQ8NFR3 76 aa6.7□□□□□ -1.34
HSPG2-214ENST00000635682 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
HSPG2-214ENST00000635682 ADM2Q7Z4H4 148 aa6.69□□□□□ -1.34
HSPG2-214ENST00000635682 C20orf197Q8N268 126 aa6.69□□□□□ -1.34
HSPG2-214ENST00000635682 Q5VV11 94 aa6.66□□□□□ -1.34
HSPG2-214ENST00000635682 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
HSPG2-214ENST00000635682 SPANXA2-OT1Q8N9U9 137 aa6.6□□□□□ -1.35
HSPG2-214ENST00000635682 NEBP20929 6669 aa6.59□□□□□ -1.35
HSPG2-214ENST00000635682 A6NN06 94 aa6.57□□□□□ -1.36
HSPG2-214ENST00000635682 R4GN34 69 aa6.57□□□□□ -1.36
HSPG2-214ENST00000635682 MT1BP07438 61 aa6.56□□□□□ -1.36
HSPG2-214ENST00000635682 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
HSPG2-214ENST00000635682 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
HSPG2-214ENST00000635682 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
HSPG2-214ENST00000635682 H7BZZ5 65 aa6.51□□□□□ -1.37
HSPG2-214ENST00000635682 M0QZ58 72 aa6.5□□□□□ -1.37
HSPG2-214ENST00000635682 PCP4P48539 62 aa6.5□□□□□ -1.37
HSPG2-214ENST00000635682 P0C880 135 aa6.48□□□□□ -1.37
HSPG2-214ENST00000635682 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
HSPG2-214ENST00000635682 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
HSPG2-214ENST00000635682 ATP5EP56381 51 aaPredicted RBP6.44□□□□□ -1.38
HSPG2-214ENST00000635682 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
HSPG2-214ENST00000635682 TMEM258P61165 79 aa6.42□□□□□ -1.38
HSPG2-214ENST00000635682 LINC01554Q52M75 96 aa6.42□□□□□ -1.38
HSPG2-214ENST00000635682 COA5Q86WW8 74 aa6.42□□□□□ -1.38
HSPG2-214ENST00000635682 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
HSPG2-214ENST00000635682 SEC61GP60059 68 aa6.38□□□□□ -1.39
HSPG2-214ENST00000635682 KRTAP20-1Q3LI63 56 aa6.37□□□□□ -1.39
HSPG2-214ENST00000635682 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
HSPG2-214ENST00000635682 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
HSPG2-214ENST00000635682 KMT2DO14686 5537 aa6.34□□□□□ -1.39
HSPG2-214ENST00000635682 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
HSPG2-214ENST00000635682 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
HSPG2-214ENST00000635682 A0A1B0GU69 56 aa6.16□□□□□ -1.42
HSPG2-214ENST00000635682 KRTAP2-3P0C7H8 128 aa6.15□□□□□ -1.42
HSPG2-214ENST00000635682 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
HSPG2-214ENST00000635682 MT1XP80297 61 aa6.15□□□□□ -1.42
HSPG2-214ENST00000635682 KRTAP2-4Q9BYR9 128 aa6.15□□□□□ -1.42
HSPG2-214ENST00000635682 A0A1B0GU33 70 aa6.14□□□□□ -1.43
HSPG2-214ENST00000635682 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
HSPG2-214ENST00000635682 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
HSPG2-214ENST00000635682 SPRR2EP22531 72 aa6.1□□□□□ -1.43
HSPG2-214ENST00000635682 SPRR2BP35325 72 aa6.1□□□□□ -1.43
HSPG2-214ENST00000635682 SPRR2AP35326 72 aa6.1□□□□□ -1.43
HSPG2-214ENST00000635682 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
HSPG2-214ENST00000635682 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
HSPG2-214ENST00000635682 A0A0D9SG42 100 aa6.08□□□□□ -1.44
HSPG2-214ENST00000635682 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
HSPG2-214ENST00000635682 SMIM26A0A096LP01 95 aa6.03□□□□□ -1.44
HSPG2-214ENST00000635682 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
HSPG2-214ENST00000635682 V9GYY9 64 aa6.03□□□□□ -1.44
HSPG2-214ENST00000635682 SPINT4Q6UDR6 99 aa6.02□□□□□ -1.45
HSPG2-214ENST00000635682 KRTAP12-2P59991 146 aa6□□□□□ -1.45
HSPG2-214ENST00000635682 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
HSPG2-214ENST00000635682 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
HSPG2-214ENST00000635682 Q1T7F1 81 aa5.97□□□□□ -1.45
HSPG2-214ENST00000635682 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
HSPG2-214ENST00000635682 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
HSPG2-214ENST00000635682 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
HSPG2-214ENST00000635682 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
HSPG2-214ENST00000635682 SPRR2DP22532 72 aa5.9□□□□□ -1.46
HSPG2-214ENST00000635682 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
HSPG2-214ENST00000635682 KRTAP12-1P59990 96 aa5.86□□□□□ -1.47
HSPG2-214ENST00000635682 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
HSPG2-214ENST00000635682 A8MU10 97 aa5.84□□□□□ -1.47
HSPG2-214ENST00000635682 UQCR11O14957 56 aa5.84□□□□□ -1.47
HSPG2-214ENST00000635682 PSPHP1O15172 72 aa5.78□□□□□ -1.48
HSPG2-214ENST00000635682 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
HSPG2-214ENST00000635682 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
HSPG2-214ENST00000635682 K7ERS5 55 aa5.69□□□□□ -1.5
HSPG2-214ENST00000635682 A6NED7 52 aa5.66□□□□□ -1.5
HSPG2-214ENST00000635682 TNP1P09430 55 aa5.65□□□□□ -1.5
HSPG2-214ENST00000635682 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
HSPG2-214ENST00000635682 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
HSPG2-214ENST00000635682 GPR98Q8WXG9 6306 aa5.54□□□□□ -1.52
HSPG2-214ENST00000635682 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
HSPG2-214ENST00000635682 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms