RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
LINC00339-210ENST00000635675 FAM236DA0A1B0GTK5 79 aa4.87□□□□□ -1.63
LINC00339-210ENST00000635675 FAM236CP0DP71 79 aa4.87□□□□□ -1.63
LINC00339-210ENST00000635675 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
LINC00339-210ENST00000635675 CYSTM1Q9H1C7 97 aa4.87□□□□□ -1.63
LINC00339-210ENST00000635675 LOC101927531A0A1B0GV80 90 aa4.82□□□□□ -1.64
LINC00339-210ENST00000635675 H3BPC8 53 aa4.81□□□□□ -1.64
LINC00339-210ENST00000635675 KLKP1Q107X0 134 aa4.81□□□□□ -1.64
LINC00339-210ENST00000635675 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
LINC00339-210ENST00000635675 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
LINC00339-210ENST00000635675 CYP4F30PQ9H0H9 118 aa4.8□□□□□ -1.64
LINC00339-210ENST00000635675 H3BS24 57 aa4.79□□□□□ -1.64
LINC00339-210ENST00000635675 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
LINC00339-210ENST00000635675 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
LINC00339-210ENST00000635675 H7BZZ5 65 aa4.76□□□□□ -1.65
LINC00339-210ENST00000635675 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
LINC00339-210ENST00000635675 NDUFC1O43677 76 aa4.74□□□□□ -1.65
LINC00339-210ENST00000635675 C4orf26Q17RF5 130 aa4.74□□□□□ -1.65
LINC00339-210ENST00000635675 TMEM258P61165 79 aa4.71□□□□□ -1.66
LINC00339-210ENST00000635675 MT2AP02795 61 aa4.7□□□□□ -1.66
LINC00339-210ENST00000635675 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
LINC00339-210ENST00000635675 MT1FP04733 61 aa4.66□□□□□ -1.66
LINC00339-210ENST00000635675 SPANXA2-OT1Q8N9U9 137 aa4.66□□□□□ -1.66
LINC00339-210ENST00000635675 ATP5EP56381 51 aaPredicted RBP4.64□□□□□ -1.67
LINC00339-210ENST00000635675 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
LINC00339-210ENST00000635675 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
LINC00339-210ENST00000635675 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
LINC00339-210ENST00000635675 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
LINC00339-210ENST00000635675 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
LINC00339-210ENST00000635675 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
LINC00339-210ENST00000635675 ACYP2P14621 99 aa4.6□□□□□ -1.67
LINC00339-210ENST00000635675 COA5Q86WW8 74 aa4.6□□□□□ -1.67
LINC00339-210ENST00000635675 S4R3F8 94 aa4.6□□□□□ -1.67
LINC00339-210ENST00000635675 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
LINC00339-210ENST00000635675 CHKB-CPT1BH3BT56 60 aa4.58□□□□□ -1.68
LINC00339-210ENST00000635675 LCA10Q71F78 164 aa4.58□□□□□ -1.68
LINC00339-210ENST00000635675 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
LINC00339-210ENST00000635675 A8MUN3 132 aa4.56□□□□□ -1.68
LINC00339-210ENST00000635675 CSAG1Q6PB30 78 aa4.56□□□□□ -1.68
LINC00339-210ENST00000635675 USH2AO75445 5202 aa4.53□□□□□ -1.68
LINC00339-210ENST00000635675 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.69
LINC00339-210ENST00000635675 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
LINC00339-210ENST00000635675 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
LINC00339-210ENST00000635675 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
LINC00339-210ENST00000635675 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
LINC00339-210ENST00000635675 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
LINC00339-210ENST00000635675 H0YAA0 97 aa4.41□□□□□ -1.7
LINC00339-210ENST00000635675 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
LINC00339-210ENST00000635675 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
LINC00339-210ENST00000635675 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
LINC00339-210ENST00000635675 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
LINC00339-210ENST00000635675 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
LINC00339-210ENST00000635675 CRIPTQ9P021 101 aa4.37□□□□□ -1.71
LINC00339-210ENST00000635675 PSPHP1O15172 72 aa4.36□□□□□ -1.71
LINC00339-210ENST00000635675 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
LINC00339-210ENST00000635675 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
LINC00339-210ENST00000635675 A0A1B0GU69 56 aa4.35□□□□□ -1.71
LINC00339-210ENST00000635675 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
LINC00339-210ENST00000635675 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
LINC00339-210ENST00000635675 Q1T7F1 81 aa4.34□□□□□ -1.71
LINC00339-210ENST00000635675 SEC61GP60059 68 aa4.33□□□□□ -1.72
LINC00339-210ENST00000635675 V9GYY9 64 aa4.33□□□□□ -1.72
LINC00339-210ENST00000635675 MT1BP07438 61 aa4.32□□□□□ -1.72
LINC00339-210ENST00000635675 Q5VV11 94 aa4.3□□□□□ -1.72
LINC00339-210ENST00000635675 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
LINC00339-210ENST00000635675 P0C880 135 aa4.29□□□□□ -1.72
LINC00339-210ENST00000635675 R4GN34 69 aa4.22□□□□□ -1.73
LINC00339-210ENST00000635675 A0A1B0GU33 70 aa4.21□□□□□ -1.73
LINC00339-210ENST00000635675 A6NED7 52 aa4.21□□□□□ -1.73
LINC00339-210ENST00000635675 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
LINC00339-210ENST00000635675 A6NN06 94 aa4.2□□□□□ -1.74
LINC00339-210ENST00000635675 M0QZ58 72 aa4.2□□□□□ -1.74
LINC00339-210ENST00000635675 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
LINC00339-210ENST00000635675 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
LINC00339-210ENST00000635675 A0A0D9SG42 100 aa4.16□□□□□ -1.74
LINC00339-210ENST00000635675 UQCR11O14957 56 aa4.16□□□□□ -1.74
LINC00339-210ENST00000635675 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.74
LINC00339-210ENST00000635675 LINC01554Q52M75 96 aa4.15□□□□□ -1.74
LINC00339-210ENST00000635675 A8MU10 97 aa4.14□□□□□ -1.75
LINC00339-210ENST00000635675 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
LINC00339-210ENST00000635675 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
LINC00339-210ENST00000635675 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
LINC00339-210ENST00000635675 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
LINC00339-210ENST00000635675 MT1XP80297 61 aa4.09□□□□□ -1.75
LINC00339-210ENST00000635675 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
LINC00339-210ENST00000635675 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
LINC00339-210ENST00000635675 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
LINC00339-210ENST00000635675 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
LINC00339-210ENST00000635675 SPINT4Q6UDR6 99 aa4.04□□□□□ -1.76
LINC00339-210ENST00000635675 KRTAP12-2P59991 146 aa4□□□□□ -1.77
LINC00339-210ENST00000635675 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
LINC00339-210ENST00000635675 K7ERS5 55 aa3.96□□□□□ -1.77
LINC00339-210ENST00000635675 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
LINC00339-210ENST00000635675 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
LINC00339-210ENST00000635675 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
LINC00339-210ENST00000635675 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.78
LINC00339-210ENST00000635675 KMT2DO14686 5537 aa3.89□□□□□ -1.79
LINC00339-210ENST00000635675 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
LINC00339-210ENST00000635675 NEBP20929 6669 aa3.87□□□□□ -1.79
LINC00339-210ENST00000635675 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms