RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 HRES1P13985 223 aa9.51□□□□□ -0.89
PNKP-224ENST00000631020 KRTAP10-6P60371 365 aaPredicted RBP9.51□□□□□ -0.89
PNKP-224ENST00000631020 M0R2T5 61 aa9.48□□□□□ -0.89
PNKP-224ENST00000631020 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
PNKP-224ENST00000631020 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
PNKP-224ENST00000631020 COA5Q86WW8 74 aa9.42□□□□□ -0.9
PNKP-224ENST00000631020 PRO0628Q9UI54 55 aa9.41□□□□□ -0.9
PNKP-224ENST00000631020 C7orf65Q6ZTY9 151 aa9.41□□□□□ -0.9
PNKP-224ENST00000631020 CRCT1Q9UGL9 99 aa9.39□□□□□ -0.91
PNKP-224ENST00000631020 FSIP2Q5CZC0 6907 aa9.39□□□□□ -0.91
PNKP-224ENST00000631020 RBM12B-AS1Q9P1G2 102 aa9.36□□□□□ -0.91
PNKP-224ENST00000631020 BRK1Q8WUW1 75 aa9.35□□□□□ -0.91
PNKP-224ENST00000631020 PSPHP1O15172 72 aa9.29□□□□□ -0.92
PNKP-224ENST00000631020 ACYP2P14621 99 aa9.29□□□□□ -0.92
PNKP-224ENST00000631020 A8MUN3 132 aa9.24□□□□□ -0.93
PNKP-224ENST00000631020 PRR15LQ9BU68 103 aa9.24□□□□□ -0.93
PNKP-224ENST00000631020 DMAC1Q96GE9 116 aa9.21□□□□□ -0.93
PNKP-224ENST00000631020 LINC01558Q9Y6Z2 57 aa9.21□□□□□ -0.93
PNKP-224ENST00000631020 Q5VV11 94 aa9.2□□□□□ -0.94
PNKP-224ENST00000631020 CHKB-CPT1BH3BT56 60 aa9.19□□□□□ -0.94
PNKP-224ENST00000631020 KRTAP3-1Q9BYR8 98 aa9.17□□□□□ -0.94
PNKP-224ENST00000631020 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
PNKP-224ENST00000631020 H1FX-AS1Q4G0G2 97 aa9.14□□□□□ -0.95
PNKP-224ENST00000631020 A6NED7 52 aa9.08□□□□□ -0.96
PNKP-224ENST00000631020 MT2AP02795 61 aa9.01□□□□□ -0.97
PNKP-224ENST00000631020 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
PNKP-224ENST00000631020 A0A1B0GU69 56 aa8.95□□□□□ -0.98
PNKP-224ENST00000631020 SPTSSBQ8NFR3 76 aa8.95□□□□□ -0.98
PNKP-224ENST00000631020 MT1FP04733 61 aa8.93□□□□□ -0.98
PNKP-224ENST00000631020 S4R3F8 94 aa8.93□□□□□ -0.98
PNKP-224ENST00000631020 LCA10Q71F78 164 aa8.92□□□□□ -0.98
PNKP-224ENST00000631020 USH2AO75445 5202 aa8.91□□□□□ -0.98
PNKP-224ENST00000631020 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
PNKP-224ENST00000631020 KRTAP9-3Q9BYQ3 159 aa8.88□□□□□ -0.99
PNKP-224ENST00000631020 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
PNKP-224ENST00000631020 PMAIP1Q13794 54 aa8.85□□□□□ -0.99
PNKP-224ENST00000631020 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
PNKP-224ENST00000631020 LCE2BO14633 110 aa8.83□□□□□ -1
PNKP-224ENST00000631020 SEC61GP60059 68 aa8.82□□□□□ -1
PNKP-224ENST00000631020 CSAG1Q6PB30 78 aa8.8□□□□□ -1
PNKP-224ENST00000631020 A8MU10 97 aa8.79□□□□□ -1
PNKP-224ENST00000631020 UQCR11O14957 56 aa8.78□□□□□ -1
PNKP-224ENST00000631020 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.75□□□□□ -1.01
PNKP-224ENST00000631020 SPATA8Q6RVD6 105 aa8.71□□□□□ -1.01
PNKP-224ENST00000631020 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
PNKP-224ENST00000631020 KRTAP19-1Q8IUB9 90 aa8.7□□□□□ -1.02
PNKP-224ENST00000631020 FCGBPQ9Y6R7 5405 aaPredicted RBP8.68□□□□□ -1.02
PNKP-224ENST00000631020 A6NN06 94 aa8.68□□□□□ -1.02
PNKP-224ENST00000631020 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
PNKP-224ENST00000631020 KRTAP9-7A8MTY7 169 aa8.65□□□□□ -1.02
PNKP-224ENST00000631020 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
PNKP-224ENST00000631020 H0YAA0 97 aa8.54□□□□□ -1.04
PNKP-224ENST00000631020 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
PNKP-224ENST00000631020 A0A1B0GU33 70 aa8.48□□□□□ -1.05
PNKP-224ENST00000631020 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
PNKP-224ENST00000631020 MACF1Q9UPN3 7388 aaKnown RBP8.41□□□□□ -1.06
PNKP-224ENST00000631020 P0C880 135 aa8.39□□□□□ -1.07
PNKP-224ENST00000631020 SPRR2GQ9BYE4 73 aa8.37□□□□□ -1.07
PNKP-224ENST00000631020 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
PNKP-224ENST00000631020 SYNE2Q8WXH0 6885 aaKnown RBP8.34□□□□□ -1.07
PNKP-224ENST00000631020 K7ERS5 55 aa8.34□□□□□ -1.08
PNKP-224ENST00000631020 KRTAP19-8Q3LI54 63 aa8.24□□□□□ -1.09
PNKP-224ENST00000631020 R4GN34 69 aa8.2□□□□□ -1.1
PNKP-224ENST00000631020 MT1BP07438 61 aa8.19□□□□□ -1.1
PNKP-224ENST00000631020 KRTAP6-3Q3LI67 103 aa8.19□□□□□ -1.1
PNKP-224ENST00000631020 M0QZ58 72 aa8.18□□□□□ -1.1
PNKP-224ENST00000631020 PRAC1Q96KF2 57 aa8.15□□□□□ -1.1
PNKP-224ENST00000631020 KRTAP10-5P60370 271 aa8.05□□□□□ -1.12
PNKP-224ENST00000631020 KRTAP13-4Q3LI77 160 aa8.05□□□□□ -1.12
PNKP-224ENST00000631020 LINC01554Q52M75 96 aa8.03□□□□□ -1.12
PNKP-224ENST00000631020 A0A0D9SG42 100 aa7.99□□□□□ -1.13
PNKP-224ENST00000631020 ROMO1P60602 79 aa7.97□□□□□ -1.13
PNKP-224ENST00000631020 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
PNKP-224ENST00000631020 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
PNKP-224ENST00000631020 NEBP20929 6669 aa7.84□□□□□ -1.15
PNKP-224ENST00000631020 KRTAP5-9P26371 169 aa7.81□□□□□ -1.16
PNKP-224ENST00000631020 SPINT4Q6UDR6 99 aa7.81□□□□□ -1.16
PNKP-224ENST00000631020 MUC12Q9UKN1 5478 aa7.8□□□□□ -1.16
PNKP-224ENST00000631020 MT1XP80297 61 aa7.8□□□□□ -1.16
PNKP-224ENST00000631020 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
PNKP-224ENST00000631020 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
PNKP-224ENST00000631020 PRO2289Q9P1D8 64 aa7.75□□□□□ -1.17
PNKP-224ENST00000631020 KMT2DO14686 5537 aa7.67□□□□□ -1.18
PNKP-224ENST00000631020 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
PNKP-224ENST00000631020 MDN1Q9NU22 5596 aa7.6□□□□□ -1.19
PNKP-224ENST00000631020 KRTAP20-1Q3LI63 56 aa7.57□□□□□ -1.2
PNKP-224ENST00000631020 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
PNKP-224ENST00000631020 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
PNKP-224ENST00000631020 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
PNKP-224ENST00000631020 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
PNKP-224ENST00000631020 SPRR2EP22531 72 aa7.4□□□□□ -1.22
PNKP-224ENST00000631020 SPRR2BP35325 72 aa7.4□□□□□ -1.22
PNKP-224ENST00000631020 SPRR2AP35326 72 aa7.4□□□□□ -1.22
PNKP-224ENST00000631020 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
PNKP-224ENST00000631020 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
PNKP-224ENST00000631020 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
PNKP-224ENST00000631020 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
PNKP-224ENST00000631020 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
PNKP-224ENST00000631020 LCE1AQ5T7P2 110 aa7.32□□□□□ -1.24
PNKP-224ENST00000631020 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms