RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
NR1I3-235ENST00000628566 C5orf47Q569G3 176 aa3.8□□□□□ -1.8
NR1I3-235ENST00000628566 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
NR1I3-235ENST00000628566 H3BPC8 53 aa3.78□□□□□ -1.8
NR1I3-235ENST00000628566 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
NR1I3-235ENST00000628566 LINC00208Q96KT6 92 aa3.78□□□□□ -1.8
NR1I3-235ENST00000628566 S4R3F8 94 aa3.78□□□□□ -1.8
NR1I3-235ENST00000628566 KRTAP9-8Q9BYQ0 159 aa3.77□□□□□ -1.81
NR1I3-235ENST00000628566 OCR1Q9BZK8 76 aa3.77□□□□□ -1.81
NR1I3-235ENST00000628566 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
NR1I3-235ENST00000628566 A8MUN3 132 aa3.75□□□□□ -1.81
NR1I3-235ENST00000628566 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
NR1I3-235ENST00000628566 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
NR1I3-235ENST00000628566 MT2AP02795 61 aa3.74□□□□□ -1.81
NR1I3-235ENST00000628566 MT-ATP8P03928 68 aa3.74□□□□□ -1.81
NR1I3-235ENST00000628566 FAM236AA0A1B0GUQ0 79 aa3.73□□□□□ -1.81
NR1I3-235ENST00000628566 FAM236BA0A1B0GV22 79 aa3.73□□□□□ -1.81
NR1I3-235ENST00000628566 KRTAP3-1Q9BYR8 98 aa3.72□□□□□ -1.81
NR1I3-235ENST00000628566 TRAV7A0A075B6U4 112 aa3.71□□□□□ -1.82
NR1I3-235ENST00000628566 LCA10Q71F78 164 aa3.71□□□□□ -1.82
NR1I3-235ENST00000628566 NDUFC1O43677 76 aa3.7□□□□□ -1.82
NR1I3-235ENST00000628566 MT1FP04733 61 aa3.7□□□□□ -1.82
NR1I3-235ENST00000628566 KLKP1Q107X0 134 aa3.69□□□□□ -1.82
NR1I3-235ENST00000628566 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
NR1I3-235ENST00000628566 SSPOA2VEC9 5147 aa3.69□□□□□ -1.82
NR1I3-235ENST00000628566 CRCT1Q9UGL9 99 aa3.68□□□□□ -1.82
NR1I3-235ENST00000628566 USH2AO75445 5202 aa3.68□□□□□ -1.82
NR1I3-235ENST00000628566 DMAC1Q96GE9 116 aa3.63□□□□□ -1.83
NR1I3-235ENST00000628566 ACYP2P14621 99 aa3.62□□□□□ -1.83
NR1I3-235ENST00000628566 SERP2Q8N6R1 65 aa3.62□□□□□ -1.83
NR1I3-235ENST00000628566 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
NR1I3-235ENST00000628566 H0YAA0 97 aa3.6□□□□□ -1.83
NR1I3-235ENST00000628566 CRIPTQ9P021 101 aa3.6□□□□□ -1.83
NR1I3-235ENST00000628566 C20orf197Q8N268 126 aa3.59□□□□□ -1.83
NR1I3-235ENST00000628566 SNURFQ9Y675 71 aa3.59□□□□□ -1.83
NR1I3-235ENST00000628566 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
NR1I3-235ENST00000628566 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
NR1I3-235ENST00000628566 SPANXA2-OT1Q8N9U9 137 aa3.57□□□□□ -1.84
NR1I3-235ENST00000628566 COX7CP15954 63 aa3.55□□□□□ -1.84
NR1I3-235ENST00000628566 ADM2Q7Z4H4 148 aa3.55□□□□□ -1.84
NR1I3-235ENST00000628566 Q5VV11 94 aa3.53□□□□□ -1.84
NR1I3-235ENST00000628566 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
NR1I3-235ENST00000628566 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
NR1I3-235ENST00000628566 ANAPC13Q9BS18 74 aa3.51□□□□□ -1.85
NR1I3-235ENST00000628566 R4GN34 69 aa3.5□□□□□ -1.85
NR1I3-235ENST00000628566 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
NR1I3-235ENST00000628566 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
NR1I3-235ENST00000628566 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
NR1I3-235ENST00000628566 M0QZ58 72 aa3.45□□□□□ -1.86
NR1I3-235ENST00000628566 P0C880 135 aa3.44□□□□□ -1.86
NR1I3-235ENST00000628566 COA5Q86WW8 74 aa3.44□□□□□ -1.86
NR1I3-235ENST00000628566 A6NN06 94 aa3.43□□□□□ -1.86
NR1I3-235ENST00000628566 H7BZZ5 65 aa3.43□□□□□ -1.86
NR1I3-235ENST00000628566 SEC61GP60059 68 aa3.43□□□□□ -1.86
NR1I3-235ENST00000628566 MT1BP07438 61 aa3.42□□□□□ -1.86
NR1I3-235ENST00000628566 PLAC4Q8WY50 150 aa3.42□□□□□ -1.86
NR1I3-235ENST00000628566 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
NR1I3-235ENST00000628566 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
NR1I3-235ENST00000628566 SERP1Q9Y6X1 66 aa3.4□□□□□ -1.87
NR1I3-235ENST00000628566 LINC01554Q52M75 96 aa3.39□□□□□ -1.87
NR1I3-235ENST00000628566 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
NR1I3-235ENST00000628566 CCDC179H3BU77 68 aa3.36□□□□□ -1.87
NR1I3-235ENST00000628566 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
NR1I3-235ENST00000628566 CYSTM1Q9H1C7 97 aa3.36□□□□□ -1.87
NR1I3-235ENST00000628566 PCP4P48539 62 aa3.33□□□□□ -1.88
NR1I3-235ENST00000628566 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
NR1I3-235ENST00000628566 NEBP20929 6669 aa3.33□□□□□ -1.88
NR1I3-235ENST00000628566 TMEM258P61165 79 aa3.32□□□□□ -1.88
NR1I3-235ENST00000628566 A0A1B0GU69 56 aa3.31□□□□□ -1.88
NR1I3-235ENST00000628566 A0A1B0GU33 70 aa3.29□□□□□ -1.88
NR1I3-235ENST00000628566 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
NR1I3-235ENST00000628566 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
NR1I3-235ENST00000628566 SMIM26A0A096LP01 95 aa3.24□□□□□ -1.89
NR1I3-235ENST00000628566 MT1XP80297 61 aa3.24□□□□□ -1.89
NR1I3-235ENST00000628566 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
NR1I3-235ENST00000628566 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
NR1I3-235ENST00000628566 A0A0D9SG42 100 aa3.22□□□□□ -1.89
NR1I3-235ENST00000628566 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
NR1I3-235ENST00000628566 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
NR1I3-235ENST00000628566 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
NR1I3-235ENST00000628566 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
NR1I3-235ENST00000628566 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
NR1I3-235ENST00000628566 V9GYY9 64 aa3.17□□□□□ -1.9
NR1I3-235ENST00000628566 UQCR11O14957 56 aa3.15□□□□□ -1.91
NR1I3-235ENST00000628566 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
NR1I3-235ENST00000628566 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
NR1I3-235ENST00000628566 KMT2DO14686 5537 aa3.13□□□□□ -1.91
NR1I3-235ENST00000628566 KRTAP12-1P59990 96 aa3.12□□□□□ -1.91
NR1I3-235ENST00000628566 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
NR1I3-235ENST00000628566 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
NR1I3-235ENST00000628566 SVIPQ8NHG7 77 aa3.11□□□□□ -1.91
NR1I3-235ENST00000628566 KRTAP23-1A1A580 65 aa3.1□□□□□ -1.91
NR1I3-235ENST00000628566 A8MU10 97 aa3.1□□□□□ -1.91
NR1I3-235ENST00000628566 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
NR1I3-235ENST00000628566 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
NR1I3-235ENST00000628566 K7ERS5 55 aa3.08□□□□□ -1.92
NR1I3-235ENST00000628566 Q1T7F1 81 aa3.08□□□□□ -1.92
NR1I3-235ENST00000628566 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
NR1I3-235ENST00000628566 PSPHP1O15172 72 aa3.06□□□□□ -1.92
NR1I3-235ENST00000628566 RPS28P62857 69 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms