RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 FAM236CP0DP71 79 aa12.43□□□□□ -0.42
CAPNS1-216ENST00000628306 IGKV2D-30A0A075B6S6 120 aa12.4□□□□□ -0.42
CAPNS1-216ENST00000628306 KRTAP9-8Q9BYQ0 159 aa12.38□□□□□ -0.43
CAPNS1-216ENST00000628306 SPINK7P58062 85 aa12.34□□□□□ -0.43
CAPNS1-216ENST00000628306 FCGBPQ9Y6R7 5405 aaPredicted RBP12.33□□□□□ -0.43
CAPNS1-216ENST00000628306 HRES1P13985 223 aa12.32□□□□□ -0.44
CAPNS1-216ENST00000628306 RPS28P62857 69 aaKnown RBP12.3□□□□□ -0.44
CAPNS1-216ENST00000628306 SERP1Q9Y6X1 66 aa12.24□□□□□ -0.45
CAPNS1-216ENST00000628306 DMAC1Q96GE9 116 aa12.18□□□□□ -0.46
CAPNS1-216ENST00000628306 A8MUN3 132 aa12.16□□□□□ -0.46
CAPNS1-216ENST00000628306 ACYP2P14621 99 aa12.14□□□□□ -0.47
CAPNS1-216ENST00000628306 MT2AP02795 61 aa12.1□□□□□ -0.47
CAPNS1-216ENST00000628306 LCE2BO14633 110 aa12.09□□□□□ -0.47
CAPNS1-216ENST00000628306 C4orf26Q17RF5 130 aa12.09□□□□□ -0.47
CAPNS1-216ENST00000628306 KRTAP19-1Q8IUB9 90 aa12.07□□□□□ -0.48
CAPNS1-216ENST00000628306 MT1FP04733 61 aa12.03□□□□□ -0.48
CAPNS1-216ENST00000628306 COA5Q86WW8 74 aa12.02□□□□□ -0.49
CAPNS1-216ENST00000628306 MPLKIPQ8TAP9 179 aa12.01□□□□□ -0.49
CAPNS1-216ENST00000628306 MACF1Q9UPN3 7388 aaKnown RBP12□□□□□ -0.49
CAPNS1-216ENST00000628306 KRTAP9-3Q9BYQ3 159 aa12□□□□□ -0.49
CAPNS1-216ENST00000628306 KRTAP3-1Q9BYR8 98 aa11.99□□□□□ -0.49
CAPNS1-216ENST00000628306 SYNE2Q8WXH0 6885 aaKnown RBP11.95□□□□□ -0.5
CAPNS1-216ENST00000628306 SMIM26A0A096LP01 95 aa11.92□□□□□ -0.5
CAPNS1-216ENST00000628306 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
CAPNS1-216ENST00000628306 CHKB-CPT1BH3BT56 60 aa11.85□□□□□ -0.51
CAPNS1-216ENST00000628306 KRTAP10-10P60014 251 aa11.82□□□□□ -0.52
CAPNS1-216ENST00000628306 H1FX-AS1Q4G0G2 97 aa11.79□□□□□ -0.52
CAPNS1-216ENST00000628306 SPTSSBQ8NFR3 76 aa11.75□□□□□ -0.53
CAPNS1-216ENST00000628306 KRTAP19-6Q3LI70 58 aa11.73□□□□□ -0.53
CAPNS1-216ENST00000628306 V9GYY9 64 aa11.73□□□□□ -0.53
CAPNS1-216ENST00000628306 Q1T7F1 81 aa11.72□□□□□ -0.53
CAPNS1-216ENST00000628306 LINC01558Q9Y6Z2 57 aa11.62□□□□□ -0.55
CAPNS1-216ENST00000628306 S4R3F8 94 aa11.62□□□□□ -0.55
CAPNS1-216ENST00000628306 KRTAP3-3Q9BYR6 98 aa11.58□□□□□ -0.56
CAPNS1-216ENST00000628306 LCA10Q71F78 164 aa11.57□□□□□ -0.56
CAPNS1-216ENST00000628306 KRTAP6-3Q3LI67 103 aa11.5□□□□□ -0.57
CAPNS1-216ENST00000628306 CSAG1Q6PB30 78 aa11.44□□□□□ -0.58
CAPNS1-216ENST00000628306 PRR15LQ9BU68 103 aa11.41□□□□□ -0.58
CAPNS1-216ENST00000628306 A0A1B0GU69 56 aa11.38□□□□□ -0.59
CAPNS1-216ENST00000628306 SEC61GP60059 68 aa11.38□□□□□ -0.59
CAPNS1-216ENST00000628306 PSPHP1O15172 72 aa11.34□□□□□ -0.59
CAPNS1-216ENST00000628306 NEBP20929 6669 aa11.33□□□□□ -0.6
CAPNS1-216ENST00000628306 Q5VV11 94 aa11.32□□□□□ -0.6
CAPNS1-216ENST00000628306 H0YAA0 97 aa11.28□□□□□ -0.6
CAPNS1-216ENST00000628306 MUC12Q9UKN1 5478 aa11.22□□□□□ -0.61
CAPNS1-216ENST00000628306 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
CAPNS1-216ENST00000628306 A0A1B0GU33 70 aa11.08□□□□□ -0.64
CAPNS1-216ENST00000628306 UQCR11O14957 56 aa11.08□□□□□ -0.64
CAPNS1-216ENST00000628306 ADM2Q7Z4H4 148 aa11.08□□□□□ -0.64
CAPNS1-216ENST00000628306 A6NED7 52 aa11.04□□□□□ -0.64
CAPNS1-216ENST00000628306 P0C880 135 aa11□□□□□ -0.65
CAPNS1-216ENST00000628306 SPATA8Q6RVD6 105 aa10.97□□□□□ -0.65
CAPNS1-216ENST00000628306 CDC42SE1Q9NRR8 79 aa10.93□□□□□ -0.66
CAPNS1-216ENST00000628306 MIR22HGQ0VDD5 57 aa10.91□□□□□ -0.66
CAPNS1-216ENST00000628306 MT1BP07438 61 aa10.9□□□□□ -0.67
CAPNS1-216ENST00000628306 M0QZ58 72 aa10.89□□□□□ -0.67
CAPNS1-216ENST00000628306 KRTAP20-1Q3LI63 56 aa10.89□□□□□ -0.67
CAPNS1-216ENST00000628306 BRK1Q8WUW1 75 aa10.86□□□□□ -0.67
CAPNS1-216ENST00000628306 A6NN06 94 aa10.85□□□□□ -0.67
CAPNS1-216ENST00000628306 MDN1Q9NU22 5596 aa10.85□□□□□ -0.67
CAPNS1-216ENST00000628306 CRIPTQ9P021 101 aa10.82□□□□□ -0.68
CAPNS1-216ENST00000628306 KMT2DO14686 5537 aa10.82□□□□□ -0.68
CAPNS1-216ENST00000628306 KRTAP5-9P26371 169 aa10.77□□□□□ -0.68
CAPNS1-216ENST00000628306 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
CAPNS1-216ENST00000628306 KRTAP13-4Q3LI77 160 aa10.75□□□□□ -0.69
CAPNS1-216ENST00000628306 PRO0628Q9UI54 55 aa10.74□□□□□ -0.69
CAPNS1-216ENST00000628306 KRTAP10-5P60370 271 aa10.72□□□□□ -0.69
CAPNS1-216ENST00000628306 R4GN34 69 aa10.72□□□□□ -0.69
CAPNS1-216ENST00000628306 SPRR2GQ9BYE4 73 aa10.69□□□□□ -0.7
CAPNS1-216ENST00000628306 A8MU10 97 aa10.67□□□□□ -0.7
CAPNS1-216ENST00000628306 A0A0D9SG42 100 aa10.5□□□□□ -0.73
CAPNS1-216ENST00000628306 K7ERS5 55 aa10.49□□□□□ -0.73
CAPNS1-216ENST00000628306 KRTAP2-3P0C7H8 128 aa10.45□□□□□ -0.74
CAPNS1-216ENST00000628306 KRTAP2-4Q9BYR9 128 aa10.45□□□□□ -0.74
CAPNS1-216ENST00000628306 KRTAP12-1P59990 96 aa10.41□□□□□ -0.74
CAPNS1-216ENST00000628306 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
CAPNS1-216ENST00000628306 PMAIP1Q13794 54 aa10.34□□□□□ -0.75
CAPNS1-216ENST00000628306 KRTAP12-2P59991 146 aa10.33□□□□□ -0.76
CAPNS1-216ENST00000628306 SPINT4Q6UDR6 99 aa10.3□□□□□ -0.76
CAPNS1-216ENST00000628306 SPRR2FQ96RM1 72 aa10.23□□□□□ -0.77
CAPNS1-216ENST00000628306 SPRR2EP22531 72 aa10.22□□□□□ -0.77
CAPNS1-216ENST00000628306 SPRR2BP35325 72 aa10.22□□□□□ -0.77
CAPNS1-216ENST00000628306 SPRR2AP35326 72 aa10.22□□□□□ -0.77
CAPNS1-216ENST00000628306 PLAC4Q8WY50 150 aa10.13□□□□□ -0.79
CAPNS1-216ENST00000628306 LCE1AQ5T7P2 110 aa10.09□□□□□ -0.79
CAPNS1-216ENST00000628306 KRTAP2-2Q9BYT5 123 aa10.09□□□□□ -0.79
CAPNS1-216ENST00000628306 KRTAP2-1Q9BYU5 128 aa10.09□□□□□ -0.79
CAPNS1-216ENST00000628306 MT1XP80297 61 aa10.06□□□□□ -0.8
CAPNS1-216ENST00000628306 CAMK2N1Q7Z7J9 78 aa10.02□□□□□ -0.8
CAPNS1-216ENST00000628306 ROMO1P60602 79 aa10.01□□□□□ -0.81
CAPNS1-216ENST00000628306 KRTAP8-1Q8IUC2 63 aa9.98□□□□□ -0.81
CAPNS1-216ENST00000628306 KTN1-AS1Q86SY8 53 aa9.91□□□□□ -0.82
CAPNS1-216ENST00000628306 PRO2289Q9P1D8 64 aa9.91□□□□□ -0.82
CAPNS1-216ENST00000628306 SPRR2DP22532 72 aa9.88□□□□□ -0.83
CAPNS1-216ENST00000628306 C10orf95Q9H7T3 257 aa9.85□□□□□ -0.83
CAPNS1-216ENST00000628306 KRTAP4-8A0A0G2JLE6 195 aa9.83□□□□□ -0.84
CAPNS1-216ENST00000628306 KRTAP4-8Q9BYQ9 185 aa9.83□□□□□ -0.84
CAPNS1-216ENST00000628306 SVIPQ8NHG7 77 aa9.75□□□□□ -0.85
CAPNS1-216ENST00000628306 KRTAP25-1Q3LHN0 102 aa9.69□□□□□ -0.86
CAPNS1-216ENST00000628306 LCE3BQ5TA77 95 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms