RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 H1FX-AS1Q4G0G2 97 aa7.34□□□□□ -1.23
UBXN1-218ENST00000616865 COX7CP15954 63 aa7.33□□□□□ -1.24
UBXN1-218ENST00000616865 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
UBXN1-218ENST00000616865 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
UBXN1-218ENST00000616865 LCE2BO14633 110 aa7.31□□□□□ -1.24
UBXN1-218ENST00000616865 MT1FP04733 61 aa7.31□□□□□ -1.24
UBXN1-218ENST00000616865 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
UBXN1-218ENST00000616865 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
UBXN1-218ENST00000616865 A8MUN3 132 aa7.24□□□□□ -1.25
UBXN1-218ENST00000616865 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
UBXN1-218ENST00000616865 S4R3F8 94 aa7.22□□□□□ -1.25
UBXN1-218ENST00000616865 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.25
UBXN1-218ENST00000616865 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
UBXN1-218ENST00000616865 NDUFC1O43677 76 aa7.18□□□□□ -1.26
UBXN1-218ENST00000616865 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
UBXN1-218ENST00000616865 SPANXA2-OT1Q8N9U9 137 aa7.15□□□□□ -1.26
UBXN1-218ENST00000616865 CCDC179H3BU77 68 aa7.14□□□□□ -1.27
UBXN1-218ENST00000616865 ACYP2P14621 99 aa7.13□□□□□ -1.27
UBXN1-218ENST00000616865 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
UBXN1-218ENST00000616865 LCA10Q71F78 164 aa7.13□□□□□ -1.27
UBXN1-218ENST00000616865 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
UBXN1-218ENST00000616865 H7BZZ5 65 aa7.08□□□□□ -1.28
UBXN1-218ENST00000616865 CYSTM1Q9H1C7 97 aa7.08□□□□□ -1.28
UBXN1-218ENST00000616865 CHKB-CPT1BH3BT56 60 aa7.05□□□□□ -1.28
UBXN1-218ENST00000616865 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
UBXN1-218ENST00000616865 SPTSSBQ8NFR3 76 aa7□□□□□ -1.29
UBXN1-218ENST00000616865 KRTAP6-3Q3LI67 103 aa6.97□□□□□ -1.29
UBXN1-218ENST00000616865 ATP5EP56381 51 aaPredicted RBP6.96□□□□□ -1.3
UBXN1-218ENST00000616865 COA5Q86WW8 74 aa6.94□□□□□ -1.3
UBXN1-218ENST00000616865 TMEM258P61165 79 aa6.92□□□□□ -1.3
UBXN1-218ENST00000616865 PCP4P48539 62 aa6.91□□□□□ -1.3
UBXN1-218ENST00000616865 H0YAA0 97 aa6.84□□□□□ -1.31
UBXN1-218ENST00000616865 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
UBXN1-218ENST00000616865 NEBP20929 6669 aa6.79□□□□□ -1.32
UBXN1-218ENST00000616865 KRTAP20-1Q3LI63 56 aa6.78□□□□□ -1.32
UBXN1-218ENST00000616865 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
UBXN1-218ENST00000616865 SEC61GP60059 68 aa6.73□□□□□ -1.33
UBXN1-218ENST00000616865 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
UBXN1-218ENST00000616865 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.34
UBXN1-218ENST00000616865 P0C880 135 aa6.7□□□□□ -1.34
UBXN1-218ENST00000616865 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
UBXN1-218ENST00000616865 A6NN06 94 aa6.66□□□□□ -1.34
UBXN1-218ENST00000616865 R4GN34 69 aa6.65□□□□□ -1.34
UBXN1-218ENST00000616865 MT1BP07438 61 aa6.62□□□□□ -1.35
UBXN1-218ENST00000616865 A0A1B0GU69 56 aa6.61□□□□□ -1.35
UBXN1-218ENST00000616865 M0QZ58 72 aa6.61□□□□□ -1.35
UBXN1-218ENST00000616865 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
UBXN1-218ENST00000616865 Q5VV11 94 aa6.58□□□□□ -1.36
UBXN1-218ENST00000616865 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
UBXN1-218ENST00000616865 KRTAP19-8Q3LI54 63 aa6.56□□□□□ -1.36
UBXN1-218ENST00000616865 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
UBXN1-218ENST00000616865 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
UBXN1-218ENST00000616865 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
UBXN1-218ENST00000616865 LINC01554Q52M75 96 aa6.52□□□□□ -1.37
UBXN1-218ENST00000616865 A0A1B0GU33 70 aa6.51□□□□□ -1.37
UBXN1-218ENST00000616865 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
UBXN1-218ENST00000616865 KMT2DO14686 5537 aa6.5□□□□□ -1.37
UBXN1-218ENST00000616865 SMIM26A0A096LP01 95 aa6.49□□□□□ -1.37
UBXN1-218ENST00000616865 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
UBXN1-218ENST00000616865 V9GYY9 64 aa6.49□□□□□ -1.37
UBXN1-218ENST00000616865 Q1T7F1 81 aa6.42□□□□□ -1.38
UBXN1-218ENST00000616865 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
UBXN1-218ENST00000616865 KRTAP2-3P0C7H8 128 aa6.41□□□□□ -1.38
UBXN1-218ENST00000616865 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
UBXN1-218ENST00000616865 KRTAP2-4Q9BYR9 128 aa6.41□□□□□ -1.38
UBXN1-218ENST00000616865 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
UBXN1-218ENST00000616865 A0A0D9SG42 100 aa6.36□□□□□ -1.39
UBXN1-218ENST00000616865 PSPHP1O15172 72 aa6.36□□□□□ -1.39
UBXN1-218ENST00000616865 UQCR11O14957 56 aa6.33□□□□□ -1.4
UBXN1-218ENST00000616865 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
UBXN1-218ENST00000616865 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
UBXN1-218ENST00000616865 A8MU10 97 aa6.24□□□□□ -1.41
UBXN1-218ENST00000616865 SPRR2EP22531 72 aa6.24□□□□□ -1.41
UBXN1-218ENST00000616865 SPRR2BP35325 72 aa6.24□□□□□ -1.41
UBXN1-218ENST00000616865 SPRR2AP35326 72 aa6.24□□□□□ -1.41
UBXN1-218ENST00000616865 MIR22HGQ0VDD5 57 aa6.23□□□□□ -1.41
UBXN1-218ENST00000616865 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
UBXN1-218ENST00000616865 A6NED7 52 aa6.21□□□□□ -1.42
UBXN1-218ENST00000616865 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.42
UBXN1-218ENST00000616865 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
UBXN1-218ENST00000616865 KRTAP2-2Q9BYT5 123 aa6.16□□□□□ -1.42
UBXN1-218ENST00000616865 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
UBXN1-218ENST00000616865 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
UBXN1-218ENST00000616865 MT1XP80297 61 aa6.13□□□□□ -1.43
UBXN1-218ENST00000616865 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
UBXN1-218ENST00000616865 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
UBXN1-218ENST00000616865 K7ERS5 55 aa6.09□□□□□ -1.43
UBXN1-218ENST00000616865 SPRR2DP22532 72 aa6.04□□□□□ -1.44
UBXN1-218ENST00000616865 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
UBXN1-218ENST00000616865 KRTAP4-8A0A0G2JLE6 195 aa5.97□□□□□ -1.45
UBXN1-218ENST00000616865 KRTAP4-8Q9BYQ9 185 aa5.97□□□□□ -1.45
UBXN1-218ENST00000616865 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
UBXN1-218ENST00000616865 GPR98Q8WXG9 6306 aa5.88□□□□□ -1.47
UBXN1-218ENST00000616865 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
UBXN1-218ENST00000616865 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
UBXN1-218ENST00000616865 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
UBXN1-218ENST00000616865 TNP1P09430 55 aa5.82□□□□□ -1.48
UBXN1-218ENST00000616865 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
UBXN1-218ENST00000616865 ROMO1P60602 79 aa5.7□□□□□ -1.5
UBXN1-218ENST00000616865 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms