RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
MMP28-206ENST00000616383 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
MMP28-206ENST00000616383 H3BPC8 53 aa5.7□□□□□ -1.5
MMP28-206ENST00000616383 SPINK7P58062 85 aa5.7□□□□□ -1.5
MMP28-206ENST00000616383 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
MMP28-206ENST00000616383 C20orf197Q8N268 126 aa5.69□□□□□ -1.5
MMP28-206ENST00000616383 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
MMP28-206ENST00000616383 SNURFQ9Y675 71 aa5.68□□□□□ -1.5
MMP28-206ENST00000616383 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
MMP28-206ENST00000616383 HRES1P13985 223 aa5.64□□□□□ -1.51
MMP28-206ENST00000616383 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
MMP28-206ENST00000616383 FAT4Q6V0I7 4981 aa5.61□□□□□ -1.51
MMP28-206ENST00000616383 CYSTM1Q9H1C7 97 aa5.59□□□□□ -1.51
MMP28-206ENST00000616383 PCP4P48539 62 aa5.58□□□□□ -1.52
MMP28-206ENST00000616383 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
MMP28-206ENST00000616383 MPLKIPQ8TAP9 179 aa5.58□□□□□ -1.52
MMP28-206ENST00000616383 CRCT1Q9UGL9 99 aa5.57□□□□□ -1.52
MMP28-206ENST00000616383 MUC2Q02817 5179 aa5.55□□□□□ -1.52
MMP28-206ENST00000616383 NDUFC1O43677 76 aa5.55□□□□□ -1.52
MMP28-206ENST00000616383 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
MMP28-206ENST00000616383 H7BZZ5 65 aa5.54□□□□□ -1.52
MMP28-206ENST00000616383 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
MMP28-206ENST00000616383 FAM236DA0A1B0GTK5 79 aa5.53□□□□□ -1.52
MMP28-206ENST00000616383 FAM236CP0DP71 79 aa5.53□□□□□ -1.52
MMP28-206ENST00000616383 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
MMP28-206ENST00000616383 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
MMP28-206ENST00000616383 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
MMP28-206ENST00000616383 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
MMP28-206ENST00000616383 A8MUN3 132 aa5.46□□□□□ -1.54
MMP28-206ENST00000616383 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
MMP28-206ENST00000616383 TMEM258P61165 79 aa5.43□□□□□ -1.54
MMP28-206ENST00000616383 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
MMP28-206ENST00000616383 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
MMP28-206ENST00000616383 ACYP2P14621 99 aa5.4□□□□□ -1.54
MMP28-206ENST00000616383 S4R3F8 94 aa5.38□□□□□ -1.55
MMP28-206ENST00000616383 MT1HP80294 61 aa5.36□□□□□ -1.55
MMP28-206ENST00000616383 LCA10Q71F78 164 aa5.35□□□□□ -1.55
MMP28-206ENST00000616383 COA5Q86WW8 74 aa5.35□□□□□ -1.55
MMP28-206ENST00000616383 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
MMP28-206ENST00000616383 M0R2T5 61 aa5.29□□□□□ -1.56
MMP28-206ENST00000616383 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
MMP28-206ENST00000616383 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
MMP28-206ENST00000616383 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
MMP28-206ENST00000616383 SPTSSBQ8NFR3 76 aa5.25□□□□□ -1.57
MMP28-206ENST00000616383 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
MMP28-206ENST00000616383 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
MMP28-206ENST00000616383 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
MMP28-206ENST00000616383 KRTAP5-11Q6L8G4 156 aa5.15□□□□□ -1.59
MMP28-206ENST00000616383 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
MMP28-206ENST00000616383 H0YAA0 97 aa5.12□□□□□ -1.59
MMP28-206ENST00000616383 MT2AP02795 61 aa5.12□□□□□ -1.59
MMP28-206ENST00000616383 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
MMP28-206ENST00000616383 SMIM26A0A096LP01 95 aa5.09□□□□□ -1.59
MMP28-206ENST00000616383 MT1FP04733 61 aa5.08□□□□□ -1.6
MMP28-206ENST00000616383 P0C880 135 aa5.07□□□□□ -1.6
MMP28-206ENST00000616383 KRTAP10-10P60014 251 aa5.06□□□□□ -1.6
MMP28-206ENST00000616383 SEC61GP60059 68 aa5.06□□□□□ -1.6
MMP28-206ENST00000616383 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
MMP28-206ENST00000616383 A0A1B0GU69 56 aa5.05□□□□□ -1.6
MMP28-206ENST00000616383 Q1T7F1 81 aa5.03□□□□□ -1.6
MMP28-206ENST00000616383 V9GYY9 64 aa5.03□□□□□ -1.6
MMP28-206ENST00000616383 PRR15LQ9BU68 103 aa5.02□□□□□ -1.61
MMP28-206ENST00000616383 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
MMP28-206ENST00000616383 PSPHP1O15172 72 aa4.96□□□□□ -1.62
MMP28-206ENST00000616383 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
MMP28-206ENST00000616383 A0A1B0GU33 70 aa4.94□□□□□ -1.62
MMP28-206ENST00000616383 M0QZ58 72 aa4.94□□□□□ -1.62
MMP28-206ENST00000616383 R4GN34 69 aa4.94□□□□□ -1.62
MMP28-206ENST00000616383 Q5VV11 94 aa4.92□□□□□ -1.62
MMP28-206ENST00000616383 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
MMP28-206ENST00000616383 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
MMP28-206ENST00000616383 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
MMP28-206ENST00000616383 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
MMP28-206ENST00000616383 UQCR11O14957 56 aa4.85□□□□□ -1.63
MMP28-206ENST00000616383 LINC01554Q52M75 96 aa4.85□□□□□ -1.63
MMP28-206ENST00000616383 A6NED7 52 aa4.82□□□□□ -1.64
MMP28-206ENST00000616383 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
MMP28-206ENST00000616383 A0A0D9SG42 100 aa4.81□□□□□ -1.64
MMP28-206ENST00000616383 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
MMP28-206ENST00000616383 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
MMP28-206ENST00000616383 A8MU10 97 aa4.79□□□□□ -1.64
MMP28-206ENST00000616383 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
MMP28-206ENST00000616383 USH2AO75445 5202 aa4.79□□□□□ -1.64
MMP28-206ENST00000616383 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
MMP28-206ENST00000616383 MT1BP07438 61 aa4.77□□□□□ -1.65
MMP28-206ENST00000616383 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
MMP28-206ENST00000616383 A6NN06 94 aa4.74□□□□□ -1.65
MMP28-206ENST00000616383 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
MMP28-206ENST00000616383 PLAC4Q8WY50 150 aa4.71□□□□□ -1.66
MMP28-206ENST00000616383 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
MMP28-206ENST00000616383 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
MMP28-206ENST00000616383 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
MMP28-206ENST00000616383 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
MMP28-206ENST00000616383 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
MMP28-206ENST00000616383 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
MMP28-206ENST00000616383 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
MMP28-206ENST00000616383 K7ERS5 55 aa4.61□□□□□ -1.67
MMP28-206ENST00000616383 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
MMP28-206ENST00000616383 MT1XP80297 61 aa4.58□□□□□ -1.68
MMP28-206ENST00000616383 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms