RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
AL353770.3-201ENST00000616253 A6NED7 52 aa5.28□□□□□ -1.56
AL353770.3-201ENST00000616253 SPTSSBQ8NFR3 76 aa5.28□□□□□ -1.56
AL353770.3-201ENST00000616253 LPAP08519 4548 aa5.27□□□□□ -1.57
AL353770.3-201ENST00000616253 A6NN06 94 aa5.26□□□□□ -1.57
AL353770.3-201ENST00000616253 LRP2P98164 4655 aa5.25□□□□□ -1.57
AL353770.3-201ENST00000616253 LCA10Q71F78 164 aa5.23□□□□□ -1.57
AL353770.3-201ENST00000616253 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
AL353770.3-201ENST00000616253 A8MU10 97 aa5.2□□□□□ -1.58
AL353770.3-201ENST00000616253 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
AL353770.3-201ENST00000616253 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
AL353770.3-201ENST00000616253 COX6B2Q6YFQ2 88 aa5.18□□□□□ -1.58
AL353770.3-201ENST00000616253 SEC61BP60468 96 aaKnown RBP5.11□□□□□ -1.59
AL353770.3-201ENST00000616253 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
AL353770.3-201ENST00000616253 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
AL353770.3-201ENST00000616253 A0A1B0GU69 56 aa5.04□□□□□ -1.6
AL353770.3-201ENST00000616253 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
AL353770.3-201ENST00000616253 S4R3F8 94 aa5.03□□□□□ -1.6
AL353770.3-201ENST00000616253 H1FX-AS1Q4G0G2 97 aa5.02□□□□□ -1.61
AL353770.3-201ENST00000616253 H3BS24 57 aa5.01□□□□□ -1.61
AL353770.3-201ENST00000616253 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
AL353770.3-201ENST00000616253 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
AL353770.3-201ENST00000616253 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.62
AL353770.3-201ENST00000616253 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
AL353770.3-201ENST00000616253 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
AL353770.3-201ENST00000616253 UQCR11O14957 56 aa4.93□□□□□ -1.62
AL353770.3-201ENST00000616253 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
AL353770.3-201ENST00000616253 MUC2Q02817 5179 aa4.91□□□□□ -1.62
AL353770.3-201ENST00000616253 MIR22HGQ0VDD5 57 aa4.91□□□□□ -1.62
AL353770.3-201ENST00000616253 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
AL353770.3-201ENST00000616253 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
AL353770.3-201ENST00000616253 CSAG1Q6PB30 78 aa4.88□□□□□ -1.63
AL353770.3-201ENST00000616253 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
AL353770.3-201ENST00000616253 A0A1B0GU33 70 aa4.85□□□□□ -1.63
AL353770.3-201ENST00000616253 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
AL353770.3-201ENST00000616253 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
AL353770.3-201ENST00000616253 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
AL353770.3-201ENST00000616253 H0YAA0 97 aa4.81□□□□□ -1.64
AL353770.3-201ENST00000616253 P0C880 135 aa4.81□□□□□ -1.64
AL353770.3-201ENST00000616253 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
AL353770.3-201ENST00000616253 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
AL353770.3-201ENST00000616253 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
AL353770.3-201ENST00000616253 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
AL353770.3-201ENST00000616253 ROMO1P60602 79 aa4.71□□□□□ -1.66
AL353770.3-201ENST00000616253 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
AL353770.3-201ENST00000616253 A0A0D9SG42 100 aa4.67□□□□□ -1.66
AL353770.3-201ENST00000616253 M0QZ58 72 aa4.66□□□□□ -1.66
AL353770.3-201ENST00000616253 MT1HP80294 61 aa4.65□□□□□ -1.67
AL353770.3-201ENST00000616253 K7ERS5 55 aa4.64□□□□□ -1.67
AL353770.3-201ENST00000616253 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
AL353770.3-201ENST00000616253 R4GN34 69 aa4.64□□□□□ -1.67
AL353770.3-201ENST00000616253 M0R2T5 61 aa4.62□□□□□ -1.67
AL353770.3-201ENST00000616253 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
AL353770.3-201ENST00000616253 KRTAP12-2P59991 146 aa4.56□□□□□ -1.68
AL353770.3-201ENST00000616253 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
AL353770.3-201ENST00000616253 CRIPTQ9P021 101 aa4.53□□□□□ -1.68
AL353770.3-201ENST00000616253 MT2AP02795 61 aa4.49□□□□□ -1.69
AL353770.3-201ENST00000616253 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
AL353770.3-201ENST00000616253 MT1FP04733 61 aa4.47□□□□□ -1.69
AL353770.3-201ENST00000616253 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
AL353770.3-201ENST00000616253 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
AL353770.3-201ENST00000616253 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
AL353770.3-201ENST00000616253 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
AL353770.3-201ENST00000616253 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
AL353770.3-201ENST00000616253 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
AL353770.3-201ENST00000616253 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
AL353770.3-201ENST00000616253 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
AL353770.3-201ENST00000616253 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
AL353770.3-201ENST00000616253 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
AL353770.3-201ENST00000616253 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
AL353770.3-201ENST00000616253 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
AL353770.3-201ENST00000616253 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
AL353770.3-201ENST00000616253 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
AL353770.3-201ENST00000616253 MT1BP07438 61 aa4.24□□□□□ -1.73
AL353770.3-201ENST00000616253 USH2AO75445 5202 aa4.21□□□□□ -1.74
AL353770.3-201ENST00000616253 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
AL353770.3-201ENST00000616253 LCE2BO14633 110 aa4.19□□□□□ -1.74
AL353770.3-201ENST00000616253 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
AL353770.3-201ENST00000616253 LUZP6Q538Z0 58 aa4.15□□□□□ -1.74
AL353770.3-201ENST00000616253 TNP1P09430 55 aa4.14□□□□□ -1.75
AL353770.3-201ENST00000616253 MT1XP80297 61 aa4.13□□□□□ -1.75
AL353770.3-201ENST00000616253 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
AL353770.3-201ENST00000616253 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
AL353770.3-201ENST00000616253 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
AL353770.3-201ENST00000616253 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
AL353770.3-201ENST00000616253 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
AL353770.3-201ENST00000616253 KRTAP23-1A1A580 65 aa4.02□□□□□ -1.77
AL353770.3-201ENST00000616253 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
AL353770.3-201ENST00000616253 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
AL353770.3-201ENST00000616253 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
AL353770.3-201ENST00000616253 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
AL353770.3-201ENST00000616253 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
AL353770.3-201ENST00000616253 NEBP20929 6669 aa3.94□□□□□ -1.78
AL353770.3-201ENST00000616253 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
AL353770.3-201ENST00000616253 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
AL353770.3-201ENST00000616253 KMT2DO14686 5537 aa3.84□□□□□ -1.79
AL353770.3-201ENST00000616253 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
AL353770.3-201ENST00000616253 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
AL353770.3-201ENST00000616253 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
AL353770.3-201ENST00000616253 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms