RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
LINC00649-217ENST00000616030 IGKV2D-30A0A075B6S6 120 aa5.37□□□□□ -1.55
LINC00649-217ENST00000616030 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
LINC00649-217ENST00000616030 SPINK7P58062 85 aa5.35□□□□□ -1.55
LINC00649-217ENST00000616030 H7BZZ5 65 aa5.34□□□□□ -1.55
LINC00649-217ENST00000616030 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
LINC00649-217ENST00000616030 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
LINC00649-217ENST00000616030 TMEM258P61165 79 aa5.31□□□□□ -1.56
LINC00649-217ENST00000616030 SPANXA2-OT1Q8N9U9 137 aa5.31□□□□□ -1.56
LINC00649-217ENST00000616030 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
LINC00649-217ENST00000616030 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
LINC00649-217ENST00000616030 HRES1P13985 223 aa5.29□□□□□ -1.56
LINC00649-217ENST00000616030 ATP5EP56381 51 aaPredicted RBP5.28□□□□□ -1.56
LINC00649-217ENST00000616030 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
LINC00649-217ENST00000616030 M0R2T5 61 aa5.27□□□□□ -1.57
LINC00649-217ENST00000616030 FAM236DA0A1B0GTK5 79 aa5.26□□□□□ -1.57
LINC00649-217ENST00000616030 FAM236CP0DP71 79 aa5.26□□□□□ -1.57
LINC00649-217ENST00000616030 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
LINC00649-217ENST00000616030 C4orf26Q17RF5 130 aa5.23□□□□□ -1.57
LINC00649-217ENST00000616030 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
LINC00649-217ENST00000616030 A8MUN3 132 aa5.22□□□□□ -1.57
LINC00649-217ENST00000616030 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
LINC00649-217ENST00000616030 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
LINC00649-217ENST00000616030 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
LINC00649-217ENST00000616030 RBM12B-AS1Q9P1G2 102 aa5.21□□□□□ -1.58
LINC00649-217ENST00000616030 ACYP2P14621 99 aa5.2□□□□□ -1.58
LINC00649-217ENST00000616030 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.59
LINC00649-217ENST00000616030 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
LINC00649-217ENST00000616030 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
LINC00649-217ENST00000616030 COA5Q86WW8 74 aa5.12□□□□□ -1.59
LINC00649-217ENST00000616030 MT2AP02795 61 aa5.11□□□□□ -1.59
LINC00649-217ENST00000616030 RPS28P62857 69 aaKnown RBP5.11□□□□□ -1.59
LINC00649-217ENST00000616030 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
LINC00649-217ENST00000616030 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
LINC00649-217ENST00000616030 MT1FP04733 61 aa5.07□□□□□ -1.6
LINC00649-217ENST00000616030 USH2AO75445 5202 aa5.07□□□□□ -1.6
LINC00649-217ENST00000616030 SPTSSBQ8NFR3 76 aa5.06□□□□□ -1.6
LINC00649-217ENST00000616030 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
LINC00649-217ENST00000616030 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
LINC00649-217ENST00000616030 S4R3F8 94 aa5.05□□□□□ -1.6
LINC00649-217ENST00000616030 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
LINC00649-217ENST00000616030 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
LINC00649-217ENST00000616030 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
LINC00649-217ENST00000616030 LCA10Q71F78 164 aa5□□□□□ -1.61
LINC00649-217ENST00000616030 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
LINC00649-217ENST00000616030 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
LINC00649-217ENST00000616030 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
LINC00649-217ENST00000616030 V9GYY9 64 aa4.95□□□□□ -1.62
LINC00649-217ENST00000616030 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
LINC00649-217ENST00000616030 Q1T7F1 81 aa4.92□□□□□ -1.62
LINC00649-217ENST00000616030 LINC01558Q9Y6Z2 57 aa4.92□□□□□ -1.62
LINC00649-217ENST00000616030 SEC61GP60059 68 aa4.89□□□□□ -1.63
LINC00649-217ENST00000616030 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
LINC00649-217ENST00000616030 A0A1B0GU69 56 aa4.86□□□□□ -1.63
LINC00649-217ENST00000616030 H0YAA0 97 aa4.86□□□□□ -1.63
LINC00649-217ENST00000616030 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
LINC00649-217ENST00000616030 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
LINC00649-217ENST00000616030 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
LINC00649-217ENST00000616030 ADM2Q7Z4H4 148 aa4.81□□□□□ -1.64
LINC00649-217ENST00000616030 PSPHP1O15172 72 aa4.79□□□□□ -1.64
LINC00649-217ENST00000616030 Q5VV11 94 aa4.76□□□□□ -1.65
LINC00649-217ENST00000616030 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
LINC00649-217ENST00000616030 A0A1B0GU33 70 aa4.74□□□□□ -1.65
LINC00649-217ENST00000616030 P0C880 135 aa4.73□□□□□ -1.65
LINC00649-217ENST00000616030 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
LINC00649-217ENST00000616030 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
LINC00649-217ENST00000616030 UQCR11O14957 56 aa4.71□□□□□ -1.66
LINC00649-217ENST00000616030 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
LINC00649-217ENST00000616030 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
LINC00649-217ENST00000616030 M0QZ58 72 aa4.69□□□□□ -1.66
LINC00649-217ENST00000616030 A6NED7 52 aa4.68□□□□□ -1.66
LINC00649-217ENST00000616030 MT1BP07438 61 aa4.68□□□□□ -1.66
LINC00649-217ENST00000616030 R4GN34 69 aa4.66□□□□□ -1.66
LINC00649-217ENST00000616030 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
LINC00649-217ENST00000616030 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
LINC00649-217ENST00000616030 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
LINC00649-217ENST00000616030 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
LINC00649-217ENST00000616030 KRTAP13-4Q3LI77 160 aa4.6□□□□□ -1.67
LINC00649-217ENST00000616030 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
LINC00649-217ENST00000616030 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
LINC00649-217ENST00000616030 A6NN06 94 aa4.56□□□□□ -1.68
LINC00649-217ENST00000616030 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
LINC00649-217ENST00000616030 A0A0D9SG42 100 aa4.53□□□□□ -1.68
LINC00649-217ENST00000616030 A8MU10 97 aa4.53□□□□□ -1.68
LINC00649-217ENST00000616030 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
LINC00649-217ENST00000616030 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
LINC00649-217ENST00000616030 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
LINC00649-217ENST00000616030 K7ERS5 55 aa4.49□□□□□ -1.69
LINC00649-217ENST00000616030 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
LINC00649-217ENST00000616030 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
LINC00649-217ENST00000616030 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
LINC00649-217ENST00000616030 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
LINC00649-217ENST00000616030 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
LINC00649-217ENST00000616030 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
LINC00649-217ENST00000616030 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
LINC00649-217ENST00000616030 MT1XP80297 61 aa4.39□□□□□ -1.71
LINC00649-217ENST00000616030 PRO2289Q9P1D8 64 aa4.37□□□□□ -1.71
LINC00649-217ENST00000616030 KMT2DO14686 5537 aa4.37□□□□□ -1.71
LINC00649-217ENST00000616030 NEBP20929 6669 aa4.36□□□□□ -1.71
LINC00649-217ENST00000616030 CAMK2N1Q7Z7J9 78 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms