RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
LSP1-217ENST00000612798 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
LSP1-217ENST00000612798 MUC2Q02817 5179 aa8.68□□□□□ -1.02
LSP1-217ENST00000612798 UBR4Q5T4S7 5183 aa8.66□□□□□ -1.02
LSP1-217ENST00000612798 COX6B2Q6YFQ2 88 aa8.66□□□□□ -1.02
LSP1-217ENST00000612798 A6NED7 52 aa8.6□□□□□ -1.03
LSP1-217ENST00000612798 RBM12B-AS1Q9P1G2 102 aa8.6□□□□□ -1.03
LSP1-217ENST00000612798 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
LSP1-217ENST00000612798 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
LSP1-217ENST00000612798 A8MU10 97 aa8.53□□□□□ -1.04
LSP1-217ENST00000612798 LCA10Q71F78 164 aa8.52□□□□□ -1.05
LSP1-217ENST00000612798 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
LSP1-217ENST00000612798 CDC42SE1Q9NRR8 79 aa8.49□□□□□ -1.05
LSP1-217ENST00000612798 A0A1B0GU69 56 aa8.47□□□□□ -1.05
LSP1-217ENST00000612798 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
LSP1-217ENST00000612798 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
LSP1-217ENST00000612798 S4R3F8 94 aa8.41□□□□□ -1.06
LSP1-217ENST00000612798 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.07
LSP1-217ENST00000612798 PMAIP1Q13794 54 aa8.39□□□□□ -1.07
LSP1-217ENST00000612798 FAT4Q6V0I7 4981 aa8.31□□□□□ -1.08
LSP1-217ENST00000612798 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
LSP1-217ENST00000612798 UQCR11O14957 56 aa8.29□□□□□ -1.08
LSP1-217ENST00000612798 SEC61GP60059 68 aa8.28□□□□□ -1.08
LSP1-217ENST00000612798 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
LSP1-217ENST00000612798 A6NN06 94 aa8.26□□□□□ -1.09
LSP1-217ENST00000612798 MT1HP80294 61 aa8.25□□□□□ -1.09
LSP1-217ENST00000612798 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
LSP1-217ENST00000612798 CSAG1Q6PB30 78 aa8.21□□□□□ -1.09
LSP1-217ENST00000612798 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
LSP1-217ENST00000612798 M0R2T5 61 aa8.15□□□□□ -1.1
LSP1-217ENST00000612798 A0A1B0GU33 70 aa8.06□□□□□ -1.12
LSP1-217ENST00000612798 ADM2Q7Z4H4 148 aa8.05□□□□□ -1.12
LSP1-217ENST00000612798 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
LSP1-217ENST00000612798 H0YAA0 97 aa8.02□□□□□ -1.13
LSP1-217ENST00000612798 P0C880 135 aa8.02□□□□□ -1.13
LSP1-217ENST00000612798 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
LSP1-217ENST00000612798 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
LSP1-217ENST00000612798 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
LSP1-217ENST00000612798 KRTAP9-8Q9BYQ0 159 aa7.93□□□□□ -1.14
LSP1-217ENST00000612798 MT2AP02795 61 aa7.89□□□□□ -1.15
LSP1-217ENST00000612798 MT1FP04733 61 aa7.86□□□□□ -1.15
LSP1-217ENST00000612798 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
LSP1-217ENST00000612798 KRTAP10-10P60014 251 aa7.82□□□□□ -1.16
LSP1-217ENST00000612798 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
LSP1-217ENST00000612798 K7ERS5 55 aa7.77□□□□□ -1.17
LSP1-217ENST00000612798 M0QZ58 72 aa7.75□□□□□ -1.17
LSP1-217ENST00000612798 R4GN34 69 aa7.74□□□□□ -1.17
LSP1-217ENST00000612798 A0A0D9SG42 100 aa7.67□□□□□ -1.18
LSP1-217ENST00000612798 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
LSP1-217ENST00000612798 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
LSP1-217ENST00000612798 CRIPTQ9P021 101 aa7.65□□□□□ -1.18
LSP1-217ENST00000612798 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
LSP1-217ENST00000612798 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
LSP1-217ENST00000612798 ROMO1P60602 79 aa7.53□□□□□ -1.2
LSP1-217ENST00000612798 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
LSP1-217ENST00000612798 LCE2BO14633 110 aa7.49□□□□□ -1.21
LSP1-217ENST00000612798 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
LSP1-217ENST00000612798 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
LSP1-217ENST00000612798 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.22
LSP1-217ENST00000612798 KRTAP19-8Q3LI54 63 aa7.43□□□□□ -1.22
LSP1-217ENST00000612798 MT1BP07438 61 aa7.4□□□□□ -1.23
LSP1-217ENST00000612798 PLAC4Q8WY50 150 aa7.32□□□□□ -1.24
LSP1-217ENST00000612798 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
LSP1-217ENST00000612798 USH2AO75445 5202 aa7.26□□□□□ -1.25
LSP1-217ENST00000612798 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
LSP1-217ENST00000612798 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
LSP1-217ENST00000612798 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.27
LSP1-217ENST00000612798 MT1XP80297 61 aa7.13□□□□□ -1.27
LSP1-217ENST00000612798 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
LSP1-217ENST00000612798 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
LSP1-217ENST00000612798 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
LSP1-217ENST00000612798 KRTAP19-6Q3LI70 58 aa7□□□□□ -1.29
LSP1-217ENST00000612798 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.29
LSP1-217ENST00000612798 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
LSP1-217ENST00000612798 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
LSP1-217ENST00000612798 TNP1P09430 55 aa6.83□□□□□ -1.32
LSP1-217ENST00000612798 PP632Q6XCG6 107 aa6.78□□□□□ -1.32
LSP1-217ENST00000612798 FCGBPQ9Y6R7 5405 aaPredicted RBP6.78□□□□□ -1.32
LSP1-217ENST00000612798 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
LSP1-217ENST00000612798 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
LSP1-217ENST00000612798 KRTAP4-8A0A0G2JLE6 195 aa6.66□□□□□ -1.34
LSP1-217ENST00000612798 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
LSP1-217ENST00000612798 LCE3AQ5TA76 89 aa6.65□□□□□ -1.34
LSP1-217ENST00000612798 KMT2DO14686 5537 aa6.63□□□□□ -1.35
LSP1-217ENST00000612798 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
LSP1-217ENST00000612798 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
LSP1-217ENST00000612798 H3BS24 57 aa6.5□□□□□ -1.37
LSP1-217ENST00000612798 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
LSP1-217ENST00000612798 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
LSP1-217ENST00000612798 KRTAP19-5Q3LI72 72 aa6.42□□□□□ -1.38
LSP1-217ENST00000612798 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
LSP1-217ENST00000612798 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
LSP1-217ENST00000612798 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
LSP1-217ENST00000612798 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
LSP1-217ENST00000612798 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
LSP1-217ENST00000612798 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
LSP1-217ENST00000612798 MT1EP04732 61 aa6.24□□□□□ -1.41
LSP1-217ENST00000612798 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
LSP1-217ENST00000612798 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
LSP1-217ENST00000612798 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms