RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
U2AF1L4-220ENST00000600296 COA5Q86WW8 74 aa8.07□□□□□ -1.12
U2AF1L4-220ENST00000600296 S4R3F8 94 aa8.06□□□□□ -1.12
U2AF1L4-220ENST00000600296 LCA10Q71F78 164 aa8.03□□□□□ -1.12
U2AF1L4-220ENST00000600296 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
U2AF1L4-220ENST00000600296 SERP1Q9Y6X1 66 aa8.02□□□□□ -1.13
U2AF1L4-220ENST00000600296 MT1HP80294 61 aa7.99□□□□□ -1.13
U2AF1L4-220ENST00000600296 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
U2AF1L4-220ENST00000600296 RPS28P62857 69 aaKnown RBP7.91□□□□□ -1.14
U2AF1L4-220ENST00000600296 SPTSSBQ8NFR3 76 aa7.9□□□□□ -1.14
U2AF1L4-220ENST00000600296 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
U2AF1L4-220ENST00000600296 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
U2AF1L4-220ENST00000600296 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
U2AF1L4-220ENST00000600296 H0YAA0 97 aa7.78□□□□□ -1.16
U2AF1L4-220ENST00000600296 M0R2T5 61 aa7.78□□□□□ -1.16
U2AF1L4-220ENST00000600296 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
U2AF1L4-220ENST00000600296 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
U2AF1L4-220ENST00000600296 SMIM26A0A096LP01 95 aa7.76□□□□□ -1.17
U2AF1L4-220ENST00000600296 LINC01558Q9Y6Z2 57 aa7.72□□□□□ -1.17
U2AF1L4-220ENST00000600296 FSIP2Q5CZC0 6907 aa7.71□□□□□ -1.18
U2AF1L4-220ENST00000600296 Q1T7F1 81 aa7.69□□□□□ -1.18
U2AF1L4-220ENST00000600296 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
U2AF1L4-220ENST00000600296 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
U2AF1L4-220ENST00000600296 V9GYY9 64 aa7.66□□□□□ -1.18
U2AF1L4-220ENST00000600296 ADM2Q7Z4H4 148 aa7.64□□□□□ -1.19
U2AF1L4-220ENST00000600296 MT2AP02795 61 aa7.63□□□□□ -1.19
U2AF1L4-220ENST00000600296 CRCT1Q9UGL9 99 aa7.63□□□□□ -1.19
U2AF1L4-220ENST00000600296 A0A1B0GU69 56 aa7.6□□□□□ -1.19
U2AF1L4-220ENST00000600296 P0C880 135 aa7.6□□□□□ -1.19
U2AF1L4-220ENST00000600296 SEC61GP60059 68 aa7.59□□□□□ -1.19
U2AF1L4-220ENST00000600296 MT1FP04733 61 aa7.57□□□□□ -1.2
U2AF1L4-220ENST00000600296 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
U2AF1L4-220ENST00000600296 Q5VV11 94 aa7.49□□□□□ -1.21
U2AF1L4-220ENST00000600296 CRIPTQ9P021 101 aa7.49□□□□□ -1.21
U2AF1L4-220ENST00000600296 PSPHP1O15172 72 aa7.48□□□□□ -1.21
U2AF1L4-220ENST00000600296 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
U2AF1L4-220ENST00000600296 A0A1B0GU33 70 aa7.44□□□□□ -1.22
U2AF1L4-220ENST00000600296 USH2AO75445 5202 aa7.44□□□□□ -1.22
U2AF1L4-220ENST00000600296 M0QZ58 72 aa7.41□□□□□ -1.22
U2AF1L4-220ENST00000600296 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
U2AF1L4-220ENST00000600296 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
U2AF1L4-220ENST00000600296 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
U2AF1L4-220ENST00000600296 R4GN34 69 aa7.39□□□□□ -1.23
U2AF1L4-220ENST00000600296 KRTAP19-1Q8IUB9 90 aa7.38□□□□□ -1.23
U2AF1L4-220ENST00000600296 SSPOA2VEC9 5147 aa7.37□□□□□ -1.23
U2AF1L4-220ENST00000600296 UQCR11O14957 56 aa7.35□□□□□ -1.23
U2AF1L4-220ENST00000600296 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
U2AF1L4-220ENST00000600296 LCE2BO14633 110 aa7.28□□□□□ -1.24
U2AF1L4-220ENST00000600296 A6NED7 52 aa7.26□□□□□ -1.25
U2AF1L4-220ENST00000600296 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
U2AF1L4-220ENST00000600296 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
U2AF1L4-220ENST00000600296 A6NN06 94 aa7.2□□□□□ -1.26
U2AF1L4-220ENST00000600296 A8MU10 97 aa7.19□□□□□ -1.26
U2AF1L4-220ENST00000600296 LINC01554Q52M75 96 aa7.18□□□□□ -1.26
U2AF1L4-220ENST00000600296 CDC42SE1Q9NRR8 79 aa7.17□□□□□ -1.26
U2AF1L4-220ENST00000600296 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
U2AF1L4-220ENST00000600296 A0A0D9SG42 100 aa7.15□□□□□ -1.26
U2AF1L4-220ENST00000600296 MT1BP07438 61 aa7.15□□□□□ -1.26
U2AF1L4-220ENST00000600296 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
U2AF1L4-220ENST00000600296 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
U2AF1L4-220ENST00000600296 KRTAP12-2P59991 146 aa7.06□□□□□ -1.28
U2AF1L4-220ENST00000600296 BRK1Q8WUW1 75 aa7.02□□□□□ -1.29
U2AF1L4-220ENST00000600296 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
U2AF1L4-220ENST00000600296 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
U2AF1L4-220ENST00000600296 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
U2AF1L4-220ENST00000600296 KRTAP19-6Q3LI70 58 aa6.97□□□□□ -1.29
U2AF1L4-220ENST00000600296 K7ERS5 55 aa6.93□□□□□ -1.3
U2AF1L4-220ENST00000600296 MT1XP80297 61 aa6.87□□□□□ -1.31
U2AF1L4-220ENST00000600296 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
U2AF1L4-220ENST00000600296 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
U2AF1L4-220ENST00000600296 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.32
U2AF1L4-220ENST00000600296 MACF1Q9UPN3 7388 aaKnown RBP6.81□□□□□ -1.32
U2AF1L4-220ENST00000600296 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
U2AF1L4-220ENST00000600296 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
U2AF1L4-220ENST00000600296 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
U2AF1L4-220ENST00000600296 ROMO1P60602 79 aa6.64□□□□□ -1.35
U2AF1L4-220ENST00000600296 PMAIP1Q13794 54 aa6.62□□□□□ -1.35
U2AF1L4-220ENST00000600296 KRTAP6-3Q3LI67 103 aa6.62□□□□□ -1.35
U2AF1L4-220ENST00000600296 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
U2AF1L4-220ENST00000600296 TNP1P09430 55 aa6.54□□□□□ -1.36
U2AF1L4-220ENST00000600296 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
U2AF1L4-220ENST00000600296 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
U2AF1L4-220ENST00000600296 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
U2AF1L4-220ENST00000600296 NEBP20929 6669 aa6.41□□□□□ -1.38
U2AF1L4-220ENST00000600296 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
U2AF1L4-220ENST00000600296 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
U2AF1L4-220ENST00000600296 KMT2DO14686 5537 aa6.33□□□□□ -1.4
U2AF1L4-220ENST00000600296 KRTAP5-9P26371 169 aa6.32□□□□□ -1.4
U2AF1L4-220ENST00000600296 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
U2AF1L4-220ENST00000600296 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
U2AF1L4-220ENST00000600296 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
U2AF1L4-220ENST00000600296 MDN1Q9NU22 5596 aa6.27□□□□□ -1.41
U2AF1L4-220ENST00000600296 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
U2AF1L4-220ENST00000600296 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
U2AF1L4-220ENST00000600296 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
U2AF1L4-220ENST00000600296 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
U2AF1L4-220ENST00000600296 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
U2AF1L4-220ENST00000600296 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
U2AF1L4-220ENST00000600296 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
U2AF1L4-220ENST00000600296 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms