RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
IRF3-225ENST00000600022 KRTAP9-8Q9BYQ0 159 aa7.06□□□□□ -1.28
IRF3-225ENST00000600022 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
IRF3-225ENST00000600022 FCGBPQ9Y6R7 5405 aaPredicted RBP6.97□□□□□ -1.29
IRF3-225ENST00000600022 SPINK7P58062 85 aa6.96□□□□□ -1.3
IRF3-225ENST00000600022 HRES1P13985 223 aa6.95□□□□□ -1.3
IRF3-225ENST00000600022 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
IRF3-225ENST00000600022 LCE2BO14633 110 aa6.91□□□□□ -1.3
IRF3-225ENST00000600022 MT2AP02795 61 aa6.91□□□□□ -1.3
IRF3-225ENST00000600022 ACYP2P14621 99 aa6.89□□□□□ -1.31
IRF3-225ENST00000600022 KRTAP19-1Q8IUB9 90 aa6.89□□□□□ -1.31
IRF3-225ENST00000600022 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
IRF3-225ENST00000600022 A8MUN3 132 aa6.87□□□□□ -1.31
IRF3-225ENST00000600022 MT1FP04733 61 aa6.87□□□□□ -1.31
IRF3-225ENST00000600022 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
IRF3-225ENST00000600022 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
IRF3-225ENST00000600022 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
IRF3-225ENST00000600022 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
IRF3-225ENST00000600022 COA5Q86WW8 74 aa6.81□□□□□ -1.32
IRF3-225ENST00000600022 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
IRF3-225ENST00000600022 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
IRF3-225ENST00000600022 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
IRF3-225ENST00000600022 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
IRF3-225ENST00000600022 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
IRF3-225ENST00000600022 MPLKIPQ8TAP9 179 aa6.75□□□□□ -1.33
IRF3-225ENST00000600022 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
IRF3-225ENST00000600022 V9GYY9 64 aa6.68□□□□□ -1.34
IRF3-225ENST00000600022 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
IRF3-225ENST00000600022 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
IRF3-225ENST00000600022 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
IRF3-225ENST00000600022 S4R3F8 94 aa6.62□□□□□ -1.35
IRF3-225ENST00000600022 Q1T7F1 81 aa6.59□□□□□ -1.35
IRF3-225ENST00000600022 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
IRF3-225ENST00000600022 SEC61GP60059 68 aa6.54□□□□□ -1.36
IRF3-225ENST00000600022 LCA10Q71F78 164 aa6.53□□□□□ -1.36
IRF3-225ENST00000600022 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
IRF3-225ENST00000600022 A0A1B0GU69 56 aa6.5□□□□□ -1.37
IRF3-225ENST00000600022 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
IRF3-225ENST00000600022 CSAG1Q6PB30 78 aa6.49□□□□□ -1.37
IRF3-225ENST00000600022 PSPHP1O15172 72 aa6.47□□□□□ -1.37
IRF3-225ENST00000600022 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
IRF3-225ENST00000600022 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
IRF3-225ENST00000600022 Q5VV11 94 aa6.38□□□□□ -1.39
IRF3-225ENST00000600022 NEBP20929 6669 aa6.35□□□□□ -1.39
IRF3-225ENST00000600022 A6NED7 52 aa6.34□□□□□ -1.39
IRF3-225ENST00000600022 H0YAA0 97 aa6.31□□□□□ -1.4
IRF3-225ENST00000600022 UQCR11O14957 56 aa6.3□□□□□ -1.4
IRF3-225ENST00000600022 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
IRF3-225ENST00000600022 MUC12Q9UKN1 5478 aa6.29□□□□□ -1.4
IRF3-225ENST00000600022 A0A1B0GU33 70 aa6.28□□□□□ -1.4
IRF3-225ENST00000600022 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
IRF3-225ENST00000600022 MT1BP07438 61 aa6.22□□□□□ -1.41
IRF3-225ENST00000600022 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
IRF3-225ENST00000600022 A6NN06 94 aa6.19□□□□□ -1.42
IRF3-225ENST00000600022 P0C880 135 aa6.18□□□□□ -1.42
IRF3-225ENST00000600022 CDC42SE1Q9NRR8 79 aa6.18□□□□□ -1.42
IRF3-225ENST00000600022 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
IRF3-225ENST00000600022 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
IRF3-225ENST00000600022 M0QZ58 72 aa6.15□□□□□ -1.42
IRF3-225ENST00000600022 R4GN34 69 aa6.12□□□□□ -1.43
IRF3-225ENST00000600022 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
IRF3-225ENST00000600022 KMT2DO14686 5537 aa6.1□□□□□ -1.43
IRF3-225ENST00000600022 CRIPTQ9P021 101 aa6.1□□□□□ -1.43
IRF3-225ENST00000600022 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
IRF3-225ENST00000600022 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
IRF3-225ENST00000600022 PRO0628Q9UI54 55 aa6.09□□□□□ -1.43
IRF3-225ENST00000600022 MDN1Q9NU22 5596 aa6.09□□□□□ -1.44
IRF3-225ENST00000600022 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
IRF3-225ENST00000600022 K7ERS5 55 aa6.06□□□□□ -1.44
IRF3-225ENST00000600022 A0A0D9SG42 100 aa6.02□□□□□ -1.45
IRF3-225ENST00000600022 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
IRF3-225ENST00000600022 A8MU10 97 aa6□□□□□ -1.45
IRF3-225ENST00000600022 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
IRF3-225ENST00000600022 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
IRF3-225ENST00000600022 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
IRF3-225ENST00000600022 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
IRF3-225ENST00000600022 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
IRF3-225ENST00000600022 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
IRF3-225ENST00000600022 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
IRF3-225ENST00000600022 SPRR2EP22531 72 aa5.82□□□□□ -1.48
IRF3-225ENST00000600022 SPRR2BP35325 72 aa5.82□□□□□ -1.48
IRF3-225ENST00000600022 SPRR2AP35326 72 aa5.82□□□□□ -1.48
IRF3-225ENST00000600022 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
IRF3-225ENST00000600022 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
IRF3-225ENST00000600022 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
IRF3-225ENST00000600022 MT1XP80297 61 aa5.75□□□□□ -1.49
IRF3-225ENST00000600022 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
IRF3-225ENST00000600022 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
IRF3-225ENST00000600022 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
IRF3-225ENST00000600022 ROMO1P60602 79 aa5.69□□□□□ -1.5
IRF3-225ENST00000600022 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
IRF3-225ENST00000600022 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
IRF3-225ENST00000600022 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
IRF3-225ENST00000600022 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
IRF3-225ENST00000600022 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
IRF3-225ENST00000600022 SPRR2DP22532 72 aa5.62□□□□□ -1.51
IRF3-225ENST00000600022 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
IRF3-225ENST00000600022 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
IRF3-225ENST00000600022 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
IRF3-225ENST00000600022 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms