RNA–Protein interactions for RNA: ENST00000599804.5

SMG9-209, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-209ENST00000599804 CCDC179H3BU77 68 aa7.97□□□□□ -1.13
SMG9-209ENST00000599804 LORP23490 312 aaPredicted RBP7.97□□□□□ -1.13
SMG9-209ENST00000599804 H7BZZ5 65 aa7.96□□□□□ -1.14
SMG9-209ENST00000599804 CSAG1Q6PB30 78 aa7.94□□□□□ -1.14
SMG9-209ENST00000599804 CYSTM1Q9H1C7 97 aa7.93□□□□□ -1.14
SMG9-209ENST00000599804 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
SMG9-209ENST00000599804 KRTAP9-8Q9BYQ0 159 aa7.86□□□□□ -1.15
SMG9-209ENST00000599804 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
SMG9-209ENST00000599804 ATP5EP56381 51 aaPredicted RBP7.81□□□□□ -1.16
SMG9-209ENST00000599804 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
SMG9-209ENST00000599804 MT2AP02795 61 aa7.79□□□□□ -1.16
SMG9-209ENST00000599804 TMEM258P61165 79 aa7.77□□□□□ -1.17
SMG9-209ENST00000599804 COA5Q86WW8 74 aa7.76□□□□□ -1.17
SMG9-209ENST00000599804 H0YAA0 97 aa7.74□□□□□ -1.17
SMG9-209ENST00000599804 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
SMG9-209ENST00000599804 MT1FP04733 61 aa7.73□□□□□ -1.17
SMG9-209ENST00000599804 PCP4P48539 62 aa7.7□□□□□ -1.18
SMG9-209ENST00000599804 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
SMG9-209ENST00000599804 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
SMG9-209ENST00000599804 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
SMG9-209ENST00000599804 KRTAP9-2Q9BYQ4 174 aa7.54□□□□□ -1.2
SMG9-209ENST00000599804 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
SMG9-209ENST00000599804 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
SMG9-209ENST00000599804 P0C880 135 aa7.49□□□□□ -1.21
SMG9-209ENST00000599804 SEC61GP60059 68 aa7.48□□□□□ -1.21
SMG9-209ENST00000599804 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
SMG9-209ENST00000599804 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
SMG9-209ENST00000599804 LCE2BO14633 110 aa7.43□□□□□ -1.22
SMG9-209ENST00000599804 R4GN34 69 aa7.43□□□□□ -1.22
SMG9-209ENST00000599804 A0A1B0GU69 56 aa7.37□□□□□ -1.23
SMG9-209ENST00000599804 M0QZ58 72 aa7.37□□□□□ -1.23
SMG9-209ENST00000599804 LINC01558Q9Y6Z2 57 aa7.34□□□□□ -1.23
SMG9-209ENST00000599804 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
SMG9-209ENST00000599804 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
SMG9-209ENST00000599804 USH2AO75445 5202 aa7.31□□□□□ -1.24
SMG9-209ENST00000599804 Q5VV11 94 aa7.31□□□□□ -1.24
SMG9-209ENST00000599804 RPS28P62857 69 aaKnown RBP7.3□□□□□ -1.24
SMG9-209ENST00000599804 V9GYY9 64 aa7.28□□□□□ -1.24
SMG9-209ENST00000599804 A0A1B0GU33 70 aa7.27□□□□□ -1.25
SMG9-209ENST00000599804 SMIM26A0A096LP01 95 aa7.25□□□□□ -1.25
SMG9-209ENST00000599804 MT1BP07438 61 aa7.23□□□□□ -1.25
SMG9-209ENST00000599804 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
SMG9-209ENST00000599804 Q1T7F1 81 aa7.21□□□□□ -1.26
SMG9-209ENST00000599804 LINC01554Q52M75 96 aa7.21□□□□□ -1.26
SMG9-209ENST00000599804 KRTAP13-4Q3LI77 160 aa7.2□□□□□ -1.26
SMG9-209ENST00000599804 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
SMG9-209ENST00000599804 FSIP2Q5CZC0 6907 aa7.15□□□□□ -1.26
SMG9-209ENST00000599804 A6NN06 94 aa7.15□□□□□ -1.26
SMG9-209ENST00000599804 PLAC4Q8WY50 150 aa7.15□□□□□ -1.26
SMG9-209ENST00000599804 KRTAP9-6A0A140TA67 174 aa7.13□□□□□ -1.27
SMG9-209ENST00000599804 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
SMG9-209ENST00000599804 SPATA8Q6RVD6 105 aa7.13□□□□□ -1.27
SMG9-209ENST00000599804 UQCR11O14957 56 aa7.09□□□□□ -1.27
SMG9-209ENST00000599804 PSPHP1O15172 72 aa7.06□□□□□ -1.28
SMG9-209ENST00000599804 A0A0D9SG42 100 aa7.04□□□□□ -1.28
SMG9-209ENST00000599804 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
SMG9-209ENST00000599804 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
SMG9-209ENST00000599804 A8MU10 97 aa6.95□□□□□ -1.3
SMG9-209ENST00000599804 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
SMG9-209ENST00000599804 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
SMG9-209ENST00000599804 SPINT4Q6UDR6 99 aa6.93□□□□□ -1.3
SMG9-209ENST00000599804 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
SMG9-209ENST00000599804 MT1XP80297 61 aa6.9□□□□□ -1.3
SMG9-209ENST00000599804 A6NED7 52 aa6.89□□□□□ -1.31
SMG9-209ENST00000599804 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
SMG9-209ENST00000599804 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
SMG9-209ENST00000599804 K7ERS5 55 aa6.77□□□□□ -1.33
SMG9-209ENST00000599804 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
SMG9-209ENST00000599804 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
SMG9-209ENST00000599804 KRTAP10-7P60409 375 aaPredicted RBP6.59□□□□□ -1.35
SMG9-209ENST00000599804 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
SMG9-209ENST00000599804 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
SMG9-209ENST00000599804 MACF1Q9UPN3 7388 aaKnown RBP6.55□□□□□ -1.36
SMG9-209ENST00000599804 TNP1P09430 55 aa6.51□□□□□ -1.37
SMG9-209ENST00000599804 BRK1Q8WUW1 75 aa6.48□□□□□ -1.37
SMG9-209ENST00000599804 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
SMG9-209ENST00000599804 KMT2DO14686 5537 aa6.45□□□□□ -1.38
SMG9-209ENST00000599804 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
SMG9-209ENST00000599804 KRTAP6-3Q3LI67 103 aa6.45□□□□□ -1.38
SMG9-209ENST00000599804 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
SMG9-209ENST00000599804 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
SMG9-209ENST00000599804 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
SMG9-209ENST00000599804 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
SMG9-209ENST00000599804 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
SMG9-209ENST00000599804 KRTAP5-9P26371 169 aa6.36□□□□□ -1.39
SMG9-209ENST00000599804 ROMO1P60602 79 aa6.36□□□□□ -1.39
SMG9-209ENST00000599804 SYNE2Q8WXH0 6885 aaKnown RBP6.34□□□□□ -1.39
SMG9-209ENST00000599804 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
SMG9-209ENST00000599804 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
SMG9-209ENST00000599804 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
SMG9-209ENST00000599804 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
SMG9-209ENST00000599804 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
SMG9-209ENST00000599804 KRTAP19-5Q3LI72 72 aa6.14□□□□□ -1.43
SMG9-209ENST00000599804 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
SMG9-209ENST00000599804 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
SMG9-209ENST00000599804 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
SMG9-209ENST00000599804 MT1EP04732 61 aa6.09□□□□□ -1.43
SMG9-209ENST00000599804 SPRR2EP22531 72 aa6.07□□□□□ -1.44
SMG9-209ENST00000599804 SPRR2BP35325 72 aa6.07□□□□□ -1.44
SMG9-209ENST00000599804 SPRR2AP35326 72 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms