RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 H1FX-AS1Q4G0G2 97 aa5.71□□□□□ -1.5
SH2D3A-206ENST00000597254 TMEM258P61165 79 aa5.7□□□□□ -1.5
SH2D3A-206ENST00000597254 ACYP2P14621 99 aa5.69□□□□□ -1.5
SH2D3A-206ENST00000597254 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
SH2D3A-206ENST00000597254 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
SH2D3A-206ENST00000597254 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
SH2D3A-206ENST00000597254 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.5
SH2D3A-206ENST00000597254 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
SH2D3A-206ENST00000597254 S4R3F8 94 aa5.62□□□□□ -1.51
SH2D3A-206ENST00000597254 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
SH2D3A-206ENST00000597254 COA5Q86WW8 74 aa5.6□□□□□ -1.51
SH2D3A-206ENST00000597254 LCA10Q71F78 164 aa5.59□□□□□ -1.51
SH2D3A-206ENST00000597254 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
SH2D3A-206ENST00000597254 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
SH2D3A-206ENST00000597254 SERP1Q9Y6X1 66 aa5.53□□□□□ -1.52
SH2D3A-206ENST00000597254 CSAG1Q6PB30 78 aa5.52□□□□□ -1.53
SH2D3A-206ENST00000597254 SPTSSBQ8NFR3 76 aa5.5□□□□□ -1.53
SH2D3A-206ENST00000597254 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
SH2D3A-206ENST00000597254 KRTAP9-8Q9BYQ0 159 aa5.42□□□□□ -1.54
SH2D3A-206ENST00000597254 SMIM26A0A096LP01 95 aa5.37□□□□□ -1.55
SH2D3A-206ENST00000597254 H0YAA0 97 aa5.37□□□□□ -1.55
SH2D3A-206ENST00000597254 USH2AO75445 5202 aa5.36□□□□□ -1.55
SH2D3A-206ENST00000597254 MT2AP02795 61 aa5.35□□□□□ -1.55
SH2D3A-206ENST00000597254 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
SH2D3A-206ENST00000597254 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
SH2D3A-206ENST00000597254 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
SH2D3A-206ENST00000597254 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
SH2D3A-206ENST00000597254 SEC61GP60059 68 aa5.32□□□□□ -1.56
SH2D3A-206ENST00000597254 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
SH2D3A-206ENST00000597254 A0A1B0GU69 56 aa5.3□□□□□ -1.56
SH2D3A-206ENST00000597254 MT1FP04733 61 aa5.3□□□□□ -1.56
SH2D3A-206ENST00000597254 Q1T7F1 81 aa5.3□□□□□ -1.56
SH2D3A-206ENST00000597254 V9GYY9 64 aa5.3□□□□□ -1.56
SH2D3A-206ENST00000597254 P0C880 135 aa5.29□□□□□ -1.56
SH2D3A-206ENST00000597254 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
SH2D3A-206ENST00000597254 LCE2BO14633 110 aa5.25□□□□□ -1.57
SH2D3A-206ENST00000597254 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
SH2D3A-206ENST00000597254 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
SH2D3A-206ENST00000597254 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
SH2D3A-206ENST00000597254 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
SH2D3A-206ENST00000597254 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
SH2D3A-206ENST00000597254 A0A1B0GU33 70 aa5.2□□□□□ -1.58
SH2D3A-206ENST00000597254 PSPHP1O15172 72 aa5.2□□□□□ -1.58
SH2D3A-206ENST00000597254 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
SH2D3A-206ENST00000597254 Q5VV11 94 aa5.17□□□□□ -1.58
SH2D3A-206ENST00000597254 R4GN34 69 aa5.16□□□□□ -1.58
SH2D3A-206ENST00000597254 M0QZ58 72 aa5.15□□□□□ -1.59
SH2D3A-206ENST00000597254 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
SH2D3A-206ENST00000597254 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
SH2D3A-206ENST00000597254 UQCR11O14957 56 aa5.11□□□□□ -1.59
SH2D3A-206ENST00000597254 SPATA8Q6RVD6 105 aa5.11□□□□□ -1.59
SH2D3A-206ENST00000597254 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
SH2D3A-206ENST00000597254 A6NED7 52 aa5.05□□□□□ -1.6
SH2D3A-206ENST00000597254 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
SH2D3A-206ENST00000597254 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
SH2D3A-206ENST00000597254 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
SH2D3A-206ENST00000597254 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
SH2D3A-206ENST00000597254 A0A0D9SG42 100 aa5.02□□□□□ -1.61
SH2D3A-206ENST00000597254 A8MU10 97 aa5.02□□□□□ -1.61
SH2D3A-206ENST00000597254 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
SH2D3A-206ENST00000597254 MT1BP07438 61 aa4.98□□□□□ -1.61
SH2D3A-206ENST00000597254 A6NN06 94 aa4.96□□□□□ -1.62
SH2D3A-206ENST00000597254 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
SH2D3A-206ENST00000597254 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
SH2D3A-206ENST00000597254 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
SH2D3A-206ENST00000597254 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
SH2D3A-206ENST00000597254 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
SH2D3A-206ENST00000597254 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
SH2D3A-206ENST00000597254 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
SH2D3A-206ENST00000597254 K7ERS5 55 aa4.83□□□□□ -1.64
SH2D3A-206ENST00000597254 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
SH2D3A-206ENST00000597254 MT1XP80297 61 aa4.77□□□□□ -1.65
SH2D3A-206ENST00000597254 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
SH2D3A-206ENST00000597254 NEBP20929 6669 aa4.73□□□□□ -1.65
SH2D3A-206ENST00000597254 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
SH2D3A-206ENST00000597254 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
SH2D3A-206ENST00000597254 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
SH2D3A-206ENST00000597254 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
SH2D3A-206ENST00000597254 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
SH2D3A-206ENST00000597254 ROMO1P60602 79 aa4.61□□□□□ -1.67
SH2D3A-206ENST00000597254 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
SH2D3A-206ENST00000597254 KMT2DO14686 5537 aa4.61□□□□□ -1.67
SH2D3A-206ENST00000597254 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
SH2D3A-206ENST00000597254 MDN1Q9NU22 5596 aa4.59□□□□□ -1.67
SH2D3A-206ENST00000597254 TNP1P09430 55 aa4.57□□□□□ -1.68
SH2D3A-206ENST00000597254 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
SH2D3A-206ENST00000597254 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
SH2D3A-206ENST00000597254 KRTAP25-1Q3LHN0 102 aa4.53□□□□□ -1.68
SH2D3A-206ENST00000597254 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
SH2D3A-206ENST00000597254 KRTAP2-3P0C7H8 128 aa4.46□□□□□ -1.7
SH2D3A-206ENST00000597254 SPRR2EP22531 72 aa4.46□□□□□ -1.7
SH2D3A-206ENST00000597254 SPRR2BP35325 72 aa4.46□□□□□ -1.7
SH2D3A-206ENST00000597254 SPRR2AP35326 72 aa4.46□□□□□ -1.7
SH2D3A-206ENST00000597254 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
SH2D3A-206ENST00000597254 KRTAP2-4Q9BYR9 128 aa4.46□□□□□ -1.7
SH2D3A-206ENST00000597254 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
SH2D3A-206ENST00000597254 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
SH2D3A-206ENST00000597254 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
SH2D3A-206ENST00000597254 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
SH2D3A-206ENST00000597254 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms