RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 S4R3F8 94 aa11.49□□□□□ -0.57
SPTBN4-210ENST00000596900 LCA10Q71F78 164 aa11.43□□□□□ -0.58
SPTBN4-210ENST00000596900 LINC01558Q9Y6Z2 57 aa11.4□□□□□ -0.58
SPTBN4-210ENST00000596900 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
SPTBN4-210ENST00000596900 KRTAP19-2Q3LHN2 52 aa11.32□□□□□ -0.6
SPTBN4-210ENST00000596900 MUC2Q02817 5179 aa11.3□□□□□ -0.6
SPTBN4-210ENST00000596900 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
SPTBN4-210ENST00000596900 PSPHP1O15172 72 aa11.28□□□□□ -0.6
SPTBN4-210ENST00000596900 A0A1B0GU69 56 aa11.27□□□□□ -0.6
SPTBN4-210ENST00000596900 SEC61GP60059 68 aa11.25□□□□□ -0.61
SPTBN4-210ENST00000596900 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
SPTBN4-210ENST00000596900 UBR4Q5T4S7 5183 aa11.24□□□□□ -0.61
SPTBN4-210ENST00000596900 Q5VV11 94 aa11.17□□□□□ -0.62
SPTBN4-210ENST00000596900 RNF213Q63HN8 5207 aa11.13□□□□□ -0.63
SPTBN4-210ENST00000596900 LCE2CQ5TA81 110 aa11.06□□□□□ -0.64
SPTBN4-210ENST00000596900 FLGP20930 4061 aaPredicted RBP11.02□□□□□ -0.64
SPTBN4-210ENST00000596900 H0YAA0 97 aa11□□□□□ -0.65
SPTBN4-210ENST00000596900 A6NED7 52 aa10.98□□□□□ -0.65
SPTBN4-210ENST00000596900 ADM2Q7Z4H4 148 aa10.95□□□□□ -0.66
SPTBN4-210ENST00000596900 UQCR11O14957 56 aa10.94□□□□□ -0.66
SPTBN4-210ENST00000596900 KRTAP10-6P60371 365 aaPredicted RBP10.92□□□□□ -0.66
SPTBN4-210ENST00000596900 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
SPTBN4-210ENST00000596900 A0A1B0GU33 70 aa10.91□□□□□ -0.66
SPTBN4-210ENST00000596900 MT1HP80294 61 aa10.89□□□□□ -0.67
SPTBN4-210ENST00000596900 M0R2T5 61 aa10.87□□□□□ -0.67
SPTBN4-210ENST00000596900 FAT4Q6V0I7 4981 aa10.86□□□□□ -0.67
SPTBN4-210ENST00000596900 P0C880 135 aa10.85□□□□□ -0.67
SPTBN4-210ENST00000596900 BRK1Q8WUW1 75 aa10.85□□□□□ -0.67
SPTBN4-210ENST00000596900 MIR22HGQ0VDD5 57 aa10.78□□□□□ -0.68
SPTBN4-210ENST00000596900 CDC42SE1Q9NRR8 79 aa10.77□□□□□ -0.69
SPTBN4-210ENST00000596900 SPATA8Q6RVD6 105 aa10.74□□□□□ -0.69
SPTBN4-210ENST00000596900 M0QZ58 72 aa10.66□□□□□ -0.7
SPTBN4-210ENST00000596900 R4GN34 69 aa10.62□□□□□ -0.71
SPTBN4-210ENST00000596900 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
SPTBN4-210ENST00000596900 A8MU10 97 aa10.61□□□□□ -0.71
SPTBN4-210ENST00000596900 KRTAP13-4Q3LI77 160 aa10.6□□□□□ -0.71
SPTBN4-210ENST00000596900 PRO0628Q9UI54 55 aa10.59□□□□□ -0.71
SPTBN4-210ENST00000596900 CRIPTQ9P021 101 aa10.55□□□□□ -0.72
SPTBN4-210ENST00000596900 LORP23490 312 aaPredicted RBP10.53□□□□□ -0.72
SPTBN4-210ENST00000596900 A0A0D9SG42 100 aa10.47□□□□□ -0.73
SPTBN4-210ENST00000596900 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
SPTBN4-210ENST00000596900 KRTAP9-8Q9BYQ0 159 aa10.47□□□□□ -0.73
SPTBN4-210ENST00000596900 MT2AP02795 61 aa10.44□□□□□ -0.74
SPTBN4-210ENST00000596900 KRTAP10-10P60014 251 aa10.41□□□□□ -0.74
SPTBN4-210ENST00000596900 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
SPTBN4-210ENST00000596900 K7ERS5 55 aa10.38□□□□□ -0.75
SPTBN4-210ENST00000596900 MT1FP04733 61 aa10.38□□□□□ -0.75
SPTBN4-210ENST00000596900 SPRR2GQ9BYE4 73 aa10.27□□□□□ -0.77
SPTBN4-210ENST00000596900 PMAIP1Q13794 54 aa10.25□□□□□ -0.77
SPTBN4-210ENST00000596900 SPINT4Q6UDR6 99 aa10.25□□□□□ -0.77
SPTBN4-210ENST00000596900 KRTAP12-1P59990 96 aa10.24□□□□□ -0.77
SPTBN4-210ENST00000596900 A6NN06 94 aa10.23□□□□□ -0.77
SPTBN4-210ENST00000596900 KRTAP12-2P59991 146 aa10.21□□□□□ -0.78
SPTBN4-210ENST00000596900 KRTAP19-1Q8IUB9 90 aa10.19□□□□□ -0.78
SPTBN4-210ENST00000596900 KRTAP9-3Q9BYQ3 159 aa10.09□□□□□ -0.79
SPTBN4-210ENST00000596900 KRTAP19-8Q3LI54 63 aa9.99□□□□□ -0.81
SPTBN4-210ENST00000596900 PLAC4Q8WY50 150 aa9.99□□□□□ -0.81
SPTBN4-210ENST00000596900 CAMK2N1Q7Z7J9 78 aa9.96□□□□□ -0.82
SPTBN4-210ENST00000596900 ROMO1P60602 79 aa9.87□□□□□ -0.83
SPTBN4-210ENST00000596900 KTN1-AS1Q86SY8 53 aa9.83□□□□□ -0.84
SPTBN4-210ENST00000596900 MT1BP07438 61 aa9.82□□□□□ -0.84
SPTBN4-210ENST00000596900 LCE2BO14633 110 aa9.79□□□□□ -0.84
SPTBN4-210ENST00000596900 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
SPTBN4-210ENST00000596900 PRAC1Q96KF2 57 aa9.53□□□□□ -0.88
SPTBN4-210ENST00000596900 PRO2289Q9P1D8 64 aa9.53□□□□□ -0.88
SPTBN4-210ENST00000596900 LCE2DQ5TA82 110 aaPredicted RBP9.53□□□□□ -0.88
SPTBN4-210ENST00000596900 MT1XP80297 61 aa9.51□□□□□ -0.89
SPTBN4-210ENST00000596900 KRTAP25-1Q3LHN0 102 aa9.5□□□□□ -0.89
SPTBN4-210ENST00000596900 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
SPTBN4-210ENST00000596900 TNP1P09430 55 aa9.47□□□□□ -0.89
SPTBN4-210ENST00000596900 USH2AO75445 5202 aa9.44□□□□□ -0.9
SPTBN4-210ENST00000596900 KRTAP19-6Q3LI70 58 aa9.25□□□□□ -0.93
SPTBN4-210ENST00000596900 PP632Q6XCG6 107 aa9.21□□□□□ -0.94
SPTBN4-210ENST00000596900 SSPOA2VEC9 5147 aa9.19□□□□□ -0.94
SPTBN4-210ENST00000596900 KRTAP23-1A1A580 65 aa9.17□□□□□ -0.94
SPTBN4-210ENST00000596900 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.95
SPTBN4-210ENST00000596900 KRTAP10-7P60409 375 aaPredicted RBP9.12□□□□□ -0.95
SPTBN4-210ENST00000596900 FSIP2Q5CZC0 6907 aa9.12□□□□□ -0.95
SPTBN4-210ENST00000596900 KRTAP10-12P60413 245 aa9.08□□□□□ -0.96
SPTBN4-210ENST00000596900 LCE3AQ5TA76 89 aa9□□□□□ -0.97
SPTBN4-210ENST00000596900 KRTAP8-1Q8IUC2 63 aa8.83□□□□□ -1
SPTBN4-210ENST00000596900 CRCT1Q9UGL9 99 aa8.83□□□□□ -1
SPTBN4-210ENST00000596900 FCGBPQ9Y6R7 5405 aaPredicted RBP8.77□□□□□ -1
SPTBN4-210ENST00000596900 KRTAP4-8A0A0G2JLE6 195 aa8.74□□□□□ -1.01
SPTBN4-210ENST00000596900 KRTAP4-8Q9BYQ9 185 aa8.74□□□□□ -1.01
SPTBN4-210ENST00000596900 KRTAP12-3P60328 96 aa8.67□□□□□ -1.02
SPTBN4-210ENST00000596900 KMT2DO14686 5537 aa8.65□□□□□ -1.02
SPTBN4-210ENST00000596900 KRTAP19-5Q3LI72 72 aa8.6□□□□□ -1.03
SPTBN4-210ENST00000596900 KRTAP15-1Q3LI76 137 aa8.49□□□□□ -1.05
SPTBN4-210ENST00000596900 KRTAP19-7Q3SYF9 63 aa8.47□□□□□ -1.05
SPTBN4-210ENST00000596900 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
SPTBN4-210ENST00000596900 MACF1Q9UPN3 7388 aaKnown RBP8.4□□□□□ -1.06
SPTBN4-210ENST00000596900 MT1EP04732 61 aa8.34□□□□□ -1.07
SPTBN4-210ENST00000596900 SPRR2FQ96RM1 72 aa8.23□□□□□ -1.09
SPTBN4-210ENST00000596900 KRTAP19-4Q3LI73 84 aa8.19□□□□□ -1.1
SPTBN4-210ENST00000596900 MT1LQ93083 61 aa8.17□□□□□ -1.1
SPTBN4-210ENST00000596900 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.17□□□□□ -1.1
SPTBN4-210ENST00000596900 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
SPTBN4-210ENST00000596900 SYNE2Q8WXH0 6885 aaKnown RBP8.11□□□□□ -1.11
SPTBN4-210ENST00000596900 LCE3CQ5T5A8 94 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms