RNA–Protein interactions for RNA: ENST00000595358.5

CCDC61-204, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC61, Length 1,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-204ENST00000595358 SPTSSBQ8NFR3 76 aa12.67□□□□□ -0.38
CCDC61-204ENST00000595358 PSPHP1O15172 72 aa12.6□□□□□ -0.39
CCDC61-204ENST00000595358 S4R3F8 94 aa12.6□□□□□ -0.39
CCDC61-204ENST00000595358 LCA10Q71F78 164 aa12.59□□□□□ -0.39
CCDC61-204ENST00000595358 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
CCDC61-204ENST00000595358 PRR15LQ9BU68 103 aa12.56□□□□□ -0.4
CCDC61-204ENST00000595358 Q5VV11 94 aa12.5□□□□□ -0.41
CCDC61-204ENST00000595358 KRTAP19-2Q3LHN2 52 aa12.48□□□□□ -0.41
CCDC61-204ENST00000595358 UBR4Q5T4S7 5183 aa12.48□□□□□ -0.41
CCDC61-204ENST00000595358 MUC2Q02817 5179 aa12.47□□□□□ -0.41
CCDC61-204ENST00000595358 A0A1B0GU69 56 aa12.45□□□□□ -0.42
CCDC61-204ENST00000595358 SEC61GP60059 68 aa12.34□□□□□ -0.43
CCDC61-204ENST00000595358 CSAG1Q6PB30 78 aa12.31□□□□□ -0.44
CCDC61-204ENST00000595358 RNF213Q63HN8 5207 aa12.3□□□□□ -0.44
CCDC61-204ENST00000595358 A6NED7 52 aa12.2□□□□□ -0.46
CCDC61-204ENST00000595358 FLGP20930 4061 aaPredicted RBP12.19□□□□□ -0.46
CCDC61-204ENST00000595358 LCE2CQ5TA81 110 aa12.15□□□□□ -0.46
CCDC61-204ENST00000595358 KRTAP3-2Q9BYR7 98 aa12.14□□□□□ -0.47
CCDC61-204ENST00000595358 KRTAP10-6P60371 365 aaPredicted RBP12.13□□□□□ -0.47
CCDC61-204ENST00000595358 BRK1Q8WUW1 75 aa12.12□□□□□ -0.47
CCDC61-204ENST00000595358 UQCR11O14957 56 aa12.09□□□□□ -0.47
CCDC61-204ENST00000595358 H0YAA0 97 aa12.07□□□□□ -0.48
CCDC61-204ENST00000595358 A0A1B0GU33 70 aa12.06□□□□□ -0.48
CCDC61-204ENST00000595358 ADM2Q7Z4H4 148 aa12.06□□□□□ -0.48
CCDC61-204ENST00000595358 P0C880 135 aa12.01□□□□□ -0.49
CCDC61-204ENST00000595358 CDC42SE1Q9NRR8 79 aa12.01□□□□□ -0.49
CCDC61-204ENST00000595358 A8MU10 97 aa11.98□□□□□ -0.49
CCDC61-204ENST00000595358 SPATA8Q6RVD6 105 aa11.97□□□□□ -0.49
CCDC61-204ENST00000595358 MIR22HGQ0VDD5 57 aa11.96□□□□□ -0.49
CCDC61-204ENST00000595358 FAT4Q6V0I7 4981 aa11.95□□□□□ -0.5
CCDC61-204ENST00000595358 PRO0628Q9UI54 55 aa11.9□□□□□ -0.5
CCDC61-204ENST00000595358 MT1HP80294 61 aa11.88□□□□□ -0.51
CCDC61-204ENST00000595358 KRTAP13-4Q3LI77 160 aa11.81□□□□□ -0.52
CCDC61-204ENST00000595358 M0R2T5 61 aa11.75□□□□□ -0.53
CCDC61-204ENST00000595358 M0QZ58 72 aa11.71□□□□□ -0.54
CCDC61-204ENST00000595358 LORP23490 312 aaPredicted RBP11.66□□□□□ -0.54
CCDC61-204ENST00000595358 R4GN34 69 aa11.62□□□□□ -0.55
CCDC61-204ENST00000595358 A0A0D9SG42 100 aa11.56□□□□□ -0.56
CCDC61-204ENST00000595358 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
CCDC61-204ENST00000595358 KRTAP9-8Q9BYQ0 159 aa11.48□□□□□ -0.57
CCDC61-204ENST00000595358 PMAIP1Q13794 54 aa11.47□□□□□ -0.57
CCDC61-204ENST00000595358 LCE2AQ5TA79 106 aaPredicted RBP11.45□□□□□ -0.58
CCDC61-204ENST00000595358 MT2AP02795 61 aa11.43□□□□□ -0.58
CCDC61-204ENST00000595358 A6NN06 94 aa11.41□□□□□ -0.58
CCDC61-204ENST00000595358 LINC01554Q52M75 96 aa11.39□□□□□ -0.59
CCDC61-204ENST00000595358 K7ERS5 55 aa11.39□□□□□ -0.59
CCDC61-204ENST00000595358 MT1FP04733 61 aa11.37□□□□□ -0.59
CCDC61-204ENST00000595358 KRTAP12-1P59990 96 aa11.35□□□□□ -0.59
CCDC61-204ENST00000595358 KRTAP12-2P59991 146 aa11.33□□□□□ -0.6
CCDC61-204ENST00000595358 KRTAP10-10P60014 251 aa11.33□□□□□ -0.6
CCDC61-204ENST00000595358 SPINT4Q6UDR6 99 aa11.28□□□□□ -0.6
CCDC61-204ENST00000595358 SPRR2GQ9BYE4 73 aa11.26□□□□□ -0.61
CCDC61-204ENST00000595358 KRTAP19-1Q8IUB9 90 aa11.22□□□□□ -0.61
CCDC61-204ENST00000595358 KRTAP9-3Q9BYQ3 159 aa11.06□□□□□ -0.64
CCDC61-204ENST00000595358 KTN1-AS1Q86SY8 53 aa11.01□□□□□ -0.65
CCDC61-204ENST00000595358 ROMO1P60602 79 aa10.95□□□□□ -0.66
CCDC61-204ENST00000595358 KRTAP19-8Q3LI54 63 aa10.95□□□□□ -0.66
CCDC61-204ENST00000595358 PLAC4Q8WY50 150 aa10.88□□□□□ -0.67
CCDC61-204ENST00000595358 CAMK2N1Q7Z7J9 78 aa10.87□□□□□ -0.67
CCDC61-204ENST00000595358 MT1BP07438 61 aa10.79□□□□□ -0.68
CCDC61-204ENST00000595358 C10orf95Q9H7T3 257 aa10.74□□□□□ -0.69
CCDC61-204ENST00000595358 LCE2BO14633 110 aa10.73□□□□□ -0.69
CCDC61-204ENST00000595358 PRAC1Q96KF2 57 aa10.73□□□□□ -0.69
CCDC61-204ENST00000595358 KRTAP25-1Q3LHN0 102 aa10.49□□□□□ -0.73
CCDC61-204ENST00000595358 MT1XP80297 61 aa10.47□□□□□ -0.73
CCDC61-204ENST00000595358 KRTAP10-5P60370 271 aa10.45□□□□□ -0.74
CCDC61-204ENST00000595358 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
CCDC61-204ENST00000595358 USH2AO75445 5202 aa10.42□□□□□ -0.74
CCDC61-204ENST00000595358 TNP1P09430 55 aa10.37□□□□□ -0.75
CCDC61-204ENST00000595358 PRO2289Q9P1D8 64 aa10.32□□□□□ -0.76
CCDC61-204ENST00000595358 FSIP2Q5CZC0 6907 aa10.24□□□□□ -0.77
CCDC61-204ENST00000595358 KRTAP9-2Q9BYQ4 174 aa10.23□□□□□ -0.77
CCDC61-204ENST00000595358 SSPOA2VEC9 5147 aa10.15□□□□□ -0.79
CCDC61-204ENST00000595358 PP632Q6XCG6 107 aa10.12□□□□□ -0.79
CCDC61-204ENST00000595358 KRTAP23-1A1A580 65 aa10.11□□□□□ -0.79
CCDC61-204ENST00000595358 KRTAP10-7P60409 375 aaPredicted RBP10.05□□□□□ -0.8
CCDC61-204ENST00000595358 KRTAP19-6Q3LI70 58 aa10.05□□□□□ -0.8
CCDC61-204ENST00000595358 KRTAP10-12P60413 245 aa9.94□□□□□ -0.82
CCDC61-204ENST00000595358 LCE3AQ5TA76 89 aa9.93□□□□□ -0.82
CCDC61-204ENST00000595358 CRCT1Q9UGL9 99 aa9.8□□□□□ -0.84
CCDC61-204ENST00000595358 FCGBPQ9Y6R7 5405 aaPredicted RBP9.76□□□□□ -0.85
CCDC61-204ENST00000595358 KRTAP8-1Q8IUC2 63 aa9.75□□□□□ -0.85
CCDC61-204ENST00000595358 KRTAP4-8A0A0G2JLE6 195 aa9.63□□□□□ -0.87
CCDC61-204ENST00000595358 KRTAP4-8Q9BYQ9 185 aa9.63□□□□□ -0.87
CCDC61-204ENST00000595358 KMT2DO14686 5537 aa9.62□□□□□ -0.87
CCDC61-204ENST00000595358 KRTAP12-3P60328 96 aa9.54□□□□□ -0.88
CCDC61-204ENST00000595358 KRTAP9-6A0A140TA67 174 aa9.5□□□□□ -0.89
CCDC61-204ENST00000595358 KRTAP19-5Q3LI72 72 aa9.47□□□□□ -0.89
CCDC61-204ENST00000595358 KRTAP15-1Q3LI76 137 aa9.37□□□□□ -0.91
CCDC61-204ENST00000595358 KRTAP19-7Q3SYF9 63 aa9.34□□□□□ -0.91
CCDC61-204ENST00000595358 MACF1Q9UPN3 7388 aaKnown RBP9.3□□□□□ -0.92
CCDC61-204ENST00000595358 MT1EP04732 61 aa9.16□□□□□ -0.94
CCDC61-204ENST00000595358 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.1□□□□□ -0.95
CCDC61-204ENST00000595358 H3BS24 57 aa9.09□□□□□ -0.95
CCDC61-204ENST00000595358 SYNE2Q8WXH0 6885 aaKnown RBP9.06□□□□□ -0.96
CCDC61-204ENST00000595358 SPRR5A0A1B0GTR4 108 aa9.03□□□□□ -0.96
CCDC61-204ENST00000595358 MT1LQ93083 61 aa8.99□□□□□ -0.97
CCDC61-204ENST00000595358 KRTAP19-4Q3LI73 84 aa8.92□□□□□ -0.98
CCDC61-204ENST00000595358 LCE3CQ5T5A8 94 aa8.92□□□□□ -0.98
CCDC61-204ENST00000595358 SPRR2FQ96RM1 72 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms