RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 A8MUN3 132 aa4.67□□□□□ -1.66
DDX39A-220ENST00000593008 CCDC179H3BU77 68 aa4.67□□□□□ -1.66
DDX39A-220ENST00000593008 LCA10Q71F78 164 aa4.64□□□□□ -1.67
DDX39A-220ENST00000593008 MT2AP02795 61 aa4.63□□□□□ -1.67
DDX39A-220ENST00000593008 S4R3F8 94 aa4.63□□□□□ -1.67
DDX39A-220ENST00000593008 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
DDX39A-220ENST00000593008 MT1FP04733 61 aa4.61□□□□□ -1.67
DDX39A-220ENST00000593008 CSAG1Q6PB30 78 aa4.61□□□□□ -1.67
DDX39A-220ENST00000593008 DMAC1Q96GE9 116 aa4.61□□□□□ -1.67
DDX39A-220ENST00000593008 H7BZZ5 65 aa4.59□□□□□ -1.67
DDX39A-220ENST00000593008 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
DDX39A-220ENST00000593008 NDUFC1O43677 76 aa4.58□□□□□ -1.68
DDX39A-220ENST00000593008 ACYP2P14621 99 aa4.56□□□□□ -1.68
DDX39A-220ENST00000593008 SPTSSBQ8NFR3 76 aa4.55□□□□□ -1.68
DDX39A-220ENST00000593008 USH2AO75445 5202 aa4.55□□□□□ -1.68
DDX39A-220ENST00000593008 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
DDX39A-220ENST00000593008 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
DDX39A-220ENST00000593008 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
DDX39A-220ENST00000593008 LCE2BO14633 110 aa4.52□□□□□ -1.69
DDX39A-220ENST00000593008 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
DDX39A-220ENST00000593008 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
DDX39A-220ENST00000593008 CHKB-CPT1BH3BT56 60 aa4.48□□□□□ -1.69
DDX39A-220ENST00000593008 COA5Q86WW8 74 aa4.48□□□□□ -1.69
DDX39A-220ENST00000593008 PCP4P48539 62 aa4.44□□□□□ -1.7
DDX39A-220ENST00000593008 H0YAA0 97 aa4.43□□□□□ -1.7
DDX39A-220ENST00000593008 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
DDX39A-220ENST00000593008 CRIPTQ9P021 101 aa4.43□□□□□ -1.7
DDX39A-220ENST00000593008 ADM2Q7Z4H4 148 aa4.41□□□□□ -1.7
DDX39A-220ENST00000593008 TMEM258P61165 79 aa4.4□□□□□ -1.71
DDX39A-220ENST00000593008 KRTAP3-2Q9BYR7 98 aa4.4□□□□□ -1.71
DDX39A-220ENST00000593008 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.71
DDX39A-220ENST00000593008 P0C880 135 aa4.39□□□□□ -1.71
DDX39A-220ENST00000593008 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
DDX39A-220ENST00000593008 SEC61GP60059 68 aa4.36□□□□□ -1.71
DDX39A-220ENST00000593008 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
DDX39A-220ENST00000593008 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
DDX39A-220ENST00000593008 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
DDX39A-220ENST00000593008 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
DDX39A-220ENST00000593008 R4GN34 69 aa4.28□□□□□ -1.72
DDX39A-220ENST00000593008 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
DDX39A-220ENST00000593008 MT1BP07438 61 aa4.26□□□□□ -1.73
DDX39A-220ENST00000593008 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
DDX39A-220ENST00000593008 M0QZ58 72 aa4.25□□□□□ -1.73
DDX39A-220ENST00000593008 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
DDX39A-220ENST00000593008 Q5VV11 94 aa4.23□□□□□ -1.73
DDX39A-220ENST00000593008 LINC01554Q52M75 96 aa4.21□□□□□ -1.74
DDX39A-220ENST00000593008 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
DDX39A-220ENST00000593008 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
DDX39A-220ENST00000593008 A0A1B0GU69 56 aa4.18□□□□□ -1.74
DDX39A-220ENST00000593008 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
DDX39A-220ENST00000593008 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
DDX39A-220ENST00000593008 A6NN06 94 aa4.17□□□□□ -1.74
DDX39A-220ENST00000593008 SPATA8Q6RVD6 105 aa4.17□□□□□ -1.74
DDX39A-220ENST00000593008 A0A1B0GU33 70 aa4.14□□□□□ -1.75
DDX39A-220ENST00000593008 V9GYY9 64 aa4.14□□□□□ -1.75
DDX39A-220ENST00000593008 A0A0D9SG42 100 aa4.12□□□□□ -1.75
DDX39A-220ENST00000593008 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
DDX39A-220ENST00000593008 A8MU10 97 aa4.11□□□□□ -1.75
DDX39A-220ENST00000593008 PSPHP1O15172 72 aa4.11□□□□□ -1.75
DDX39A-220ENST00000593008 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
DDX39A-220ENST00000593008 SMIM26A0A096LP01 95 aa4.1□□□□□ -1.75
DDX39A-220ENST00000593008 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
DDX39A-220ENST00000593008 Q1T7F1 81 aa4.08□□□□□ -1.76
DDX39A-220ENST00000593008 MT1XP80297 61 aa4.05□□□□□ -1.76
DDX39A-220ENST00000593008 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
DDX39A-220ENST00000593008 UQCR11O14957 56 aa4.02□□□□□ -1.77
DDX39A-220ENST00000593008 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
DDX39A-220ENST00000593008 NEBP20929 6669 aa4.01□□□□□ -1.77
DDX39A-220ENST00000593008 KMT2DO14686 5537 aa4.01□□□□□ -1.77
DDX39A-220ENST00000593008 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
DDX39A-220ENST00000593008 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
DDX39A-220ENST00000593008 CAMK2N1Q7Z7J9 78 aa3.99□□□□□ -1.77
DDX39A-220ENST00000593008 K7ERS5 55 aa3.96□□□□□ -1.78
DDX39A-220ENST00000593008 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
DDX39A-220ENST00000593008 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
DDX39A-220ENST00000593008 A6NED7 52 aa3.93□□□□□ -1.78
DDX39A-220ENST00000593008 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
DDX39A-220ENST00000593008 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
DDX39A-220ENST00000593008 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
DDX39A-220ENST00000593008 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
DDX39A-220ENST00000593008 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
DDX39A-220ENST00000593008 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
DDX39A-220ENST00000593008 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
DDX39A-220ENST00000593008 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
DDX39A-220ENST00000593008 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
DDX39A-220ENST00000593008 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
DDX39A-220ENST00000593008 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
DDX39A-220ENST00000593008 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
DDX39A-220ENST00000593008 SPRR2EP22531 72 aa3.77□□□□□ -1.81
DDX39A-220ENST00000593008 SPRR2BP35325 72 aa3.77□□□□□ -1.81
DDX39A-220ENST00000593008 SPRR2AP35326 72 aa3.77□□□□□ -1.81
DDX39A-220ENST00000593008 TNP1P09430 55 aa3.76□□□□□ -1.81
DDX39A-220ENST00000593008 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
DDX39A-220ENST00000593008 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
DDX39A-220ENST00000593008 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
DDX39A-220ENST00000593008 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
DDX39A-220ENST00000593008 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
DDX39A-220ENST00000593008 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
DDX39A-220ENST00000593008 SPRR2DP22532 72 aa3.65□□□□□ -1.83
DDX39A-220ENST00000593008 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms