RNA–Protein interactions for RNA: ENST00000592555.1

SAFB-213, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 1,360 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-213ENST00000592555 LCA10Q71F78 164 aa8.89□□□□□ -0.99
SAFB-213ENST00000592555 H7BZZ5 65 aa8.87□□□□□ -0.99
SAFB-213ENST00000592555 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
SAFB-213ENST00000592555 CCDC179H3BU77 68 aa8.86□□□□□ -0.99
SAFB-213ENST00000592555 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
SAFB-213ENST00000592555 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
SAFB-213ENST00000592555 CYSTM1Q9H1C7 97 aa8.79□□□□□ -1
SAFB-213ENST00000592555 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
SAFB-213ENST00000592555 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
SAFB-213ENST00000592555 CHKB-CPT1BH3BT56 60 aa8.73□□□□□ -1.01
SAFB-213ENST00000592555 ATP5EP56381 51 aaPredicted RBP8.73□□□□□ -1.01
SAFB-213ENST00000592555 H0YAA0 97 aa8.67□□□□□ -1.02
SAFB-213ENST00000592555 MT2AP02795 61 aa8.67□□□□□ -1.02
SAFB-213ENST00000592555 TMEM258P61165 79 aa8.67□□□□□ -1.02
SAFB-213ENST00000592555 COA5Q86WW8 74 aa8.63□□□□□ -1.03
SAFB-213ENST00000592555 KRTAP10-10P60014 251 aa8.62□□□□□ -1.03
SAFB-213ENST00000592555 MT1FP04733 61 aa8.59□□□□□ -1.03
SAFB-213ENST00000592555 PCP4P48539 62 aa8.59□□□□□ -1.03
SAFB-213ENST00000592555 LCE2DQ5TA82 110 aaPredicted RBP8.55□□□□□ -1.04
SAFB-213ENST00000592555 CRIPTQ9P021 101 aa8.5□□□□□ -1.05
SAFB-213ENST00000592555 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
SAFB-213ENST00000592555 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.06
SAFB-213ENST00000592555 SERP1Q9Y6X1 66 aa8.39□□□□□ -1.07
SAFB-213ENST00000592555 SEC61GP60059 68 aa8.38□□□□□ -1.07
SAFB-213ENST00000592555 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
SAFB-213ENST00000592555 CRCT1Q9UGL9 99 aa8.37□□□□□ -1.07
SAFB-213ENST00000592555 P0C880 135 aa8.34□□□□□ -1.07
SAFB-213ENST00000592555 SPRR2GQ9BYE4 73 aa8.34□□□□□ -1.07
SAFB-213ENST00000592555 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
SAFB-213ENST00000592555 FSIP2Q5CZC0 6907 aa8.28□□□□□ -1.08
SAFB-213ENST00000592555 R4GN34 69 aa8.28□□□□□ -1.08
SAFB-213ENST00000592555 LCE2BO14633 110 aa8.25□□□□□ -1.09
SAFB-213ENST00000592555 M0QZ58 72 aa8.23□□□□□ -1.09
SAFB-213ENST00000592555 A0A1B0GU69 56 aa8.22□□□□□ -1.09
SAFB-213ENST00000592555 RPS28P62857 69 aaKnown RBP8.21□□□□□ -1.1
SAFB-213ENST00000592555 PRR15LQ9BU68 103 aa8.21□□□□□ -1.1
SAFB-213ENST00000592555 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
SAFB-213ENST00000592555 KRTAP19-8Q3LI54 63 aa8.19□□□□□ -1.1
SAFB-213ENST00000592555 V9GYY9 64 aa8.16□□□□□ -1.1
SAFB-213ENST00000592555 Q5VV11 94 aa8.15□□□□□ -1.1
SAFB-213ENST00000592555 A0A1B0GU33 70 aa8.12□□□□□ -1.11
SAFB-213ENST00000592555 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
SAFB-213ENST00000592555 Q1T7F1 81 aa8.07□□□□□ -1.12
SAFB-213ENST00000592555 MT1BP07438 61 aa8.04□□□□□ -1.12
SAFB-213ENST00000592555 USH2AO75445 5202 aa8.02□□□□□ -1.13
SAFB-213ENST00000592555 A6NN06 94 aa8.01□□□□□ -1.13
SAFB-213ENST00000592555 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
SAFB-213ENST00000592555 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
SAFB-213ENST00000592555 KRTAP13-4Q3LI77 160 aa7.97□□□□□ -1.13
SAFB-213ENST00000592555 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
SAFB-213ENST00000592555 UQCR11O14957 56 aa7.92□□□□□ -1.14
SAFB-213ENST00000592555 SPATA8Q6RVD6 105 aa7.92□□□□□ -1.14
SAFB-213ENST00000592555 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
SAFB-213ENST00000592555 PSPHP1O15172 72 aa7.86□□□□□ -1.15
SAFB-213ENST00000592555 A0A0D9SG42 100 aa7.83□□□□□ -1.16
SAFB-213ENST00000592555 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
SAFB-213ENST00000592555 SSPOA2VEC9 5147 aa7.81□□□□□ -1.16
SAFB-213ENST00000592555 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.8□□□□□ -1.16
SAFB-213ENST00000592555 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
SAFB-213ENST00000592555 MIR22HGQ0VDD5 57 aa7.76□□□□□ -1.17
SAFB-213ENST00000592555 A8MU10 97 aa7.71□□□□□ -1.17
SAFB-213ENST00000592555 KRTAP12-1P59990 96 aa7.71□□□□□ -1.17
SAFB-213ENST00000592555 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.17
SAFB-213ENST00000592555 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
SAFB-213ENST00000592555 A6NED7 52 aa7.69□□□□□ -1.18
SAFB-213ENST00000592555 MT1XP80297 61 aa7.68□□□□□ -1.18
SAFB-213ENST00000592555 KRTAP12-2P59991 146 aa7.64□□□□□ -1.19
SAFB-213ENST00000592555 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
SAFB-213ENST00000592555 K7ERS5 55 aa7.59□□□□□ -1.19
SAFB-213ENST00000592555 CDC42SE1Q9NRR8 79 aa7.5□□□□□ -1.21
SAFB-213ENST00000592555 MACF1Q9UPN3 7388 aaKnown RBP7.35□□□□□ -1.23
SAFB-213ENST00000592555 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
SAFB-213ENST00000592555 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
SAFB-213ENST00000592555 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
SAFB-213ENST00000592555 SYNE2Q8WXH0 6885 aaKnown RBP7.29□□□□□ -1.24
SAFB-213ENST00000592555 TNP1P09430 55 aa7.27□□□□□ -1.25
SAFB-213ENST00000592555 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.25
SAFB-213ENST00000592555 BRK1Q8WUW1 75 aa7.21□□□□□ -1.25
SAFB-213ENST00000592555 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
SAFB-213ENST00000592555 KRTAP8-1Q8IUC2 63 aa7.17□□□□□ -1.26
SAFB-213ENST00000592555 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
SAFB-213ENST00000592555 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
SAFB-213ENST00000592555 ROMO1P60602 79 aa7.11□□□□□ -1.27
SAFB-213ENST00000592555 KRTAP5-9P26371 169 aa7.1□□□□□ -1.27
SAFB-213ENST00000592555 KMT2DO14686 5537 aa7□□□□□ -1.29
SAFB-213ENST00000592555 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
SAFB-213ENST00000592555 SPRR2FQ96RM1 72 aa6.97□□□□□ -1.29
SAFB-213ENST00000592555 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
SAFB-213ENST00000592555 NEBP20929 6669 aa6.92□□□□□ -1.3
SAFB-213ENST00000592555 PRO0628Q9UI54 55 aa6.87□□□□□ -1.31
SAFB-213ENST00000592555 KRTAP20-1Q3LI63 56 aa6.86□□□□□ -1.31
SAFB-213ENST00000592555 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
SAFB-213ENST00000592555 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
SAFB-213ENST00000592555 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
SAFB-213ENST00000592555 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
SAFB-213ENST00000592555 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
SAFB-213ENST00000592555 MT1EP04732 61 aa6.78□□□□□ -1.32
SAFB-213ENST00000592555 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
SAFB-213ENST00000592555 SPRR2EP22531 72 aa6.75□□□□□ -1.33
SAFB-213ENST00000592555 SPRR2BP35325 72 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms