RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 TMEM258P61165 79 aa7.57□□□□□ -1.2
DDX39A-216ENST00000591275 ZCCHC13Q8WW36 166 aaKnown RBP7.56□□□□□ -1.2
DDX39A-216ENST00000591275 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
DDX39A-216ENST00000591275 MP68P56378 58 aa7.54□□□□□ -1.2
DDX39A-216ENST00000591275 H7BZZ5 65 aa7.52□□□□□ -1.21
DDX39A-216ENST00000591275 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
DDX39A-216ENST00000591275 ATP5EP56381 51 aaPredicted RBP7.48□□□□□ -1.21
DDX39A-216ENST00000591275 RPS28P62857 69 aaKnown RBP7.48□□□□□ -1.21
DDX39A-216ENST00000591275 SNURFQ9Y675 71 aa7.48□□□□□ -1.21
DDX39A-216ENST00000591275 TRAV22A0A0B4J277 110 aa7.46□□□□□ -1.22
DDX39A-216ENST00000591275 H0Y9P7 68 aa7.44□□□□□ -1.22
DDX39A-216ENST00000591275 KRTAP20-1Q3LI63 56 aa7.42□□□□□ -1.22
DDX39A-216ENST00000591275 LINC00208Q96KT6 92 aa7.41□□□□□ -1.22
DDX39A-216ENST00000591275 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
DDX39A-216ENST00000591275 NDUFS5O43920 106 aa7.4□□□□□ -1.22
DDX39A-216ENST00000591275 C1orf64Q8NEQ6 169 aa7.4□□□□□ -1.22
DDX39A-216ENST00000591275 SPANXA2-OT1Q8N9U9 137 aa7.38□□□□□ -1.23
DDX39A-216ENST00000591275 LOC101927531A0A1B0GV80 90 aa7.36□□□□□ -1.23
DDX39A-216ENST00000591275 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
DDX39A-216ENST00000591275 A6NN06 94 aa7.34□□□□□ -1.23
DDX39A-216ENST00000591275 CYP4F30PQ9H0H9 118 aa7.34□□□□□ -1.23
DDX39A-216ENST00000591275 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
DDX39A-216ENST00000591275 Q5W150 140 aa7.31□□□□□ -1.24
DDX39A-216ENST00000591275 MT1BP07438 61 aa7.25□□□□□ -1.25
DDX39A-216ENST00000591275 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
DDX39A-216ENST00000591275 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
DDX39A-216ENST00000591275 Q5VV11 94 aa7.2□□□□□ -1.26
DDX39A-216ENST00000591275 KMT2DO14686 5537 aa7.19□□□□□ -1.26
DDX39A-216ENST00000591275 SMIM26A0A096LP01 95 aa7.18□□□□□ -1.26
DDX39A-216ENST00000591275 IGKV2D-30A0A075B6S6 120 aa7.17□□□□□ -1.26
DDX39A-216ENST00000591275 MDN1Q9NU22 5596 aa7.16□□□□□ -1.26
DDX39A-216ENST00000591275 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
DDX39A-216ENST00000591275 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
DDX39A-216ENST00000591275 C7orf65Q6ZTY9 151 aa7.12□□□□□ -1.27
DDX39A-216ENST00000591275 ACYP2P14621 99 aa7.1□□□□□ -1.27
DDX39A-216ENST00000591275 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
DDX39A-216ENST00000591275 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.27
DDX39A-216ENST00000591275 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
DDX39A-216ENST00000591275 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.27
DDX39A-216ENST00000591275 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
DDX39A-216ENST00000591275 A8MUN3 132 aa7.06□□□□□ -1.28
DDX39A-216ENST00000591275 COA5Q86WW8 74 aa7.04□□□□□ -1.28
DDX39A-216ENST00000591275 V9GYY9 64 aa7.04□□□□□ -1.28
DDX39A-216ENST00000591275 Q1T7F1 81 aa7.03□□□□□ -1.28
DDX39A-216ENST00000591275 S4R3F8 94 aa6.99□□□□□ -1.29
DDX39A-216ENST00000591275 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
DDX39A-216ENST00000591275 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
DDX39A-216ENST00000591275 SPRR2EP22531 72 aa6.94□□□□□ -1.3
DDX39A-216ENST00000591275 SPRR2BP35325 72 aa6.94□□□□□ -1.3
DDX39A-216ENST00000591275 SPRR2AP35326 72 aa6.94□□□□□ -1.3
DDX39A-216ENST00000591275 LCA10Q71F78 164 aa6.94□□□□□ -1.3
DDX39A-216ENST00000591275 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
DDX39A-216ENST00000591275 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
DDX39A-216ENST00000591275 LINC01558Q9Y6Z2 57 aa6.89□□□□□ -1.31
DDX39A-216ENST00000591275 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
DDX39A-216ENST00000591275 KRTAP2-2Q9BYT5 123 aa6.83□□□□□ -1.32
DDX39A-216ENST00000591275 KRTAP2-1Q9BYU5 128 aa6.83□□□□□ -1.32
DDX39A-216ENST00000591275 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
DDX39A-216ENST00000591275 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
DDX39A-216ENST00000591275 LCE1AQ5T7P2 110 aa6.77□□□□□ -1.33
DDX39A-216ENST00000591275 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
DDX39A-216ENST00000591275 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
DDX39A-216ENST00000591275 PSPHP1O15172 72 aa6.73□□□□□ -1.33
DDX39A-216ENST00000591275 SPRR2DP22532 72 aa6.71□□□□□ -1.34
DDX39A-216ENST00000591275 MT1XP80297 61 aa6.69□□□□□ -1.34
DDX39A-216ENST00000591275 PRO2289Q9P1D8 64 aa6.69□□□□□ -1.34
DDX39A-216ENST00000591275 A0A1B0GU69 56 aa6.68□□□□□ -1.34
DDX39A-216ENST00000591275 SEC61GP60059 68 aa6.66□□□□□ -1.34
DDX39A-216ENST00000591275 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
DDX39A-216ENST00000591275 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
DDX39A-216ENST00000591275 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
DDX39A-216ENST00000591275 A6NED7 52 aa6.57□□□□□ -1.36
DDX39A-216ENST00000591275 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
DDX39A-216ENST00000591275 UQCR11O14957 56 aa6.56□□□□□ -1.36
DDX39A-216ENST00000591275 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
DDX39A-216ENST00000591275 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
DDX39A-216ENST00000591275 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
DDX39A-216ENST00000591275 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
DDX39A-216ENST00000591275 H0YAA0 97 aa6.54□□□□□ -1.36
DDX39A-216ENST00000591275 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
DDX39A-216ENST00000591275 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
DDX39A-216ENST00000591275 A0A1B0GU33 70 aa6.46□□□□□ -1.38
DDX39A-216ENST00000591275 GPR98Q8WXG9 6306 aa6.46□□□□□ -1.38
DDX39A-216ENST00000591275 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
DDX39A-216ENST00000591275 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
DDX39A-216ENST00000591275 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
DDX39A-216ENST00000591275 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
DDX39A-216ENST00000591275 R4GN34 69 aa6.39□□□□□ -1.39
DDX39A-216ENST00000591275 A8MU10 97 aa6.33□□□□□ -1.4
DDX39A-216ENST00000591275 M0QZ58 72 aa6.33□□□□□ -1.4
DDX39A-216ENST00000591275 P0C880 135 aa6.32□□□□□ -1.4
DDX39A-216ENST00000591275 KRTAP10-12P60413 245 aa6.32□□□□□ -1.4
DDX39A-216ENST00000591275 DSTQ03001 7570 aaKnown RBP6.31□□□□□ -1.4
DDX39A-216ENST00000591275 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
DDX39A-216ENST00000591275 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
DDX39A-216ENST00000591275 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
DDX39A-216ENST00000591275 K7ERS5 55 aa6.2□□□□□ -1.42
DDX39A-216ENST00000591275 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
DDX39A-216ENST00000591275 KTN1-AS1Q86SY8 53 aa6.07□□□□□ -1.44
DDX39A-216ENST00000591275 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms