RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
VAT1-208ENST00000590924 FCGBPQ9Y6R7 5405 aaPredicted RBP8.73□□□□□ -1.01
VAT1-208ENST00000590924 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.02
VAT1-208ENST00000590924 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
VAT1-208ENST00000590924 KLKP1Q107X0 134 aa8.61□□□□□ -1.03
VAT1-208ENST00000590924 SERP2Q8N6R1 65 aa8.57□□□□□ -1.04
VAT1-208ENST00000590924 MACF1Q9UPN3 7388 aaKnown RBP8.56□□□□□ -1.04
VAT1-208ENST00000590924 A8MUN3 132 aa8.56□□□□□ -1.04
VAT1-208ENST00000590924 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
VAT1-208ENST00000590924 S4R3F8 94 aa8.53□□□□□ -1.04
VAT1-208ENST00000590924 LCA10Q71F78 164 aa8.46□□□□□ -1.06
VAT1-208ENST00000590924 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
VAT1-208ENST00000590924 SYNE2Q8WXH0 6885 aaKnown RBP8.45□□□□□ -1.06
VAT1-208ENST00000590924 C20orf197Q8N268 126 aa8.44□□□□□ -1.06
VAT1-208ENST00000590924 COX7CP15954 63 aa8.43□□□□□ -1.06
VAT1-208ENST00000590924 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
VAT1-208ENST00000590924 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
VAT1-208ENST00000590924 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
VAT1-208ENST00000590924 NDUFC1O43677 76 aa8.36□□□□□ -1.07
VAT1-208ENST00000590924 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
VAT1-208ENST00000590924 ACYP2P14621 99 aa8.32□□□□□ -1.08
VAT1-208ENST00000590924 ANAPC13Q9BS18 74 aa8.32□□□□□ -1.08
VAT1-208ENST00000590924 KRTAP6-3Q3LI67 103 aa8.26□□□□□ -1.09
VAT1-208ENST00000590924 H0YAA0 97 aa8.22□□□□□ -1.09
VAT1-208ENST00000590924 H7BZZ5 65 aa8.19□□□□□ -1.1
VAT1-208ENST00000590924 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
VAT1-208ENST00000590924 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
VAT1-208ENST00000590924 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
VAT1-208ENST00000590924 CCDC179H3BU77 68 aa8.12□□□□□ -1.11
VAT1-208ENST00000590924 CRIPTQ9P021 101 aa8.09□□□□□ -1.11
VAT1-208ENST00000590924 MT1BP07438 61 aa8.07□□□□□ -1.12
VAT1-208ENST00000590924 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
VAT1-208ENST00000590924 A6NN06 94 aa8.05□□□□□ -1.12
VAT1-208ENST00000590924 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
VAT1-208ENST00000590924 Q5VV11 94 aa8.04□□□□□ -1.12
VAT1-208ENST00000590924 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
VAT1-208ENST00000590924 COA5Q86WW8 74 aa8.02□□□□□ -1.13
VAT1-208ENST00000590924 NEBP20929 6669 aa7.97□□□□□ -1.13
VAT1-208ENST00000590924 ATP5EP56381 51 aaPredicted RBP7.97□□□□□ -1.13
VAT1-208ENST00000590924 KRTAP3-2Q9BYR7 98 aa7.95□□□□□ -1.14
VAT1-208ENST00000590924 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
VAT1-208ENST00000590924 P0C880 135 aa7.92□□□□□ -1.14
VAT1-208ENST00000590924 TMEM258P61165 79 aa7.89□□□□□ -1.15
VAT1-208ENST00000590924 MUC12Q9UKN1 5478 aa7.89□□□□□ -1.15
VAT1-208ENST00000590924 R4GN34 69 aa7.85□□□□□ -1.15
VAT1-208ENST00000590924 KRTAP5-9P26371 169 aa7.81□□□□□ -1.16
VAT1-208ENST00000590924 M0QZ58 72 aa7.78□□□□□ -1.16
VAT1-208ENST00000590924 SEC61GP60059 68 aa7.78□□□□□ -1.16
VAT1-208ENST00000590924 SERP1Q9Y6X1 66 aa7.75□□□□□ -1.17
VAT1-208ENST00000590924 KRTAP20-1Q3LI63 56 aa7.73□□□□□ -1.17
VAT1-208ENST00000590924 PCP4P48539 62 aa7.67□□□□□ -1.18
VAT1-208ENST00000590924 KMT2DO14686 5537 aa7.66□□□□□ -1.18
VAT1-208ENST00000590924 A0A1B0GU69 56 aa7.62□□□□□ -1.19
VAT1-208ENST00000590924 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
VAT1-208ENST00000590924 LINC01554Q52M75 96 aa7.61□□□□□ -1.19
VAT1-208ENST00000590924 MDN1Q9NU22 5596 aa7.6□□□□□ -1.19
VAT1-208ENST00000590924 A0A1B0GU33 70 aa7.59□□□□□ -1.19
VAT1-208ENST00000590924 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
VAT1-208ENST00000590924 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
VAT1-208ENST00000590924 PRR15LQ9BU68 103 aa7.55□□□□□ -1.2
VAT1-208ENST00000590924 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
VAT1-208ENST00000590924 MT1XP80297 61 aa7.51□□□□□ -1.21
VAT1-208ENST00000590924 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
VAT1-208ENST00000590924 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
VAT1-208ENST00000590924 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
VAT1-208ENST00000590924 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
VAT1-208ENST00000590924 SPRR2EP22531 72 aa7.43□□□□□ -1.22
VAT1-208ENST00000590924 SPRR2BP35325 72 aa7.43□□□□□ -1.22
VAT1-208ENST00000590924 SPRR2AP35326 72 aa7.43□□□□□ -1.22
VAT1-208ENST00000590924 V9GYY9 64 aa7.43□□□□□ -1.22
VAT1-208ENST00000590924 RPS28P62857 69 aaKnown RBP7.42□□□□□ -1.22
VAT1-208ENST00000590924 KRTAP8-1Q8IUC2 63 aa7.4□□□□□ -1.22
VAT1-208ENST00000590924 SMIM26A0A096LP01 95 aa7.39□□□□□ -1.23
VAT1-208ENST00000590924 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
VAT1-208ENST00000590924 Q1T7F1 81 aa7.38□□□□□ -1.23
VAT1-208ENST00000590924 A0A0D9SG42 100 aa7.36□□□□□ -1.23
VAT1-208ENST00000590924 LCE1AQ5T7P2 110 aa7.32□□□□□ -1.24
VAT1-208ENST00000590924 UQCR11O14957 56 aa7.31□□□□□ -1.24
VAT1-208ENST00000590924 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
VAT1-208ENST00000590924 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
VAT1-208ENST00000590924 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
VAT1-208ENST00000590924 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
VAT1-208ENST00000590924 A8MU10 97 aa7.24□□□□□ -1.25
VAT1-208ENST00000590924 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
VAT1-208ENST00000590924 KRTAP2-2Q9BYT5 123 aa7.23□□□□□ -1.25
VAT1-208ENST00000590924 KRTAP2-1Q9BYU5 128 aa7.23□□□□□ -1.25
VAT1-208ENST00000590924 PSPHP1O15172 72 aa7.21□□□□□ -1.26
VAT1-208ENST00000590924 SPRR2DP22532 72 aa7.19□□□□□ -1.26
VAT1-208ENST00000590924 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
VAT1-208ENST00000590924 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.26
VAT1-208ENST00000590924 KRTAP10-12P60413 245 aa7.14□□□□□ -1.27
VAT1-208ENST00000590924 A6NED7 52 aa7.02□□□□□ -1.29
VAT1-208ENST00000590924 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
VAT1-208ENST00000590924 K7ERS5 55 aa6.98□□□□□ -1.29
VAT1-208ENST00000590924 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
VAT1-208ENST00000590924 TNP1P09430 55 aa6.84□□□□□ -1.31
VAT1-208ENST00000590924 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
VAT1-208ENST00000590924 DSTQ03001 7570 aaKnown RBP6.72□□□□□ -1.33
VAT1-208ENST00000590924 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
VAT1-208ENST00000590924 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms