RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 C5orf47Q569G3 176 aa7.54□□□□□ -1.2
NCLN-203ENST00000587740 LINC00208Q96KT6 92 aa7.54□□□□□ -1.2
NCLN-203ENST00000587740 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
NCLN-203ENST00000587740 FAM236AA0A1B0GUQ0 79 aa7.49□□□□□ -1.21
NCLN-203ENST00000587740 FAM236BA0A1B0GV22 79 aa7.49□□□□□ -1.21
NCLN-203ENST00000587740 NEBP20929 6669 aa7.48□□□□□ -1.21
NCLN-203ENST00000587740 H3BPC8 53 aa7.48□□□□□ -1.21
NCLN-203ENST00000587740 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.22
NCLN-203ENST00000587740 S4R3F8 94 aa7.44□□□□□ -1.22
NCLN-203ENST00000587740 KLKP1Q107X0 134 aa7.43□□□□□ -1.22
NCLN-203ENST00000587740 TRAV7A0A075B6U4 112 aa7.42□□□□□ -1.22
NCLN-203ENST00000587740 LCA10Q71F78 164 aa7.38□□□□□ -1.23
NCLN-203ENST00000587740 A8MUN3 132 aa7.35□□□□□ -1.23
NCLN-203ENST00000587740 CSAG1Q6PB30 78 aa7.35□□□□□ -1.23
NCLN-203ENST00000587740 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
NCLN-203ENST00000587740 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
NCLN-203ENST00000587740 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
NCLN-203ENST00000587740 KRTAP20-1Q3LI63 56 aa7.27□□□□□ -1.25
NCLN-203ENST00000587740 NDUFC1O43677 76 aa7.25□□□□□ -1.25
NCLN-203ENST00000587740 SNURFQ9Y675 71 aa7.24□□□□□ -1.25
NCLN-203ENST00000587740 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
NCLN-203ENST00000587740 C20orf197Q8N268 126 aa7.22□□□□□ -1.25
NCLN-203ENST00000587740 ACYP2P14621 99 aa7.15□□□□□ -1.26
NCLN-203ENST00000587740 COX7CP15954 63 aa7.14□□□□□ -1.27
NCLN-203ENST00000587740 A6NN06 94 aa7.13□□□□□ -1.27
NCLN-203ENST00000587740 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
NCLN-203ENST00000587740 H0YAA0 97 aa7.09□□□□□ -1.27
NCLN-203ENST00000587740 KRTAP5-9P26371 169 aa7.09□□□□□ -1.27
NCLN-203ENST00000587740 MDN1Q9NU22 5596 aa7.09□□□□□ -1.27
NCLN-203ENST00000587740 KMT2DO14686 5537 aa7.08□□□□□ -1.28
NCLN-203ENST00000587740 MT1BP07438 61 aa7.08□□□□□ -1.28
NCLN-203ENST00000587740 ANAPC13Q9BS18 74 aa7.05□□□□□ -1.28
NCLN-203ENST00000587740 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
NCLN-203ENST00000587740 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
NCLN-203ENST00000587740 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.29
NCLN-203ENST00000587740 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
NCLN-203ENST00000587740 KRTAP10-5P60370 271 aa6.99□□□□□ -1.29
NCLN-203ENST00000587740 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
NCLN-203ENST00000587740 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
NCLN-203ENST00000587740 Q5VV11 94 aa6.96□□□□□ -1.3
NCLN-203ENST00000587740 H7BZZ5 65 aa6.95□□□□□ -1.3
NCLN-203ENST00000587740 KRTAP2-3P0C7H8 128 aa6.95□□□□□ -1.3
NCLN-203ENST00000587740 KRTAP2-4Q9BYR9 128 aa6.95□□□□□ -1.3
NCLN-203ENST00000587740 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
NCLN-203ENST00000587740 P0C880 135 aa6.89□□□□□ -1.31
NCLN-203ENST00000587740 COA5Q86WW8 74 aa6.89□□□□□ -1.31
NCLN-203ENST00000587740 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
NCLN-203ENST00000587740 KRTAP3-2Q9BYR7 98 aa6.87□□□□□ -1.31
NCLN-203ENST00000587740 R4GN34 69 aa6.85□□□□□ -1.31
NCLN-203ENST00000587740 M0QZ58 72 aa6.8□□□□□ -1.32
NCLN-203ENST00000587740 SPRR2EP22531 72 aa6.76□□□□□ -1.33
NCLN-203ENST00000587740 SPRR2BP35325 72 aa6.76□□□□□ -1.33
NCLN-203ENST00000587740 SPRR2AP35326 72 aa6.76□□□□□ -1.33
NCLN-203ENST00000587740 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
NCLN-203ENST00000587740 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
NCLN-203ENST00000587740 SEC61GP60059 68 aa6.7□□□□□ -1.34
NCLN-203ENST00000587740 KRTAP2-2Q9BYT5 123 aa6.7□□□□□ -1.34
NCLN-203ENST00000587740 KRTAP2-1Q9BYU5 128 aa6.7□□□□□ -1.34
NCLN-203ENST00000587740 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
NCLN-203ENST00000587740 PLAC4Q8WY50 150 aa6.68□□□□□ -1.34
NCLN-203ENST00000587740 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
NCLN-203ENST00000587740 TMEM258P61165 79 aa6.66□□□□□ -1.34
NCLN-203ENST00000587740 LCE1AQ5T7P2 110 aa6.63□□□□□ -1.35
NCLN-203ENST00000587740 A0A1B0GU69 56 aa6.55□□□□□ -1.36
NCLN-203ENST00000587740 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
NCLN-203ENST00000587740 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
NCLN-203ENST00000587740 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
NCLN-203ENST00000587740 A0A1B0GU33 70 aa6.53□□□□□ -1.36
NCLN-203ENST00000587740 SPRR2DP22532 72 aa6.53□□□□□ -1.36
NCLN-203ENST00000587740 MT1XP80297 61 aa6.51□□□□□ -1.37
NCLN-203ENST00000587740 PRR15LQ9BU68 103 aa6.46□□□□□ -1.38
NCLN-203ENST00000587740 SPATA8Q6RVD6 105 aa6.45□□□□□ -1.38
NCLN-203ENST00000587740 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
NCLN-203ENST00000587740 A0A0D9SG42 100 aa6.41□□□□□ -1.38
NCLN-203ENST00000587740 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
NCLN-203ENST00000587740 KRTAP12-2P59991 146 aa6.41□□□□□ -1.38
NCLN-203ENST00000587740 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
NCLN-203ENST00000587740 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
NCLN-203ENST00000587740 GPR98Q8WXG9 6306 aa6.39□□□□□ -1.39
NCLN-203ENST00000587740 PCP4P48539 62 aa6.38□□□□□ -1.39
NCLN-203ENST00000587740 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
NCLN-203ENST00000587740 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
NCLN-203ENST00000587740 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
NCLN-203ENST00000587740 A8MU10 97 aa6.27□□□□□ -1.41
NCLN-203ENST00000587740 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
NCLN-203ENST00000587740 V9GYY9 64 aa6.26□□□□□ -1.41
NCLN-203ENST00000587740 UQCR11O14957 56 aa6.23□□□□□ -1.41
NCLN-203ENST00000587740 KRTAP10-7P60409 375 aaPredicted RBP6.21□□□□□ -1.42
NCLN-203ENST00000587740 Q1T7F1 81 aa6.21□□□□□ -1.42
NCLN-203ENST00000587740 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
NCLN-203ENST00000587740 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
NCLN-203ENST00000587740 PSPHP1O15172 72 aa6.16□□□□□ -1.42
NCLN-203ENST00000587740 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
NCLN-203ENST00000587740 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
NCLN-203ENST00000587740 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
NCLN-203ENST00000587740 A6NED7 52 aa5.98□□□□□ -1.45
NCLN-203ENST00000587740 K7ERS5 55 aa5.97□□□□□ -1.45
NCLN-203ENST00000587740 C10orf95Q9H7T3 257 aa5.97□□□□□ -1.45
NCLN-203ENST00000587740 TNP1P09430 55 aa5.93□□□□□ -1.46
NCLN-203ENST00000587740 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms