RNA–Protein interactions for RNA: ENST00000587600.1

LDLRAD4-210, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-210ENST00000587600 ATP5EP56381 51 aaPredicted RBP6.5□□□□□ -1.37
LDLRAD4-210ENST00000587600 PCP4P48539 62 aa6.48□□□□□ -1.37
LDLRAD4-210ENST00000587600 TMEM258P61165 79 aa6.47□□□□□ -1.37
LDLRAD4-210ENST00000587600 LCA10Q71F78 164 aa6.47□□□□□ -1.37
LDLRAD4-210ENST00000587600 CSAG1Q6PB30 78 aa6.46□□□□□ -1.38
LDLRAD4-210ENST00000587600 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
LDLRAD4-210ENST00000587600 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
LDLRAD4-210ENST00000587600 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
LDLRAD4-210ENST00000587600 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
LDLRAD4-210ENST00000587600 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
LDLRAD4-210ENST00000587600 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
LDLRAD4-210ENST00000587600 COA5Q86WW8 74 aa6.37□□□□□ -1.39
LDLRAD4-210ENST00000587600 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
LDLRAD4-210ENST00000587600 H0YAA0 97 aa6.32□□□□□ -1.4
LDLRAD4-210ENST00000587600 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
LDLRAD4-210ENST00000587600 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
LDLRAD4-210ENST00000587600 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
LDLRAD4-210ENST00000587600 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
LDLRAD4-210ENST00000587600 MT2AP02795 61 aa6.24□□□□□ -1.41
LDLRAD4-210ENST00000587600 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
LDLRAD4-210ENST00000587600 MT1FP04733 61 aa6.18□□□□□ -1.42
LDLRAD4-210ENST00000587600 ADM2Q7Z4H4 148 aa6.18□□□□□ -1.42
LDLRAD4-210ENST00000587600 CRIPTQ9P021 101 aa6.18□□□□□ -1.42
LDLRAD4-210ENST00000587600 SEC61GP60059 68 aa6.16□□□□□ -1.42
LDLRAD4-210ENST00000587600 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
LDLRAD4-210ENST00000587600 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
LDLRAD4-210ENST00000587600 KRTAP9-3Q9BYQ3 159 aa6.08□□□□□ -1.44
LDLRAD4-210ENST00000587600 A0A1B0GU69 56 aa6.07□□□□□ -1.44
LDLRAD4-210ENST00000587600 P0C880 135 aa6.07□□□□□ -1.44
LDLRAD4-210ENST00000587600 V9GYY9 64 aa6.07□□□□□ -1.44
LDLRAD4-210ENST00000587600 SMIM26A0A096LP01 95 aa6.06□□□□□ -1.44
LDLRAD4-210ENST00000587600 PRR15LQ9BU68 103 aa6.06□□□□□ -1.44
LDLRAD4-210ENST00000587600 LINC01558Q9Y6Z2 57 aa6.06□□□□□ -1.44
LDLRAD4-210ENST00000587600 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
LDLRAD4-210ENST00000587600 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
LDLRAD4-210ENST00000587600 R4GN34 69 aa6.03□□□□□ -1.44
LDLRAD4-210ENST00000587600 M0QZ58 72 aa6.02□□□□□ -1.45
LDLRAD4-210ENST00000587600 Q1T7F1 81 aa6□□□□□ -1.45
LDLRAD4-210ENST00000587600 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
LDLRAD4-210ENST00000587600 A0A1B0GU33 70 aa5.97□□□□□ -1.45
LDLRAD4-210ENST00000587600 Q5VV11 94 aa5.95□□□□□ -1.46
LDLRAD4-210ENST00000587600 LCE2BO14633 110 aa5.91□□□□□ -1.46
LDLRAD4-210ENST00000587600 KRTAP19-8Q3LI54 63 aa5.91□□□□□ -1.46
LDLRAD4-210ENST00000587600 UQCR11O14957 56 aa5.86□□□□□ -1.47
LDLRAD4-210ENST00000587600 A6NN06 94 aa5.85□□□□□ -1.47
LDLRAD4-210ENST00000587600 PSPHP1O15172 72 aa5.84□□□□□ -1.47
LDLRAD4-210ENST00000587600 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
LDLRAD4-210ENST00000587600 USH2AO75445 5202 aa5.84□□□□□ -1.48
LDLRAD4-210ENST00000587600 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
LDLRAD4-210ENST00000587600 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
LDLRAD4-210ENST00000587600 MT1BP07438 61 aa5.8□□□□□ -1.48
LDLRAD4-210ENST00000587600 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
LDLRAD4-210ENST00000587600 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
LDLRAD4-210ENST00000587600 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
LDLRAD4-210ENST00000587600 A0A0D9SG42 100 aa5.72□□□□□ -1.49
LDLRAD4-210ENST00000587600 A6NED7 52 aa5.71□□□□□ -1.5
LDLRAD4-210ENST00000587600 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
LDLRAD4-210ENST00000587600 A8MU10 97 aa5.67□□□□□ -1.5
LDLRAD4-210ENST00000587600 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
LDLRAD4-210ENST00000587600 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
LDLRAD4-210ENST00000587600 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
LDLRAD4-210ENST00000587600 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
LDLRAD4-210ENST00000587600 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
LDLRAD4-210ENST00000587600 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
LDLRAD4-210ENST00000587600 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
LDLRAD4-210ENST00000587600 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
LDLRAD4-210ENST00000587600 K7ERS5 55 aa5.6□□□□□ -1.51
LDLRAD4-210ENST00000587600 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
LDLRAD4-210ENST00000587600 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
LDLRAD4-210ENST00000587600 MT1XP80297 61 aa5.55□□□□□ -1.52
LDLRAD4-210ENST00000587600 MACF1Q9UPN3 7388 aaKnown RBP5.48□□□□□ -1.53
LDLRAD4-210ENST00000587600 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
LDLRAD4-210ENST00000587600 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
LDLRAD4-210ENST00000587600 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
LDLRAD4-210ENST00000587600 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
LDLRAD4-210ENST00000587600 TNP1P09430 55 aa5.31□□□□□ -1.56
LDLRAD4-210ENST00000587600 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
LDLRAD4-210ENST00000587600 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
LDLRAD4-210ENST00000587600 ROMO1P60602 79 aa5.26□□□□□ -1.57
LDLRAD4-210ENST00000587600 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
LDLRAD4-210ENST00000587600 PRO0628Q9UI54 55 aa5.2□□□□□ -1.58
LDLRAD4-210ENST00000587600 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
LDLRAD4-210ENST00000587600 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
LDLRAD4-210ENST00000587600 NEBP20929 6669 aa5.13□□□□□ -1.59
LDLRAD4-210ENST00000587600 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
LDLRAD4-210ENST00000587600 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
LDLRAD4-210ENST00000587600 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
LDLRAD4-210ENST00000587600 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
LDLRAD4-210ENST00000587600 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
LDLRAD4-210ENST00000587600 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
LDLRAD4-210ENST00000587600 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
LDLRAD4-210ENST00000587600 KMT2DO14686 5537 aa5.02□□□□□ -1.61
LDLRAD4-210ENST00000587600 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
LDLRAD4-210ENST00000587600 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
LDLRAD4-210ENST00000587600 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
LDLRAD4-210ENST00000587600 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
LDLRAD4-210ENST00000587600 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
LDLRAD4-210ENST00000587600 KRTAP20-1Q3LI63 56 aa4.95□□□□□ -1.62
LDLRAD4-210ENST00000587600 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
LDLRAD4-210ENST00000587600 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms