RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 S4R3F8 94 aa6.63□□□□□ -1.35
VMP1-203ENST00000586245 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
VMP1-203ENST00000586245 TMEM258P61165 79 aa6.59□□□□□ -1.35
VMP1-203ENST00000586245 DMAC1Q96GE9 116 aa6.58□□□□□ -1.36
VMP1-203ENST00000586245 LCA10Q71F78 164 aa6.57□□□□□ -1.36
VMP1-203ENST00000586245 H7BZZ5 65 aa6.56□□□□□ -1.36
VMP1-203ENST00000586245 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
VMP1-203ENST00000586245 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
VMP1-203ENST00000586245 CYSTM1Q9H1C7 97 aa6.54□□□□□ -1.36
VMP1-203ENST00000586245 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
VMP1-203ENST00000586245 ACYP2P14621 99 aa6.52□□□□□ -1.37
VMP1-203ENST00000586245 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
VMP1-203ENST00000586245 MT2AP02795 61 aa6.45□□□□□ -1.38
VMP1-203ENST00000586245 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
VMP1-203ENST00000586245 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
VMP1-203ENST00000586245 MT1FP04733 61 aa6.39□□□□□ -1.39
VMP1-203ENST00000586245 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
VMP1-203ENST00000586245 SERP1Q9Y6X1 66 aa6.38□□□□□ -1.39
VMP1-203ENST00000586245 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
VMP1-203ENST00000586245 COA5Q86WW8 74 aa6.34□□□□□ -1.39
VMP1-203ENST00000586245 H0YAA0 97 aa6.33□□□□□ -1.4
VMP1-203ENST00000586245 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
VMP1-203ENST00000586245 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
VMP1-203ENST00000586245 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
VMP1-203ENST00000586245 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
VMP1-203ENST00000586245 CRIPTQ9P021 101 aa6.2□□□□□ -1.42
VMP1-203ENST00000586245 P0C880 135 aa6.16□□□□□ -1.42
VMP1-203ENST00000586245 V9GYY9 64 aa6.15□□□□□ -1.42
VMP1-203ENST00000586245 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
VMP1-203ENST00000586245 USH2AO75445 5202 aa6.14□□□□□ -1.43
VMP1-203ENST00000586245 SEC61GP60059 68 aa6.13□□□□□ -1.43
VMP1-203ENST00000586245 SPRR2GQ9BYE4 73 aa6.13□□□□□ -1.43
VMP1-203ENST00000586245 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
VMP1-203ENST00000586245 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
VMP1-203ENST00000586245 R4GN34 69 aa6.11□□□□□ -1.43
VMP1-203ENST00000586245 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
VMP1-203ENST00000586245 M0QZ58 72 aa6.07□□□□□ -1.44
VMP1-203ENST00000586245 Q1T7F1 81 aa6.07□□□□□ -1.44
VMP1-203ENST00000586245 Q5VV11 94 aa6.04□□□□□ -1.44
VMP1-203ENST00000586245 A0A1B0GU69 56 aa6.03□□□□□ -1.44
VMP1-203ENST00000586245 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
VMP1-203ENST00000586245 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
VMP1-203ENST00000586245 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
VMP1-203ENST00000586245 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
VMP1-203ENST00000586245 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
VMP1-203ENST00000586245 LINC01554Q52M75 96 aa5.97□□□□□ -1.45
VMP1-203ENST00000586245 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
VMP1-203ENST00000586245 MT1BP07438 61 aa5.96□□□□□ -1.46
VMP1-203ENST00000586245 A0A1B0GU33 70 aa5.95□□□□□ -1.46
VMP1-203ENST00000586245 PSPHP1O15172 72 aa5.93□□□□□ -1.46
VMP1-203ENST00000586245 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
VMP1-203ENST00000586245 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
VMP1-203ENST00000586245 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
VMP1-203ENST00000586245 H3BS24 57 aa5.87□□□□□ -1.47
VMP1-203ENST00000586245 SPATA8Q6RVD6 105 aa5.86□□□□□ -1.47
VMP1-203ENST00000586245 A6NN06 94 aa5.83□□□□□ -1.48
VMP1-203ENST00000586245 A6NED7 52 aa5.82□□□□□ -1.48
VMP1-203ENST00000586245 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
VMP1-203ENST00000586245 A0A0D9SG42 100 aa5.81□□□□□ -1.48
VMP1-203ENST00000586245 UQCR11O14957 56 aa5.8□□□□□ -1.48
VMP1-203ENST00000586245 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
VMP1-203ENST00000586245 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
VMP1-203ENST00000586245 BRK1Q8WUW1 75 aa5.72□□□□□ -1.49
VMP1-203ENST00000586245 A8MU10 97 aa5.71□□□□□ -1.5
VMP1-203ENST00000586245 MIR22HGQ0VDD5 57 aa5.71□□□□□ -1.5
VMP1-203ENST00000586245 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
VMP1-203ENST00000586245 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
VMP1-203ENST00000586245 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
VMP1-203ENST00000586245 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
VMP1-203ENST00000586245 MT1XP80297 61 aa5.68□□□□□ -1.5
VMP1-203ENST00000586245 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
VMP1-203ENST00000586245 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
VMP1-203ENST00000586245 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
VMP1-203ENST00000586245 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
VMP1-203ENST00000586245 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
VMP1-203ENST00000586245 K7ERS5 55 aa5.57□□□□□ -1.52
VMP1-203ENST00000586245 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
VMP1-203ENST00000586245 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
VMP1-203ENST00000586245 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
VMP1-203ENST00000586245 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
VMP1-203ENST00000586245 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
VMP1-203ENST00000586245 KMT2DO14686 5537 aa5.41□□□□□ -1.54
VMP1-203ENST00000586245 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
VMP1-203ENST00000586245 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
VMP1-203ENST00000586245 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
VMP1-203ENST00000586245 KRTAP6-3Q3LI67 103 aa5.35□□□□□ -1.55
VMP1-203ENST00000586245 TNP1P09430 55 aa5.34□□□□□ -1.55
VMP1-203ENST00000586245 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
VMP1-203ENST00000586245 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
VMP1-203ENST00000586245 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
VMP1-203ENST00000586245 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
VMP1-203ENST00000586245 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
VMP1-203ENST00000586245 ROMO1P60602 79 aa5.23□□□□□ -1.57
VMP1-203ENST00000586245 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
VMP1-203ENST00000586245 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.58
VMP1-203ENST00000586245 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
VMP1-203ENST00000586245 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
VMP1-203ENST00000586245 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
VMP1-203ENST00000586245 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
VMP1-203ENST00000586245 MDN1Q9NU22 5596 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 264.2 ms