RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
PRKCSH-202ENST00000585540 SMIM20Q8N5G0 67 aa6.51□□□□□ -1.37
PRKCSH-202ENST00000585540 LCA10Q71F78 164 aa6.49□□□□□ -1.37
PRKCSH-202ENST00000585540 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
PRKCSH-202ENST00000585540 LCE2BO14633 110 aa6.42□□□□□ -1.38
PRKCSH-202ENST00000585540 KRTAP3-3Q9BYR6 98 aa6.42□□□□□ -1.38
PRKCSH-202ENST00000585540 NDUFC1O43677 76 aa6.41□□□□□ -1.38
PRKCSH-202ENST00000585540 SERP2Q8N6R1 65 aa6.4□□□□□ -1.38
PRKCSH-202ENST00000585540 SNURFQ9Y675 71 aa6.4□□□□□ -1.38
PRKCSH-202ENST00000585540 C20orf197Q8N268 126 aa6.37□□□□□ -1.39
PRKCSH-202ENST00000585540 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
PRKCSH-202ENST00000585540 H0YAA0 97 aa6.36□□□□□ -1.39
PRKCSH-202ENST00000585540 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
PRKCSH-202ENST00000585540 COX7CP15954 63 aa6.3□□□□□ -1.4
PRKCSH-202ENST00000585540 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
PRKCSH-202ENST00000585540 USH2AO75445 5202 aa6.28□□□□□ -1.4
PRKCSH-202ENST00000585540 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
PRKCSH-202ENST00000585540 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
PRKCSH-202ENST00000585540 ACYP2P14621 99 aa6.25□□□□□ -1.41
PRKCSH-202ENST00000585540 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
PRKCSH-202ENST00000585540 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
PRKCSH-202ENST00000585540 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
PRKCSH-202ENST00000585540 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
PRKCSH-202ENST00000585540 Q5VV11 94 aa6.21□□□□□ -1.42
PRKCSH-202ENST00000585540 SPTSSBQ8NFR3 76 aa6.21□□□□□ -1.42
PRKCSH-202ENST00000585540 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
PRKCSH-202ENST00000585540 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
PRKCSH-202ENST00000585540 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
PRKCSH-202ENST00000585540 H7BZZ5 65 aa6.15□□□□□ -1.42
PRKCSH-202ENST00000585540 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
PRKCSH-202ENST00000585540 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
PRKCSH-202ENST00000585540 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
PRKCSH-202ENST00000585540 MACF1Q9UPN3 7388 aaKnown RBP6.11□□□□□ -1.43
PRKCSH-202ENST00000585540 MT1BP07438 61 aa6.11□□□□□ -1.43
PRKCSH-202ENST00000585540 P0C880 135 aa6.07□□□□□ -1.44
PRKCSH-202ENST00000585540 COA5Q86WW8 74 aa6.07□□□□□ -1.44
PRKCSH-202ENST00000585540 R4GN34 69 aa6.07□□□□□ -1.44
PRKCSH-202ENST00000585540 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
PRKCSH-202ENST00000585540 A6NN06 94 aa6.04□□□□□ -1.44
PRKCSH-202ENST00000585540 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
PRKCSH-202ENST00000585540 M0QZ58 72 aa5.98□□□□□ -1.45
PRKCSH-202ENST00000585540 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
PRKCSH-202ENST00000585540 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
PRKCSH-202ENST00000585540 ATP5EP56381 51 aaPredicted RBP5.91□□□□□ -1.46
PRKCSH-202ENST00000585540 TMEM258P61165 79 aa5.88□□□□□ -1.47
PRKCSH-202ENST00000585540 SEC61GP60059 68 aa5.86□□□□□ -1.47
PRKCSH-202ENST00000585540 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
PRKCSH-202ENST00000585540 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
PRKCSH-202ENST00000585540 SERP1Q9Y6X1 66 aa5.82□□□□□ -1.48
PRKCSH-202ENST00000585540 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
PRKCSH-202ENST00000585540 NEBP20929 6669 aa5.79□□□□□ -1.48
PRKCSH-202ENST00000585540 MT1XP80297 61 aa5.77□□□□□ -1.49
PRKCSH-202ENST00000585540 A0A1B0GU69 56 aa5.73□□□□□ -1.49
PRKCSH-202ENST00000585540 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
PRKCSH-202ENST00000585540 A0A1B0GU33 70 aa5.7□□□□□ -1.5
PRKCSH-202ENST00000585540 PCP4P48539 62 aa5.68□□□□□ -1.5
PRKCSH-202ENST00000585540 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
PRKCSH-202ENST00000585540 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
PRKCSH-202ENST00000585540 KRTAP5-9P26371 169 aa5.66□□□□□ -1.5
PRKCSH-202ENST00000585540 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
PRKCSH-202ENST00000585540 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.51
PRKCSH-202ENST00000585540 A0A0D9SG42 100 aa5.64□□□□□ -1.51
PRKCSH-202ENST00000585540 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
PRKCSH-202ENST00000585540 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
PRKCSH-202ENST00000585540 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
PRKCSH-202ENST00000585540 A8MU10 97 aa5.54□□□□□ -1.52
PRKCSH-202ENST00000585540 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
PRKCSH-202ENST00000585540 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
PRKCSH-202ENST00000585540 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
PRKCSH-202ENST00000585540 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
PRKCSH-202ENST00000585540 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
PRKCSH-202ENST00000585540 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
PRKCSH-202ENST00000585540 Q1T7F1 81 aa5.46□□□□□ -1.54
PRKCSH-202ENST00000585540 V9GYY9 64 aa5.46□□□□□ -1.54
PRKCSH-202ENST00000585540 UQCR11O14957 56 aa5.45□□□□□ -1.54
PRKCSH-202ENST00000585540 KMT2DO14686 5537 aa5.45□□□□□ -1.54
PRKCSH-202ENST00000585540 PSPHP1O15172 72 aa5.44□□□□□ -1.54
PRKCSH-202ENST00000585540 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
PRKCSH-202ENST00000585540 MDN1Q9NU22 5596 aa5.4□□□□□ -1.54
PRKCSH-202ENST00000585540 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
PRKCSH-202ENST00000585540 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
PRKCSH-202ENST00000585540 KRTAP2-3P0C7H8 128 aa5.37□□□□□ -1.55
PRKCSH-202ENST00000585540 KRTAP2-4Q9BYR9 128 aa5.37□□□□□ -1.55
PRKCSH-202ENST00000585540 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
PRKCSH-202ENST00000585540 SPRR2EP22531 72 aa5.35□□□□□ -1.55
PRKCSH-202ENST00000585540 SPRR2BP35325 72 aa5.35□□□□□ -1.55
PRKCSH-202ENST00000585540 SPRR2AP35326 72 aa5.35□□□□□ -1.55
PRKCSH-202ENST00000585540 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
PRKCSH-202ENST00000585540 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
PRKCSH-202ENST00000585540 A6NED7 52 aa5.26□□□□□ -1.57
PRKCSH-202ENST00000585540 TNP1P09430 55 aa5.24□□□□□ -1.57
PRKCSH-202ENST00000585540 K7ERS5 55 aa5.22□□□□□ -1.57
PRKCSH-202ENST00000585540 SPRR2DP22532 72 aa5.18□□□□□ -1.58
PRKCSH-202ENST00000585540 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
PRKCSH-202ENST00000585540 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
PRKCSH-202ENST00000585540 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
PRKCSH-202ENST00000585540 MT1EP04732 61 aa5.13□□□□□ -1.59
PRKCSH-202ENST00000585540 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
PRKCSH-202ENST00000585540 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
PRKCSH-202ENST00000585540 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms