RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	IGKV2D-30	A0A075B6S6	120 aa		5.04	□□□□□ -1.6
EIF4A1-231	ENST00000584054	CCDC179	H3BU77	68 aa		5.04	□□□□□ -1.6
EIF4A1-231	ENST00000584054	SNURF	Q9Y675	71 aa		5.04	□□□□□ -1.6
EIF4A1-231	ENST00000584054	TMEM258	P61165	79 aa		5.03	□□□□□ -1.6
EIF4A1-231	ENST00000584054	KRTAP4-8	Q9BYQ9	185 aa		5.02	□□□□□ -1.61
EIF4A1-231	ENST00000584054		A8MUN3	132 aa		5.01	□□□□□ -1.61
EIF4A1-231	ENST00000584054		H7BZZ5	65 aa		5	□□□□□ -1.61
EIF4A1-231	ENST00000584054	MT1H	P80294	61 aa		4.99	□□□□□ -1.61
EIF4A1-231	ENST00000584054	RBM12B-AS1	Q9P1G2	102 aa		4.98	□□□□□ -1.61
EIF4A1-231	ENST00000584054	COX6B2	Q6YFQ2	88 aa		4.95	□□□□□ -1.62
EIF4A1-231	ENST00000584054	KRTAP9-2	Q9BYQ4	174 aa		4.95	□□□□□ -1.62
EIF4A1-231	ENST00000584054	FAM236D	A0A1B0GTK5	79 aa		4.94	□□□□□ -1.62
EIF4A1-231	ENST00000584054	FAM236C	P0DP71	79 aa		4.94	□□□□□ -1.62
EIF4A1-231	ENST00000584054	ACYP2	P14621	99 aa		4.93	□□□□□ -1.62
EIF4A1-231	ENST00000584054	DMAC1	Q96GE9	116 aa		4.92	□□□□□ -1.62
EIF4A1-231	ENST00000584054	C4orf26	Q17RF5	130 aa		4.91	□□□□□ -1.62
EIF4A1-231	ENST00000584054	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.9	□□□□□ -1.63
EIF4A1-231	ENST00000584054	H1FX-AS1	Q4G0G2	97 aa		4.9	□□□□□ -1.63
EIF4A1-231	ENST00000584054	CYSTM1	Q9H1C7	97 aa		4.89	□□□□□ -1.63
EIF4A1-231	ENST00000584054	KRTAP9-6	A0A140TA67	174 aa		4.87	□□□□□ -1.63
EIF4A1-231	ENST00000584054	SPTSSB	Q8NFR3	76 aa		4.87	□□□□□ -1.63
EIF4A1-231	ENST00000584054	KRTAP10-6	P60371	365 aa	Predicted RBP	4.85	□□□□□ -1.63
EIF4A1-231	ENST00000584054	SERP1	Q9Y6X1	66 aa		4.85	□□□□□ -1.63
EIF4A1-231	ENST00000584054	CHKB-CPT1B	H3BT56	60 aa		4.84	□□□□□ -1.63
EIF4A1-231	ENST00000584054	RPS28	P62857	69 aa	Known RBP	4.84	□□□□□ -1.63
EIF4A1-231	ENST00000584054	KRTAP9-7	A8MTY7	169 aa		4.82	□□□□□ -1.64
EIF4A1-231	ENST00000584054	KRTAP9-8	Q9BYQ0	159 aa		4.82	□□□□□ -1.64
EIF4A1-231	ENST00000584054	COA5	Q86WW8	74 aa		4.8	□□□□□ -1.64
EIF4A1-231	ENST00000584054		V9GYY9	64 aa		4.8	□□□□□ -1.64
EIF4A1-231	ENST00000584054	LCE3B	Q5TA77	95 aa		4.79	□□□□□ -1.64
EIF4A1-231	ENST00000584054	KRTAP19-1	Q8IUB9	90 aa		4.79	□□□□□ -1.64
EIF4A1-231	ENST00000584054		M0R2T5	61 aa		4.77	□□□□□ -1.65
EIF4A1-231	ENST00000584054	KRTAP9-4	Q9BYQ2	154 aa		4.77	□□□□□ -1.65
EIF4A1-231	ENST00000584054		S4R3F8	94 aa		4.77	□□□□□ -1.65
EIF4A1-231	ENST00000584054	LCA10	Q71F78	164 aa		4.76	□□□□□ -1.65
EIF4A1-231	ENST00000584054	KRTAP4-12	Q9BQ66	201 aa		4.76	□□□□□ -1.65
EIF4A1-231	ENST00000584054	MT2A	P02795	61 aa		4.73	□□□□□ -1.65
EIF4A1-231	ENST00000584054	LCE4A	Q5TA78	99 aa		4.73	□□□□□ -1.65
EIF4A1-231	ENST00000584054	CSAG1	Q6PB30	78 aa		4.73	□□□□□ -1.65
EIF4A1-231	ENST00000584054	SMIM26	A0A096LP01	95 aa		4.72	□□□□□ -1.65
EIF4A1-231	ENST00000584054	MT1F	P04733	61 aa		4.69	□□□□□ -1.66
EIF4A1-231	ENST00000584054	PRR15L	Q9BU68	103 aa		4.68	□□□□□ -1.66
EIF4A1-231	ENST00000584054		H0YAA0	97 aa		4.66	□□□□□ -1.66
EIF4A1-231	ENST00000584054	KRTAP9-9	Q9BYP9	154 aa		4.66	□□□□□ -1.66
EIF4A1-231	ENST00000584054	KRTAP9-3	Q9BYQ3	159 aa		4.66	□□□□□ -1.66
EIF4A1-231	ENST00000584054		Q1T7F1	81 aa		4.64	□□□□□ -1.67
EIF4A1-231	ENST00000584054	CRCT1	Q9UGL9	99 aa		4.64	□□□□□ -1.67
EIF4A1-231	ENST00000584054	FSIP2	Q5CZC0	6907 aa		4.64	□□□□□ -1.67
EIF4A1-231	ENST00000584054	KRTAP4-8	A0A0G2JLE6	195 aa		4.63	□□□□□ -1.67
EIF4A1-231	ENST00000584054	NDUFAF8	A1L188	74 aa		4.63	□□□□□ -1.67
EIF4A1-231	ENST00000584054	LINC01558	Q9Y6Z2	57 aa		4.62	□□□□□ -1.67
EIF4A1-231	ENST00000584054		A0A1B0GU69	56 aa		4.6	□□□□□ -1.67
EIF4A1-231	ENST00000584054	KRTAP10-10	P60014	251 aa		4.6	□□□□□ -1.67
EIF4A1-231	ENST00000584054	LCE5A	Q5TCM9	118 aa		4.58	□□□□□ -1.68
EIF4A1-231	ENST00000584054	SPRR2G	Q9BYE4	73 aa		4.54	□□□□□ -1.68
EIF4A1-231	ENST00000584054	CRIPT	Q9P021	101 aa		4.53	□□□□□ -1.68
EIF4A1-231	ENST00000584054	ADM2	Q7Z4H4	148 aa		4.51	□□□□□ -1.69
EIF4A1-231	ENST00000584054	USH2A	O75445	5202 aa		4.51	□□□□□ -1.69
EIF4A1-231	ENST00000584054	UQCR11	O14957	56 aa		4.49	□□□□□ -1.69
EIF4A1-231	ENST00000584054		A0A1B0GU33	70 aa		4.48	□□□□□ -1.69
EIF4A1-231	ENST00000584054		M0QZ58	72 aa		4.48	□□□□□ -1.69
EIF4A1-231	ENST00000584054		P0C880	135 aa		4.48	□□□□□ -1.69
EIF4A1-231	ENST00000584054	KRTAP19-8	Q3LI54	63 aa		4.48	□□□□□ -1.69
EIF4A1-231	ENST00000584054	LCE1D	Q5T752	114 aa		4.48	□□□□□ -1.69
EIF4A1-231	ENST00000584054	KRTAP4-7	Q9BYR0	210 aa		4.48	□□□□□ -1.69
EIF4A1-231	ENST00000584054	PSPHP1	O15172	72 aa		4.46	□□□□□ -1.7
EIF4A1-231	ENST00000584054		R4GN34	69 aa		4.44	□□□□□ -1.7
EIF4A1-231	ENST00000584054		Q5VV11	94 aa		4.43	□□□□□ -1.7
EIF4A1-231	ENST00000584054	CAMK2N1	Q7Z7J9	78 aa		4.43	□□□□□ -1.7
EIF4A1-231	ENST00000584054		A6NED7	52 aa		4.42	□□□□□ -1.7
EIF4A1-231	ENST00000584054	SSPO	A2VEC9	5147 aa		4.42	□□□□□ -1.7
EIF4A1-231	ENST00000584054	MT1B	P07438	61 aa		4.41	□□□□□ -1.7
EIF4A1-231	ENST00000584054	MIR22HG	Q0VDD5	57 aa		4.37	□□□□□ -1.71
EIF4A1-231	ENST00000584054	KRTAP19-6	Q3LI70	58 aa		4.36	□□□□□ -1.71
EIF4A1-231	ENST00000584054	SPATA8	Q6RVD6	105 aa		4.35	□□□□□ -1.71
EIF4A1-231	ENST00000584054	KRTAP4-9	Q9BYQ8	210 aa		4.35	□□□□□ -1.71
EIF4A1-231	ENST00000584054	PRO0628	Q9UI54	55 aa		4.35	□□□□□ -1.71
EIF4A1-231	ENST00000584054		K7ERS5	55 aa		4.34	□□□□□ -1.71
EIF4A1-231	ENST00000584054	CDC42SE1	Q9NRR8	79 aa		4.34	□□□□□ -1.71
EIF4A1-231	ENST00000584054		A6NN06	94 aa		4.33	□□□□□ -1.72
EIF4A1-231	ENST00000584054	KRTAP13-4	Q3LI77	160 aa		4.32	□□□□□ -1.72
EIF4A1-231	ENST00000584054	KRTAP4-2	Q9BYR5	136 aa		4.27	□□□□□ -1.73
EIF4A1-231	ENST00000584054	BRK1	Q8WUW1	75 aa		4.26	□□□□□ -1.73
EIF4A1-231	ENST00000584054	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.26	□□□□□ -1.73
EIF4A1-231	ENST00000584054	KRTAP10-5	P60370	271 aa		4.25	□□□□□ -1.73
EIF4A1-231	ENST00000584054	LINC01554	Q52M75	96 aa		4.24	□□□□□ -1.73
EIF4A1-231	ENST00000584054	PLAC4	Q8WY50	150 aa		4.23	□□□□□ -1.73
EIF4A1-231	ENST00000584054		A0A0D9SG42	100 aa		4.22	□□□□□ -1.73
EIF4A1-231	ENST00000584054	MT1X	P80297	61 aa		4.2	□□□□□ -1.74
EIF4A1-231	ENST00000584054		A8MU10	97 aa		4.18	□□□□□ -1.74
EIF4A1-231	ENST00000584054	MT3	P25713	68 aa		4.18	□□□□□ -1.74
EIF4A1-231	ENST00000584054	LCE1A	Q5T7P2	110 aa		4.18	□□□□□ -1.74
EIF4A1-231	ENST00000584054	KRTAP4-11	Q9BYQ6	195 aa		4.18	□□□□□ -1.74
EIF4A1-231	ENST00000584054	SPINT4	Q6UDR6	99 aa		4.17	□□□□□ -1.74
EIF4A1-231	ENST00000584054	KRTAP12-1	P59990	96 aa		4.16	□□□□□ -1.74
EIF4A1-231	ENST00000584054	PRO2289	Q9P1D8	64 aa		4.12	□□□□□ -1.75
EIF4A1-231	ENST00000584054	KRTAP12-2	P59991	146 aa		4.11	□□□□□ -1.75
EIF4A1-231	ENST00000584054	MACF1	Q9UPN3	7388 aa	Known RBP	4.1	□□□□□ -1.75
EIF4A1-231	ENST00000584054	LUZP6	Q538Z0	58 aa		4.09	□□□□□ -1.75
EIF4A1-231	ENST00000584054	SYNE2	Q8WXH0	6885 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms