RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 IGLV7-46A0A075B6I9 117 aa4.23□□□□□ -1.73
NF1-222ENST00000582892 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
NF1-222ENST00000582892 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
NF1-222ENST00000582892 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
NF1-222ENST00000582892 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
NF1-222ENST00000582892 USH2AO75445 5202 aa4.2□□□□□ -1.74
NF1-222ENST00000582892 IGHV6-1A0A0B4J1U7 121 aa4.2□□□□□ -1.74
NF1-222ENST00000582892 LOC101927531A0A1B0GV80 90 aa4.2□□□□□ -1.74
NF1-222ENST00000582892 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
NF1-222ENST00000582892 RETNLBQ9BQ08 111 aa4.19□□□□□ -1.74
NF1-222ENST00000582892 LIMD2Q9BT23 127 aa4.18□□□□□ -1.74
NF1-222ENST00000582892 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
NF1-222ENST00000582892 ANAPC11Q9NYG5 84 aa4.17□□□□□ -1.74
NF1-222ENST00000582892 NDUFS5O43920 106 aa4.15□□□□□ -1.75
NF1-222ENST00000582892 COA5Q86WW8 74 aa4.15□□□□□ -1.75
NF1-222ENST00000582892 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
NF1-222ENST00000582892 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
NF1-222ENST00000582892 A0A087X002 238 aa4.13□□□□□ -1.75
NF1-222ENST00000582892 LINC00313P59037 77 aa4.13□□□□□ -1.75
NF1-222ENST00000582892 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
NF1-222ENST00000582892 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
NF1-222ENST00000582892 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
NF1-222ENST00000582892 PCOTHQ58A44 107 aa4.12□□□□□ -1.75
NF1-222ENST00000582892 Q5VV11 94 aa4.11□□□□□ -1.75
NF1-222ENST00000582892 A8MUN3 132 aa4.1□□□□□ -1.75
NF1-222ENST00000582892 SPINK1P00995 79 aa4.1□□□□□ -1.75
NF1-222ENST00000582892 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
NF1-222ENST00000582892 Q5W150 140 aa4.1□□□□□ -1.75
NF1-222ENST00000582892 Q75L30 129 aa4.1□□□□□ -1.75
NF1-222ENST00000582892 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
NF1-222ENST00000582892 PSPHP1O15172 72 aa4.09□□□□□ -1.75
NF1-222ENST00000582892 HRES1P13985 223 aa4.09□□□□□ -1.75
NF1-222ENST00000582892 MT3P25713 68 aa4.09□□□□□ -1.75
NF1-222ENST00000582892 MT1HP80294 61 aa4.09□□□□□ -1.75
NF1-222ENST00000582892 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
NF1-222ENST00000582892 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
NF1-222ENST00000582892 FLGP20930 4061 aaPredicted RBP4.07□□□□□ -1.76
NF1-222ENST00000582892 ACYP2P14621 99 aa4.07□□□□□ -1.76
NF1-222ENST00000582892 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
NF1-222ENST00000582892 SPAG11AQ6PDA7 123 aa4.07□□□□□ -1.76
NF1-222ENST00000582892 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
NF1-222ENST00000582892 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
NF1-222ENST00000582892 TYMSOSQ8TAI1 123 aa4.05□□□□□ -1.76
NF1-222ENST00000582892 CHKB-CPT1BH3BT56 60 aa4.04□□□□□ -1.76
NF1-222ENST00000582892 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
NF1-222ENST00000582892 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
NF1-222ENST00000582892 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
NF1-222ENST00000582892 ATP11AUNQ6ZP68 121 aa4.01□□□□□ -1.77
NF1-222ENST00000582892 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
NF1-222ENST00000582892 A6NED7 52 aa3.99□□□□□ -1.77
NF1-222ENST00000582892 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
NF1-222ENST00000582892 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
NF1-222ENST00000582892 C7orf65Q6ZTY9 151 aa3.97□□□□□ -1.77
NF1-222ENST00000582892 LCA10Q71F78 164 aa3.97□□□□□ -1.77
NF1-222ENST00000582892 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
NF1-222ENST00000582892 A8MUU9 505 aa3.95□□□□□ -1.78
NF1-222ENST00000582892 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
NF1-222ENST00000582892 C20orf166-AS1Q96NR2 134 aa3.95□□□□□ -1.78
NF1-222ENST00000582892 M0R2T5 61 aa3.92□□□□□ -1.78
NF1-222ENST00000582892 SPINK7P58062 85 aa3.92□□□□□ -1.78
NF1-222ENST00000582892 A0A1B0GU69 56 aa3.91□□□□□ -1.78
NF1-222ENST00000582892 A6NN06 94 aa3.91□□□□□ -1.78
NF1-222ENST00000582892 A8MU10 97 aa3.91□□□□□ -1.78
NF1-222ENST00000582892 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
NF1-222ENST00000582892 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
NF1-222ENST00000582892 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
NF1-222ENST00000582892 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
NF1-222ENST00000582892 UQCR11O14957 56 aa3.87□□□□□ -1.79
NF1-222ENST00000582892 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
NF1-222ENST00000582892 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
NF1-222ENST00000582892 SEC61GP60059 68 aa3.84□□□□□ -1.79
NF1-222ENST00000582892 MIR22HGQ0VDD5 57 aa3.83□□□□□ -1.8
NF1-222ENST00000582892 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
NF1-222ENST00000582892 NEBP20929 6669 aa3.8□□□□□ -1.8
NF1-222ENST00000582892 COX6B2Q6YFQ2 88 aa3.8□□□□□ -1.8
NF1-222ENST00000582892 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
NF1-222ENST00000582892 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
NF1-222ENST00000582892 RBM12B-AS1Q9P1G2 102 aa3.73□□□□□ -1.81
NF1-222ENST00000582892 A0A1B0GU33 70 aa3.72□□□□□ -1.81
NF1-222ENST00000582892 MT2AP02795 61 aa3.72□□□□□ -1.81
NF1-222ENST00000582892 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
NF1-222ENST00000582892 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
NF1-222ENST00000582892 MT1FP04733 61 aa3.71□□□□□ -1.82
NF1-222ENST00000582892 H0YAA0 97 aa3.69□□□□□ -1.82
NF1-222ENST00000582892 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
NF1-222ENST00000582892 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
NF1-222ENST00000582892 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
NF1-222ENST00000582892 KMT2DO14686 5537 aa3.65□□□□□ -1.83
NF1-222ENST00000582892 K7ERS5 55 aa3.64□□□□□ -1.83
NF1-222ENST00000582892 S4R3F8 94 aa3.64□□□□□ -1.83
NF1-222ENST00000582892 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
NF1-222ENST00000582892 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
NF1-222ENST00000582892 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
NF1-222ENST00000582892 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
NF1-222ENST00000582892 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
NF1-222ENST00000582892 CSAG1Q6PB30 78 aa3.55□□□□□ -1.84
NF1-222ENST00000582892 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
NF1-222ENST00000582892 M0QZ58 72 aa3.52□□□□□ -1.85
NF1-222ENST00000582892 ROMO1P60602 79 aa3.52□□□□□ -1.85
NF1-222ENST00000582892 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms