RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MT1HP80294 61 aa7.03□□□□□ -1.28
CSNK1D-220ENST00000581737 COA5Q86WW8 74 aa7.03□□□□□ -1.28
CSNK1D-220ENST00000581737 V9GYY9 64 aa7.03□□□□□ -1.28
CSNK1D-220ENST00000581737 CHKB-CPT1BH3BT56 60 aa7.02□□□□□ -1.29
CSNK1D-220ENST00000581737 SPINK7P58062 85 aa7.01□□□□□ -1.29
CSNK1D-220ENST00000581737 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
CSNK1D-220ENST00000581737 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
CSNK1D-220ENST00000581737 KRTAP10-6P60371 365 aaPredicted RBP6.94□□□□□ -1.3
CSNK1D-220ENST00000581737 SPTSSBQ8NFR3 76 aa6.94□□□□□ -1.3
CSNK1D-220ENST00000581737 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
CSNK1D-220ENST00000581737 C4orf26Q17RF5 130 aa6.9□□□□□ -1.3
CSNK1D-220ENST00000581737 Q1T7F1 81 aa6.9□□□□□ -1.3
CSNK1D-220ENST00000581737 SSPOA2VEC9 5147 aa6.9□□□□□ -1.31
CSNK1D-220ENST00000581737 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
CSNK1D-220ENST00000581737 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
CSNK1D-220ENST00000581737 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
CSNK1D-220ENST00000581737 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
CSNK1D-220ENST00000581737 USH2AO75445 5202 aa6.88□□□□□ -1.31
CSNK1D-220ENST00000581737 PRR15LQ9BU68 103 aa6.82□□□□□ -1.32
CSNK1D-220ENST00000581737 LINC01558Q9Y6Z2 57 aa6.8□□□□□ -1.32
CSNK1D-220ENST00000581737 M0R2T5 61 aa6.76□□□□□ -1.33
CSNK1D-220ENST00000581737 SEC61GP60059 68 aa6.75□□□□□ -1.33
CSNK1D-220ENST00000581737 A0A1B0GU69 56 aa6.72□□□□□ -1.33
CSNK1D-220ENST00000581737 PSPHP1O15172 72 aa6.72□□□□□ -1.33
CSNK1D-220ENST00000581737 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
CSNK1D-220ENST00000581737 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.34
CSNK1D-220ENST00000581737 H1FX-AS1Q4G0G2 97 aa6.7□□□□□ -1.34
CSNK1D-220ENST00000581737 S4R3F8 94 aa6.7□□□□□ -1.34
CSNK1D-220ENST00000581737 Q5VV11 94 aa6.65□□□□□ -1.34
CSNK1D-220ENST00000581737 SYNE2Q8WXH0 6885 aaKnown RBP6.64□□□□□ -1.35
CSNK1D-220ENST00000581737 MACF1Q9UPN3 7388 aaKnown RBP6.63□□□□□ -1.35
CSNK1D-220ENST00000581737 A6NED7 52 aa6.61□□□□□ -1.35
CSNK1D-220ENST00000581737 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
CSNK1D-220ENST00000581737 LCA10Q71F78 164 aa6.58□□□□□ -1.36
CSNK1D-220ENST00000581737 BRK1Q8WUW1 75 aa6.58□□□□□ -1.36
CSNK1D-220ENST00000581737 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
CSNK1D-220ENST00000581737 UQCR11O14957 56 aa6.55□□□□□ -1.36
CSNK1D-220ENST00000581737 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
CSNK1D-220ENST00000581737 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
CSNK1D-220ENST00000581737 LCE2BO14633 110 aa6.5□□□□□ -1.37
CSNK1D-220ENST00000581737 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
CSNK1D-220ENST00000581737 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
CSNK1D-220ENST00000581737 MT2AP02795 61 aa6.45□□□□□ -1.38
CSNK1D-220ENST00000581737 MIR22HGQ0VDD5 57 aa6.45□□□□□ -1.38
CSNK1D-220ENST00000581737 A0A1B0GU33 70 aa6.44□□□□□ -1.38
CSNK1D-220ENST00000581737 H0YAA0 97 aa6.42□□□□□ -1.38
CSNK1D-220ENST00000581737 MT1FP04733 61 aa6.41□□□□□ -1.38
CSNK1D-220ENST00000581737 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
CSNK1D-220ENST00000581737 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.38
CSNK1D-220ENST00000581737 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
CSNK1D-220ENST00000581737 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
CSNK1D-220ENST00000581737 K7ERS5 55 aa6.31□□□□□ -1.4
CSNK1D-220ENST00000581737 M0QZ58 72 aa6.28□□□□□ -1.4
CSNK1D-220ENST00000581737 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
CSNK1D-220ENST00000581737 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
CSNK1D-220ENST00000581737 NEBP20929 6669 aa6.25□□□□□ -1.41
CSNK1D-220ENST00000581737 P0C880 135 aa6.24□□□□□ -1.41
CSNK1D-220ENST00000581737 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
CSNK1D-220ENST00000581737 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
CSNK1D-220ENST00000581737 A8MU10 97 aa6.21□□□□□ -1.42
CSNK1D-220ENST00000581737 R4GN34 69 aa6.2□□□□□ -1.42
CSNK1D-220ENST00000581737 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
CSNK1D-220ENST00000581737 CRIPTQ9P021 101 aa6.18□□□□□ -1.42
CSNK1D-220ENST00000581737 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
CSNK1D-220ENST00000581737 A6NN06 94 aa6.12□□□□□ -1.43
CSNK1D-220ENST00000581737 A0A0D9SG42 100 aa6.11□□□□□ -1.43
CSNK1D-220ENST00000581737 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
CSNK1D-220ENST00000581737 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
CSNK1D-220ENST00000581737 KTN1-AS1Q86SY8 53 aa6.04□□□□□ -1.44
CSNK1D-220ENST00000581737 LINC01554Q52M75 96 aa6.02□□□□□ -1.45
CSNK1D-220ENST00000581737 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
CSNK1D-220ENST00000581737 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
CSNK1D-220ENST00000581737 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
CSNK1D-220ENST00000581737 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
CSNK1D-220ENST00000581737 MDN1Q9NU22 5596 aa5.93□□□□□ -1.46
CSNK1D-220ENST00000581737 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
CSNK1D-220ENST00000581737 ROMO1P60602 79 aa5.91□□□□□ -1.46
CSNK1D-220ENST00000581737 MT1BP07438 61 aa5.9□□□□□ -1.46
CSNK1D-220ENST00000581737 KMT2DO14686 5537 aa5.88□□□□□ -1.47
CSNK1D-220ENST00000581737 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
CSNK1D-220ENST00000581737 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
CSNK1D-220ENST00000581737 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
CSNK1D-220ENST00000581737 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
CSNK1D-220ENST00000581737 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
CSNK1D-220ENST00000581737 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
CSNK1D-220ENST00000581737 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
CSNK1D-220ENST00000581737 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
CSNK1D-220ENST00000581737 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
CSNK1D-220ENST00000581737 MT1XP80297 61 aa5.61□□□□□ -1.51
CSNK1D-220ENST00000581737 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
CSNK1D-220ENST00000581737 TNP1P09430 55 aa5.58□□□□□ -1.52
CSNK1D-220ENST00000581737 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
CSNK1D-220ENST00000581737 SPRR2EP22531 72 aa5.52□□□□□ -1.53
CSNK1D-220ENST00000581737 SPRR2BP35325 72 aa5.52□□□□□ -1.53
CSNK1D-220ENST00000581737 SPRR2AP35326 72 aa5.52□□□□□ -1.53
CSNK1D-220ENST00000581737 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
CSNK1D-220ENST00000581737 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
CSNK1D-220ENST00000581737 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
CSNK1D-220ENST00000581737 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
CSNK1D-220ENST00000581737 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms