RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
CDK5RAP3-218ENST00000580391 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.2
CDK5RAP3-218ENST00000580391 KTN1-AS1Q86SY8 53 aa7.59□□□□□ -1.2
CDK5RAP3-218ENST00000580391 PSPHP1O15172 72 aa7.53□□□□□ -1.2
CDK5RAP3-218ENST00000580391 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
CDK5RAP3-218ENST00000580391 LINC01558Q9Y6Z2 57 aa7.48□□□□□ -1.21
CDK5RAP3-218ENST00000580391 PRR15LQ9BU68 103 aa7.46□□□□□ -1.21
CDK5RAP3-218ENST00000580391 Q5VV11 94 aa7.43□□□□□ -1.22
CDK5RAP3-218ENST00000580391 LCA10Q71F78 164 aa7.41□□□□□ -1.22
CDK5RAP3-218ENST00000580391 H1FX-AS1Q4G0G2 97 aa7.4□□□□□ -1.22
CDK5RAP3-218ENST00000580391 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
CDK5RAP3-218ENST00000580391 S4R3F8 94 aa7.4□□□□□ -1.23
CDK5RAP3-218ENST00000580391 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
CDK5RAP3-218ENST00000580391 MUC2Q02817 5179 aa7.38□□□□□ -1.23
CDK5RAP3-218ENST00000580391 H3BS24 57 aa7.37□□□□□ -1.23
CDK5RAP3-218ENST00000580391 A6NN06 94 aa7.35□□□□□ -1.23
CDK5RAP3-218ENST00000580391 A0A1B0GU69 56 aa7.34□□□□□ -1.23
CDK5RAP3-218ENST00000580391 A6NED7 52 aa7.32□□□□□ -1.24
CDK5RAP3-218ENST00000580391 A8MU10 97 aa7.31□□□□□ -1.24
CDK5RAP3-218ENST00000580391 KRTAP19-2Q3LHN2 52 aa7.31□□□□□ -1.24
CDK5RAP3-218ENST00000580391 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
CDK5RAP3-218ENST00000580391 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
CDK5RAP3-218ENST00000580391 CDC42SE1Q9NRR8 79 aa7.28□□□□□ -1.24
CDK5RAP3-218ENST00000580391 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
CDK5RAP3-218ENST00000580391 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
CDK5RAP3-218ENST00000580391 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
CDK5RAP3-218ENST00000580391 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
CDK5RAP3-218ENST00000580391 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
CDK5RAP3-218ENST00000580391 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
CDK5RAP3-218ENST00000580391 UQCR11O14957 56 aa7.12□□□□□ -1.27
CDK5RAP3-218ENST00000580391 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
CDK5RAP3-218ENST00000580391 A0A1B0GU33 70 aa7.09□□□□□ -1.27
CDK5RAP3-218ENST00000580391 P0C880 135 aa7.09□□□□□ -1.27
CDK5RAP3-218ENST00000580391 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
CDK5RAP3-218ENST00000580391 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
CDK5RAP3-218ENST00000580391 H0YAA0 97 aa7.04□□□□□ -1.28
CDK5RAP3-218ENST00000580391 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
CDK5RAP3-218ENST00000580391 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
CDK5RAP3-218ENST00000580391 PRAC1Q96KF2 57 aa6.98□□□□□ -1.29
CDK5RAP3-218ENST00000580391 MT1HP80294 61 aa6.95□□□□□ -1.3
CDK5RAP3-218ENST00000580391 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
CDK5RAP3-218ENST00000580391 M0R2T5 61 aa6.88□□□□□ -1.31
CDK5RAP3-218ENST00000580391 A0A0D9SG42 100 aa6.85□□□□□ -1.31
CDK5RAP3-218ENST00000580391 M0QZ58 72 aa6.83□□□□□ -1.32
CDK5RAP3-218ENST00000580391 R4GN34 69 aa6.81□□□□□ -1.32
CDK5RAP3-218ENST00000580391 MT2AP02795 61 aa6.7□□□□□ -1.34
CDK5RAP3-218ENST00000580391 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
CDK5RAP3-218ENST00000580391 KRTAP12-2P59991 146 aa6.69□□□□□ -1.34
CDK5RAP3-218ENST00000580391 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
CDK5RAP3-218ENST00000580391 K7ERS5 55 aa6.68□□□□□ -1.34
CDK5RAP3-218ENST00000580391 MT1FP04733 61 aa6.68□□□□□ -1.34
CDK5RAP3-218ENST00000580391 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
CDK5RAP3-218ENST00000580391 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
CDK5RAP3-218ENST00000580391 ROMO1P60602 79 aa6.64□□□□□ -1.35
CDK5RAP3-218ENST00000580391 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
CDK5RAP3-218ENST00000580391 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
CDK5RAP3-218ENST00000580391 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
CDK5RAP3-218ENST00000580391 SPRR2GQ9BYE4 73 aa6.57□□□□□ -1.36
CDK5RAP3-218ENST00000580391 A0A0A0MQY5 61 aa6.53□□□□□ -1.36
CDK5RAP3-218ENST00000580391 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
CDK5RAP3-218ENST00000580391 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
CDK5RAP3-218ENST00000580391 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
CDK5RAP3-218ENST00000580391 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
CDK5RAP3-218ENST00000580391 PLAC4Q8WY50 150 aa6.35□□□□□ -1.39
CDK5RAP3-218ENST00000580391 MT1BP07438 61 aa6.33□□□□□ -1.4
CDK5RAP3-218ENST00000580391 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
CDK5RAP3-218ENST00000580391 LCE2BO14633 110 aa6.28□□□□□ -1.4
CDK5RAP3-218ENST00000580391 USH2AO75445 5202 aa6.18□□□□□ -1.42
CDK5RAP3-218ENST00000580391 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
CDK5RAP3-218ENST00000580391 MT1XP80297 61 aa6.15□□□□□ -1.43
CDK5RAP3-218ENST00000580391 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
CDK5RAP3-218ENST00000580391 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
CDK5RAP3-218ENST00000580391 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
CDK5RAP3-218ENST00000580391 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.43
CDK5RAP3-218ENST00000580391 TNP1P09430 55 aa6.07□□□□□ -1.44
CDK5RAP3-218ENST00000580391 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
CDK5RAP3-218ENST00000580391 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
CDK5RAP3-218ENST00000580391 SSPOA2VEC9 5147 aa5.99□□□□□ -1.45
CDK5RAP3-218ENST00000580391 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
CDK5RAP3-218ENST00000580391 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
CDK5RAP3-218ENST00000580391 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
CDK5RAP3-218ENST00000580391 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
CDK5RAP3-218ENST00000580391 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
CDK5RAP3-218ENST00000580391 KRTAP10-12P60413 245 aa5.84□□□□□ -1.47
CDK5RAP3-218ENST00000580391 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.48
CDK5RAP3-218ENST00000580391 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
CDK5RAP3-218ENST00000580391 KRTAP9-6A0A140TA67 174 aa5.79□□□□□ -1.48
CDK5RAP3-218ENST00000580391 KMT2DO14686 5537 aa5.75□□□□□ -1.49
CDK5RAP3-218ENST00000580391 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
CDK5RAP3-218ENST00000580391 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
CDK5RAP3-218ENST00000580391 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
CDK5RAP3-218ENST00000580391 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
CDK5RAP3-218ENST00000580391 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
CDK5RAP3-218ENST00000580391 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
CDK5RAP3-218ENST00000580391 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
CDK5RAP3-218ENST00000580391 MACF1Q9UPN3 7388 aaKnown RBP5.43□□□□□ -1.54
CDK5RAP3-218ENST00000580391 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
CDK5RAP3-218ENST00000580391 MT1EP04732 61 aa5.37□□□□□ -1.55
CDK5RAP3-218ENST00000580391 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
CDK5RAP3-218ENST00000580391 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms