RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
TRAPPC1-204ENST00000571947 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
TRAPPC1-204ENST00000571947 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
TRAPPC1-204ENST00000571947 SPINK7P58062 85 aa3.25□□□□□ -1.89
TRAPPC1-204ENST00000571947 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
TRAPPC1-204ENST00000571947 COA5Q86WW8 74 aa3.25□□□□□ -1.89
TRAPPC1-204ENST00000571947 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
TRAPPC1-204ENST00000571947 ACYP2P14621 99 aa3.24□□□□□ -1.89
TRAPPC1-204ENST00000571947 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
TRAPPC1-204ENST00000571947 MYCBP2O75592 4640 aa3.24□□□□□ -1.89
TRAPPC1-204ENST00000571947 HERC2O95714 4834 aa3.22□□□□□ -1.89
TRAPPC1-204ENST00000571947 A8MUN3 132 aa3.21□□□□□ -1.9
TRAPPC1-204ENST00000571947 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
TRAPPC1-204ENST00000571947 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
TRAPPC1-204ENST00000571947 Q1T7F1 81 aa3.19□□□□□ -1.9
TRAPPC1-204ENST00000571947 CHKB-CPT1BH3BT56 60 aa3.18□□□□□ -1.9
TRAPPC1-204ENST00000571947 COX6B2Q6YFQ2 88 aa3.18□□□□□ -1.9
TRAPPC1-204ENST00000571947 MPLKIPQ8TAP9 179 aa3.18□□□□□ -1.9
TRAPPC1-204ENST00000571947 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
TRAPPC1-204ENST00000571947 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
TRAPPC1-204ENST00000571947 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
TRAPPC1-204ENST00000571947 SEC61BP60468 96 aaKnown RBP3.16□□□□□ -1.9
TRAPPC1-204ENST00000571947 LCE5AQ5TCM9 118 aa3.15□□□□□ -1.91
TRAPPC1-204ENST00000571947 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
TRAPPC1-204ENST00000571947 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
TRAPPC1-204ENST00000571947 SPTSSBQ8NFR3 76 aa3.12□□□□□ -1.91
TRAPPC1-204ENST00000571947 PRR15LQ9BU68 103 aa3.12□□□□□ -1.91
TRAPPC1-204ENST00000571947 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
TRAPPC1-204ENST00000571947 PSPHP1O15172 72 aa3.11□□□□□ -1.91
TRAPPC1-204ENST00000571947 LRP2P98164 4655 aa3.1□□□□□ -1.91
TRAPPC1-204ENST00000571947 Q5VV11 94 aa3.1□□□□□ -1.91
TRAPPC1-204ENST00000571947 RBM12B-AS1Q9P1G2 102 aa3.1□□□□□ -1.91
TRAPPC1-204ENST00000571947 LPAP08519 4548 aa3.1□□□□□ -1.91
TRAPPC1-204ENST00000571947 H1FX-AS1Q4G0G2 97 aa3.09□□□□□ -1.91
TRAPPC1-204ENST00000571947 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
TRAPPC1-204ENST00000571947 A0A1B0GU69 56 aa3.07□□□□□ -1.92
TRAPPC1-204ENST00000571947 S4R3F8 94 aa3.07□□□□□ -1.92
TRAPPC1-204ENST00000571947 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
TRAPPC1-204ENST00000571947 LCA10Q71F78 164 aa3.06□□□□□ -1.92
TRAPPC1-204ENST00000571947 KTN1-AS1Q86SY8 53 aa3.06□□□□□ -1.92
TRAPPC1-204ENST00000571947 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
TRAPPC1-204ENST00000571947 PCLOQ9Y6V0 5065 aa3.03□□□□□ -1.92
TRAPPC1-204ENST00000571947 A6NED7 52 aa3.02□□□□□ -1.93
TRAPPC1-204ENST00000571947 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
TRAPPC1-204ENST00000571947 CSAG1Q6PB30 78 aa3□□□□□ -1.93
TRAPPC1-204ENST00000571947 HERC1Q15751 4861 aa3□□□□□ -1.93
TRAPPC1-204ENST00000571947 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
TRAPPC1-204ENST00000571947 UQCR11O14957 56 aa2.98□□□□□ -1.93
TRAPPC1-204ENST00000571947 A0A1B0GU33 70 aa2.97□□□□□ -1.93
TRAPPC1-204ENST00000571947 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
TRAPPC1-204ENST00000571947 A8MU10 97 aa2.96□□□□□ -1.94
TRAPPC1-204ENST00000571947 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC1-204ENST00000571947 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
TRAPPC1-204ENST00000571947 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
TRAPPC1-204ENST00000571947 H0YAA0 97 aa2.95□□□□□ -1.94
TRAPPC1-204ENST00000571947 ADM2Q7Z4H4 148 aa2.94□□□□□ -1.94
TRAPPC1-204ENST00000571947 P0C880 135 aa2.92□□□□□ -1.94
TRAPPC1-204ENST00000571947 FLGP20930 4061 aaPredicted RBP2.9□□□□□ -1.94
TRAPPC1-204ENST00000571947 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
TRAPPC1-204ENST00000571947 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
TRAPPC1-204ENST00000571947 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
TRAPPC1-204ENST00000571947 M0QZ58 72 aa2.87□□□□□ -1.95
TRAPPC1-204ENST00000571947 A6NN06 94 aa2.85□□□□□ -1.95
TRAPPC1-204ENST00000571947 MT1HP80294 61 aa2.85□□□□□ -1.95
TRAPPC1-204ENST00000571947 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
TRAPPC1-204ENST00000571947 KRTAP23-1A1A580 65 aa2.83□□□□□ -1.96
TRAPPC1-204ENST00000571947 K7ERS5 55 aa2.83□□□□□ -1.96
TRAPPC1-204ENST00000571947 A0A0D9SG42 100 aa2.82□□□□□ -1.96
TRAPPC1-204ENST00000571947 M0R2T5 61 aa2.82□□□□□ -1.96
TRAPPC1-204ENST00000571947 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
TRAPPC1-204ENST00000571947 R4GN34 69 aa2.82□□□□□ -1.96
TRAPPC1-204ENST00000571947 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
TRAPPC1-204ENST00000571947 MUC2Q02817 5179 aa2.79□□□□□ -1.96
TRAPPC1-204ENST00000571947 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
TRAPPC1-204ENST00000571947 KRTAP12-2P59991 146 aa2.77□□□□□ -1.97
TRAPPC1-204ENST00000571947 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
TRAPPC1-204ENST00000571947 MT2AP02795 61 aa2.76□□□□□ -1.97
TRAPPC1-204ENST00000571947 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
TRAPPC1-204ENST00000571947 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
TRAPPC1-204ENST00000571947 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
TRAPPC1-204ENST00000571947 MT1FP04733 61 aa2.73□□□□□ -1.97
TRAPPC1-204ENST00000571947 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
TRAPPC1-204ENST00000571947 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
TRAPPC1-204ENST00000571947 ROMO1P60602 79 aa2.71□□□□□ -1.98
TRAPPC1-204ENST00000571947 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
TRAPPC1-204ENST00000571947 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
TRAPPC1-204ENST00000571947 KRTAP19-8Q3LI54 63 aa2.66□□□□□ -1.98
TRAPPC1-204ENST00000571947 KRTAP15-1Q3LI76 137 aa2.65□□□□□ -1.99
TRAPPC1-204ENST00000571947 PLAC4Q8WY50 150 aa2.65□□□□□ -1.99
TRAPPC1-204ENST00000571947 C10orf95Q9H7T3 257 aa2.63□□□□□ -1.99
TRAPPC1-204ENST00000571947 MT1BP07438 61 aa2.61□□□□□ -1.99
TRAPPC1-204ENST00000571947 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
TRAPPC1-204ENST00000571947 TNP1P09430 55 aa2.54□□□□□ -2
TRAPPC1-204ENST00000571947 KRTAP10-5P60370 271 aa2.53□□□□□ -2
TRAPPC1-204ENST00000571947 MT1XP80297 61 aa2.53□□□□□ -2
TRAPPC1-204ENST00000571947 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
TRAPPC1-204ENST00000571947 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
TRAPPC1-204ENST00000571947 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
TRAPPC1-204ENST00000571947 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC1-204ENST00000571947 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 701.5 ms