RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 NDUFC1O43677 76 aa6.91□□□□□ -1.3
KLHDC4-222ENST00000568444 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
KLHDC4-222ENST00000568444 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
KLHDC4-222ENST00000568444 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.3
KLHDC4-222ENST00000568444 H7BZZ5 65 aa6.87□□□□□ -1.31
KLHDC4-222ENST00000568444 ACYP2P14621 99 aa6.86□□□□□ -1.31
KLHDC4-222ENST00000568444 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
KLHDC4-222ENST00000568444 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
KLHDC4-222ENST00000568444 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
KLHDC4-222ENST00000568444 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
KLHDC4-222ENST00000568444 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
KLHDC4-222ENST00000568444 MT2AP02795 61 aa6.74□□□□□ -1.33
KLHDC4-222ENST00000568444 LCE2DQ5TA82 110 aaPredicted RBP6.73□□□□□ -1.33
KLHDC4-222ENST00000568444 COA5Q86WW8 74 aa6.72□□□□□ -1.33
KLHDC4-222ENST00000568444 KRTAP10-10P60014 251 aa6.71□□□□□ -1.34
KLHDC4-222ENST00000568444 SPTSSBQ8NFR3 76 aa6.71□□□□□ -1.34
KLHDC4-222ENST00000568444 ATP5EP56381 51 aaPredicted RBP6.7□□□□□ -1.34
KLHDC4-222ENST00000568444 MT1FP04733 61 aa6.69□□□□□ -1.34
KLHDC4-222ENST00000568444 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
KLHDC4-222ENST00000568444 PCP4P48539 62 aa6.68□□□□□ -1.34
KLHDC4-222ENST00000568444 TMEM258P61165 79 aa6.68□□□□□ -1.34
KLHDC4-222ENST00000568444 H0YAA0 97 aa6.62□□□□□ -1.35
KLHDC4-222ENST00000568444 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
KLHDC4-222ENST00000568444 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
KLHDC4-222ENST00000568444 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
KLHDC4-222ENST00000568444 P0C880 135 aa6.5□□□□□ -1.37
KLHDC4-222ENST00000568444 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
KLHDC4-222ENST00000568444 CRIPTQ9P021 101 aa6.47□□□□□ -1.37
KLHDC4-222ENST00000568444 SERP1Q9Y6X1 66 aa6.47□□□□□ -1.37
KLHDC4-222ENST00000568444 SEC61GP60059 68 aa6.46□□□□□ -1.38
KLHDC4-222ENST00000568444 LCE2BO14633 110 aa6.42□□□□□ -1.38
KLHDC4-222ENST00000568444 R4GN34 69 aa6.42□□□□□ -1.38
KLHDC4-222ENST00000568444 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
KLHDC4-222ENST00000568444 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
KLHDC4-222ENST00000568444 M0QZ58 72 aa6.39□□□□□ -1.39
KLHDC4-222ENST00000568444 A0A1B0GU69 56 aa6.37□□□□□ -1.39
KLHDC4-222ENST00000568444 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
KLHDC4-222ENST00000568444 Q5VV11 94 aa6.31□□□□□ -1.4
KLHDC4-222ENST00000568444 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
KLHDC4-222ENST00000568444 USH2AO75445 5202 aa6.31□□□□□ -1.4
KLHDC4-222ENST00000568444 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
KLHDC4-222ENST00000568444 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
KLHDC4-222ENST00000568444 A0A1B0GU33 70 aa6.27□□□□□ -1.41
KLHDC4-222ENST00000568444 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
KLHDC4-222ENST00000568444 RPS28P62857 69 aaKnown RBP6.25□□□□□ -1.41
KLHDC4-222ENST00000568444 SMIM26A0A096LP01 95 aa6.24□□□□□ -1.41
KLHDC4-222ENST00000568444 MT1BP07438 61 aa6.24□□□□□ -1.41
KLHDC4-222ENST00000568444 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
KLHDC4-222ENST00000568444 V9GYY9 64 aa6.24□□□□□ -1.41
KLHDC4-222ENST00000568444 Q1T7F1 81 aa6.2□□□□□ -1.42
KLHDC4-222ENST00000568444 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
KLHDC4-222ENST00000568444 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
KLHDC4-222ENST00000568444 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
KLHDC4-222ENST00000568444 SSPOA2VEC9 5147 aa6.15□□□□□ -1.42
KLHDC4-222ENST00000568444 A0A0D9SG42 100 aa6.15□□□□□ -1.42
KLHDC4-222ENST00000568444 PSPHP1O15172 72 aa6.15□□□□□ -1.42
KLHDC4-222ENST00000568444 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
KLHDC4-222ENST00000568444 A6NN06 94 aa6.1□□□□□ -1.43
KLHDC4-222ENST00000568444 UQCR11O14957 56 aa6.1□□□□□ -1.43
KLHDC4-222ENST00000568444 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
KLHDC4-222ENST00000568444 A8MU10 97 aa6.06□□□□□ -1.44
KLHDC4-222ENST00000568444 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
KLHDC4-222ENST00000568444 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
KLHDC4-222ENST00000568444 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
KLHDC4-222ENST00000568444 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
KLHDC4-222ENST00000568444 A6NED7 52 aa5.98□□□□□ -1.45
KLHDC4-222ENST00000568444 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
KLHDC4-222ENST00000568444 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
KLHDC4-222ENST00000568444 NEBP20929 6669 aa5.96□□□□□ -1.46
KLHDC4-222ENST00000568444 KRTAP12-2P59991 146 aa5.96□□□□□ -1.46
KLHDC4-222ENST00000568444 MT1XP80297 61 aa5.96□□□□□ -1.46
KLHDC4-222ENST00000568444 K7ERS5 55 aa5.83□□□□□ -1.48
KLHDC4-222ENST00000568444 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
KLHDC4-222ENST00000568444 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
KLHDC4-222ENST00000568444 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
KLHDC4-222ENST00000568444 KRTAP10-7P60409 375 aaPredicted RBP5.71□□□□□ -1.5
KLHDC4-222ENST00000568444 MUC12Q9UKN1 5478 aa5.68□□□□□ -1.5
KLHDC4-222ENST00000568444 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
KLHDC4-222ENST00000568444 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
KLHDC4-222ENST00000568444 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
KLHDC4-222ENST00000568444 TNP1P09430 55 aa5.6□□□□□ -1.51
KLHDC4-222ENST00000568444 KMT2DO14686 5537 aa5.58□□□□□ -1.52
KLHDC4-222ENST00000568444 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
KLHDC4-222ENST00000568444 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
KLHDC4-222ENST00000568444 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
KLHDC4-222ENST00000568444 GPR98Q8WXG9 6306 aa5.55□□□□□ -1.52
KLHDC4-222ENST00000568444 ROMO1P60602 79 aa5.5□□□□□ -1.53
KLHDC4-222ENST00000568444 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
KLHDC4-222ENST00000568444 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
KLHDC4-222ENST00000568444 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
KLHDC4-222ENST00000568444 LCE3AQ5TA76 89 aa5.43□□□□□ -1.54
KLHDC4-222ENST00000568444 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
KLHDC4-222ENST00000568444 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
KLHDC4-222ENST00000568444 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
KLHDC4-222ENST00000568444 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
KLHDC4-222ENST00000568444 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
KLHDC4-222ENST00000568444 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
KLHDC4-222ENST00000568444 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
KLHDC4-222ENST00000568444 SPRR2EP22531 72 aa5.27□□□□□ -1.57
KLHDC4-222ENST00000568444 SPRR2BP35325 72 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms