RNA–Protein interactions for RNA: ENST00000566251.1

TUBGCP4-211, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-211ENST00000566251 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
TUBGCP4-211ENST00000566251 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
TUBGCP4-211ENST00000566251 HRES1P13985 223 aa5.26□□□□□ -1.57
TUBGCP4-211ENST00000566251 SPINK7P58062 85 aa5.26□□□□□ -1.57
TUBGCP4-211ENST00000566251 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
TUBGCP4-211ENST00000566251 SERP1Q9Y6X1 66 aa5.25□□□□□ -1.57
TUBGCP4-211ENST00000566251 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
TUBGCP4-211ENST00000566251 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
TUBGCP4-211ENST00000566251 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
TUBGCP4-211ENST00000566251 ACYP2P14621 99 aa5.22□□□□□ -1.57
TUBGCP4-211ENST00000566251 A8MUN3 132 aa5.21□□□□□ -1.58
TUBGCP4-211ENST00000566251 DMAC1Q96GE9 116 aa5.18□□□□□ -1.58
TUBGCP4-211ENST00000566251 C4orf26Q17RF5 130 aa5.16□□□□□ -1.58
TUBGCP4-211ENST00000566251 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.59
TUBGCP4-211ENST00000566251 LRP2P98164 4655 aa5.15□□□□□ -1.59
TUBGCP4-211ENST00000566251 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
TUBGCP4-211ENST00000566251 COA5Q86WW8 74 aa5.14□□□□□ -1.59
TUBGCP4-211ENST00000566251 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
TUBGCP4-211ENST00000566251 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
TUBGCP4-211ENST00000566251 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
TUBGCP4-211ENST00000566251 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
TUBGCP4-211ENST00000566251 KRTAP9-3Q9BYQ3 159 aa5.11□□□□□ -1.59
TUBGCP4-211ENST00000566251 KRTAP9-2Q9BYQ4 174 aa5.09□□□□□ -1.59
TUBGCP4-211ENST00000566251 V9GYY9 64 aa5.07□□□□□ -1.6
TUBGCP4-211ENST00000566251 H1FX-AS1Q4G0G2 97 aa5.04□□□□□ -1.6
TUBGCP4-211ENST00000566251 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
TUBGCP4-211ENST00000566251 Q1T7F1 81 aa5□□□□□ -1.61
TUBGCP4-211ENST00000566251 LPAP08519 4548 aa5□□□□□ -1.61
TUBGCP4-211ENST00000566251 S4R3F8 94 aa4.99□□□□□ -1.61
TUBGCP4-211ENST00000566251 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
TUBGCP4-211ENST00000566251 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
TUBGCP4-211ENST00000566251 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
TUBGCP4-211ENST00000566251 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
TUBGCP4-211ENST00000566251 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
TUBGCP4-211ENST00000566251 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
TUBGCP4-211ENST00000566251 LCA10Q71F78 164 aa4.92□□□□□ -1.62
TUBGCP4-211ENST00000566251 A0A1B0GU69 56 aa4.91□□□□□ -1.62
TUBGCP4-211ENST00000566251 MUC2Q02817 5179 aa4.9□□□□□ -1.62
TUBGCP4-211ENST00000566251 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
TUBGCP4-211ENST00000566251 PSPHP1O15172 72 aa4.88□□□□□ -1.63
TUBGCP4-211ENST00000566251 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
TUBGCP4-211ENST00000566251 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
TUBGCP4-211ENST00000566251 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
TUBGCP4-211ENST00000566251 Q5VV11 94 aa4.81□□□□□ -1.64
TUBGCP4-211ENST00000566251 A6NED7 52 aa4.79□□□□□ -1.64
TUBGCP4-211ENST00000566251 H0YAA0 97 aa4.78□□□□□ -1.64
TUBGCP4-211ENST00000566251 UQCR11O14957 56 aa4.78□□□□□ -1.64
TUBGCP4-211ENST00000566251 A0A1B0GU33 70 aa4.76□□□□□ -1.65
TUBGCP4-211ENST00000566251 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
TUBGCP4-211ENST00000566251 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
TUBGCP4-211ENST00000566251 M0R2T5 61 aa4.74□□□□□ -1.65
TUBGCP4-211ENST00000566251 BRK1Q8WUW1 75 aa4.71□□□□□ -1.66
TUBGCP4-211ENST00000566251 MIR22HGQ0VDD5 57 aa4.7□□□□□ -1.66
TUBGCP4-211ENST00000566251 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
TUBGCP4-211ENST00000566251 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
TUBGCP4-211ENST00000566251 M0QZ58 72 aa4.67□□□□□ -1.66
TUBGCP4-211ENST00000566251 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
TUBGCP4-211ENST00000566251 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
TUBGCP4-211ENST00000566251 P0C880 135 aa4.66□□□□□ -1.66
TUBGCP4-211ENST00000566251 MT1HP80294 61 aa4.66□□□□□ -1.66
TUBGCP4-211ENST00000566251 FSIP2Q5CZC0 6907 aa4.66□□□□□ -1.66
TUBGCP4-211ENST00000566251 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
TUBGCP4-211ENST00000566251 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
TUBGCP4-211ENST00000566251 R4GN34 69 aa4.62□□□□□ -1.67
TUBGCP4-211ENST00000566251 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
TUBGCP4-211ENST00000566251 K7ERS5 55 aa4.6□□□□□ -1.67
TUBGCP4-211ENST00000566251 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
TUBGCP4-211ENST00000566251 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
TUBGCP4-211ENST00000566251 A0A0D9SG42 100 aa4.53□□□□□ -1.68
TUBGCP4-211ENST00000566251 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
TUBGCP4-211ENST00000566251 A8MU10 97 aa4.52□□□□□ -1.69
TUBGCP4-211ENST00000566251 KRTAP10-10P60014 251 aa4.52□□□□□ -1.69
TUBGCP4-211ENST00000566251 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
TUBGCP4-211ENST00000566251 MT2AP02795 61 aa4.48□□□□□ -1.69
TUBGCP4-211ENST00000566251 PMAIP1Q13794 54 aa4.48□□□□□ -1.69
TUBGCP4-211ENST00000566251 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
TUBGCP4-211ENST00000566251 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
TUBGCP4-211ENST00000566251 A6NN06 94 aa4.46□□□□□ -1.7
TUBGCP4-211ENST00000566251 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
TUBGCP4-211ENST00000566251 MT1FP04733 61 aa4.43□□□□□ -1.7
TUBGCP4-211ENST00000566251 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
TUBGCP4-211ENST00000566251 MT3P25713 68 aa4.42□□□□□ -1.7
TUBGCP4-211ENST00000566251 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
TUBGCP4-211ENST00000566251 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
TUBGCP4-211ENST00000566251 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
TUBGCP4-211ENST00000566251 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
TUBGCP4-211ENST00000566251 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
TUBGCP4-211ENST00000566251 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
TUBGCP4-211ENST00000566251 ROMO1P60602 79 aa4.31□□□□□ -1.72
TUBGCP4-211ENST00000566251 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
TUBGCP4-211ENST00000566251 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
TUBGCP4-211ENST00000566251 USH2AO75445 5202 aa4.22□□□□□ -1.73
TUBGCP4-211ENST00000566251 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
TUBGCP4-211ENST00000566251 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
TUBGCP4-211ENST00000566251 MT1BP07438 61 aa4.19□□□□□ -1.74
TUBGCP4-211ENST00000566251 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
TUBGCP4-211ENST00000566251 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
TUBGCP4-211ENST00000566251 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
TUBGCP4-211ENST00000566251 TNP1P09430 55 aa4.14□□□□□ -1.75
TUBGCP4-211ENST00000566251 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms