RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 FLGP20930 4061 aaPredicted RBP7.38□□□□□ -1.23
SPG7-213ENST00000566221 DMAC1Q96GE9 116 aa7.37□□□□□ -1.23
SPG7-213ENST00000566221 MT1HP80294 61 aa7.35□□□□□ -1.23
SPG7-213ENST00000566221 ACYP2P14621 99 aa7.34□□□□□ -1.23
SPG7-213ENST00000566221 H1FX-AS1Q4G0G2 97 aa7.34□□□□□ -1.23
SPG7-213ENST00000566221 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
SPG7-213ENST00000566221 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
SPG7-213ENST00000566221 M0R2T5 61 aa7.27□□□□□ -1.25
SPG7-213ENST00000566221 SERP1Q9Y6X1 66 aa7.24□□□□□ -1.25
SPG7-213ENST00000566221 S4R3F8 94 aa7.23□□□□□ -1.25
SPG7-213ENST00000566221 RPS28P62857 69 aaKnown RBP7.22□□□□□ -1.25
SPG7-213ENST00000566221 COA5Q86WW8 74 aa7.21□□□□□ -1.26
SPG7-213ENST00000566221 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
SPG7-213ENST00000566221 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
SPG7-213ENST00000566221 LCA10Q71F78 164 aa7.16□□□□□ -1.26
SPG7-213ENST00000566221 SPTSSBQ8NFR3 76 aa7.16□□□□□ -1.26
SPG7-213ENST00000566221 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
SPG7-213ENST00000566221 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
SPG7-213ENST00000566221 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
SPG7-213ENST00000566221 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
SPG7-213ENST00000566221 SMIM26A0A096LP01 95 aa7.05□□□□□ -1.28
SPG7-213ENST00000566221 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
SPG7-213ENST00000566221 V9GYY9 64 aa6.99□□□□□ -1.29
SPG7-213ENST00000566221 MT2AP02795 61 aa6.98□□□□□ -1.29
SPG7-213ENST00000566221 Q1T7F1 81 aa6.93□□□□□ -1.3
SPG7-213ENST00000566221 LINC01558Q9Y6Z2 57 aa6.93□□□□□ -1.3
SPG7-213ENST00000566221 MT1FP04733 61 aa6.92□□□□□ -1.3
SPG7-213ENST00000566221 H0YAA0 97 aa6.91□□□□□ -1.3
SPG7-213ENST00000566221 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
SPG7-213ENST00000566221 SEC61GP60059 68 aa6.91□□□□□ -1.3
SPG7-213ENST00000566221 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
SPG7-213ENST00000566221 A0A1B0GU69 56 aa6.85□□□□□ -1.31
SPG7-213ENST00000566221 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
SPG7-213ENST00000566221 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
SPG7-213ENST00000566221 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
SPG7-213ENST00000566221 SSPOA2VEC9 5147 aa6.77□□□□□ -1.32
SPG7-213ENST00000566221 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
SPG7-213ENST00000566221 CRIPTQ9P021 101 aa6.75□□□□□ -1.33
SPG7-213ENST00000566221 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
SPG7-213ENST00000566221 P0C880 135 aa6.73□□□□□ -1.33
SPG7-213ENST00000566221 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
SPG7-213ENST00000566221 PSPHP1O15172 72 aa6.72□□□□□ -1.33
SPG7-213ENST00000566221 USH2AO75445 5202 aa6.71□□□□□ -1.34
SPG7-213ENST00000566221 Q5VV11 94 aa6.7□□□□□ -1.34
SPG7-213ENST00000566221 A0A1B0GU33 70 aa6.69□□□□□ -1.34
SPG7-213ENST00000566221 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
SPG7-213ENST00000566221 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
SPG7-213ENST00000566221 M0QZ58 72 aa6.65□□□□□ -1.34
SPG7-213ENST00000566221 UQCR11O14957 56 aa6.65□□□□□ -1.34
SPG7-213ENST00000566221 LCE2BO14633 110 aa6.64□□□□□ -1.35
SPG7-213ENST00000566221 R4GN34 69 aa6.64□□□□□ -1.35
SPG7-213ENST00000566221 A6NED7 52 aa6.57□□□□□ -1.36
SPG7-213ENST00000566221 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
SPG7-213ENST00000566221 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SPG7-213ENST00000566221 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
SPG7-213ENST00000566221 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
SPG7-213ENST00000566221 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
SPG7-213ENST00000566221 MT1BP07438 61 aa6.47□□□□□ -1.37
SPG7-213ENST00000566221 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
SPG7-213ENST00000566221 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
SPG7-213ENST00000566221 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
SPG7-213ENST00000566221 NEBP20929 6669 aa6.43□□□□□ -1.38
SPG7-213ENST00000566221 A6NN06 94 aa6.42□□□□□ -1.38
SPG7-213ENST00000566221 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
SPG7-213ENST00000566221 A0A0D9SG42 100 aa6.37□□□□□ -1.39
SPG7-213ENST00000566221 BRK1Q8WUW1 75 aa6.37□□□□□ -1.39
SPG7-213ENST00000566221 A8MU10 97 aa6.36□□□□□ -1.39
SPG7-213ENST00000566221 KRTAP20-1Q3LI63 56 aa6.36□□□□□ -1.39
SPG7-213ENST00000566221 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
SPG7-213ENST00000566221 K7ERS5 55 aa6.34□□□□□ -1.39
SPG7-213ENST00000566221 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
SPG7-213ENST00000566221 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
SPG7-213ENST00000566221 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
SPG7-213ENST00000566221 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
SPG7-213ENST00000566221 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
SPG7-213ENST00000566221 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
SPG7-213ENST00000566221 MT1XP80297 61 aa6.19□□□□□ -1.42
SPG7-213ENST00000566221 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
SPG7-213ENST00000566221 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
SPG7-213ENST00000566221 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
SPG7-213ENST00000566221 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
SPG7-213ENST00000566221 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
SPG7-213ENST00000566221 ROMO1P60602 79 aa6□□□□□ -1.45
SPG7-213ENST00000566221 KMT2DO14686 5537 aa5.97□□□□□ -1.45
SPG7-213ENST00000566221 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
SPG7-213ENST00000566221 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
SPG7-213ENST00000566221 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
SPG7-213ENST00000566221 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
SPG7-213ENST00000566221 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
SPG7-213ENST00000566221 TNP1P09430 55 aa5.87□□□□□ -1.47
SPG7-213ENST00000566221 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
SPG7-213ENST00000566221 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
SPG7-213ENST00000566221 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
SPG7-213ENST00000566221 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
SPG7-213ENST00000566221 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
SPG7-213ENST00000566221 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
SPG7-213ENST00000566221 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
SPG7-213ENST00000566221 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
SPG7-213ENST00000566221 SPRR2EP22531 72 aa5.73□□□□□ -1.49
SPG7-213ENST00000566221 SPRR2BP35325 72 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms