RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 S4R3F8 94 aa12.54□□□□□ -0.4
NME3-208ENST00000565379 KRTAP9-7A8MTY7 169 aa12.53□□□□□ -0.4
NME3-208ENST00000565379 COX7CP15954 63 aa12.53□□□□□ -0.4
NME3-208ENST00000565379 C20orf197Q8N268 126 aa12.53□□□□□ -0.4
NME3-208ENST00000565379 SNURFQ9Y675 71 aa12.5□□□□□ -0.41
NME3-208ENST00000565379 MT1FP04733 61 aa12.47□□□□□ -0.41
NME3-208ENST00000565379 ANAPC13Q9BS18 74 aa12.44□□□□□ -0.42
NME3-208ENST00000565379 DMAC1Q96GE9 116 aa12.43□□□□□ -0.42
NME3-208ENST00000565379 LCA10Q71F78 164 aa12.42□□□□□ -0.42
NME3-208ENST00000565379 CSAG1Q6PB30 78 aa12.4□□□□□ -0.42
NME3-208ENST00000565379 SPANXA2-OT1Q8N9U9 137 aa12.35□□□□□ -0.43
NME3-208ENST00000565379 LCE2BO14633 110 aa12.34□□□□□ -0.43
NME3-208ENST00000565379 NDUFC1O43677 76 aa12.32□□□□□ -0.44
NME3-208ENST00000565379 KRTAP10-10P60014 251 aa12.32□□□□□ -0.44
NME3-208ENST00000565379 KRTAP9-3Q9BYQ3 159 aa12.32□□□□□ -0.44
NME3-208ENST00000565379 ACYP2P14621 99 aa12.3□□□□□ -0.44
NME3-208ENST00000565379 KRTAP3-3Q9BYR6 98 aa12.29□□□□□ -0.44
NME3-208ENST00000565379 FCGBPQ9Y6R7 5405 aaPredicted RBP12.25□□□□□ -0.45
NME3-208ENST00000565379 KRTAP19-1Q8IUB9 90 aa12.24□□□□□ -0.45
NME3-208ENST00000565379 H7BZZ5 65 aa12.15□□□□□ -0.46
NME3-208ENST00000565379 CCDC179H3BU77 68 aa12.1□□□□□ -0.47
NME3-208ENST00000565379 CYSTM1Q9H1C7 97 aa12.1□□□□□ -0.47
NME3-208ENST00000565379 SPTSSBQ8NFR3 76 aa12.07□□□□□ -0.48
NME3-208ENST00000565379 CHKB-CPT1BH3BT56 60 aa12.06□□□□□ -0.48
NME3-208ENST00000565379 H0YAA0 97 aa12.05□□□□□ -0.48
NME3-208ENST00000565379 KRTAP19-6Q3LI70 58 aa11.93□□□□□ -0.5
NME3-208ENST00000565379 MACF1Q9UPN3 7388 aaKnown RBP11.92□□□□□ -0.5
NME3-208ENST00000565379 COA5Q86WW8 74 aa11.9□□□□□ -0.5
NME3-208ENST00000565379 ATP5EP56381 51 aaPredicted RBP11.89□□□□□ -0.51
NME3-208ENST00000565379 ADM2Q7Z4H4 148 aa11.85□□□□□ -0.51
NME3-208ENST00000565379 CRIPTQ9P021 101 aa11.84□□□□□ -0.51
NME3-208ENST00000565379 SYNE2Q8WXH0 6885 aaKnown RBP11.82□□□□□ -0.52
NME3-208ENST00000565379 TMEM258P61165 79 aa11.79□□□□□ -0.52
NME3-208ENST00000565379 SPRR2GQ9BYE4 73 aa11.69□□□□□ -0.54
NME3-208ENST00000565379 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
NME3-208ENST00000565379 P0C880 135 aa11.63□□□□□ -0.55
NME3-208ENST00000565379 KRTAP6-3Q3LI67 103 aa11.63□□□□□ -0.55
NME3-208ENST00000565379 PCP4P48539 62 aa11.55□□□□□ -0.56
NME3-208ENST00000565379 R4GN34 69 aa11.55□□□□□ -0.56
NME3-208ENST00000565379 SEC61GP60059 68 aa11.53□□□□□ -0.56
NME3-208ENST00000565379 KRTAP19-8Q3LI54 63 aa11.5□□□□□ -0.57
NME3-208ENST00000565379 SERP1Q9Y6X1 66 aa11.48□□□□□ -0.57
NME3-208ENST00000565379 Q5VV11 94 aa11.46□□□□□ -0.57
NME3-208ENST00000565379 M0QZ58 72 aa11.45□□□□□ -0.58
NME3-208ENST00000565379 MT1BP07438 61 aa11.41□□□□□ -0.58
NME3-208ENST00000565379 A0A1B0GU69 56 aa11.32□□□□□ -0.6
NME3-208ENST00000565379 PRR15LQ9BU68 103 aa11.24□□□□□ -0.61
NME3-208ENST00000565379 A6NN06 94 aa11.23□□□□□ -0.61
NME3-208ENST00000565379 LINC01558Q9Y6Z2 57 aa11.23□□□□□ -0.61
NME3-208ENST00000565379 A0A1B0GU33 70 aa11.21□□□□□ -0.61
NME3-208ENST00000565379 LINC01554Q52M75 96 aa11.21□□□□□ -0.61
NME3-208ENST00000565379 PLAC4Q8WY50 150 aa11.18□□□□□ -0.62
NME3-208ENST00000565379 NEBP20929 6669 aa11.15□□□□□ -0.62
NME3-208ENST00000565379 KRTAP10-5P60370 271 aa11.11□□□□□ -0.63
NME3-208ENST00000565379 KRTAP13-4Q3LI77 160 aa11.11□□□□□ -0.63
NME3-208ENST00000565379 V9GYY9 64 aa11.08□□□□□ -0.64
NME3-208ENST00000565379 RPS28P62857 69 aaKnown RBP11.06□□□□□ -0.64
NME3-208ENST00000565379 MUC12Q9UKN1 5478 aa11.03□□□□□ -0.64
NME3-208ENST00000565379 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
NME3-208ENST00000565379 SPATA8Q6RVD6 105 aa10.99□□□□□ -0.65
NME3-208ENST00000565379 Q1T7F1 81 aa10.97□□□□□ -0.65
NME3-208ENST00000565379 KRTAP20-1Q3LI63 56 aa10.96□□□□□ -0.65
NME3-208ENST00000565379 PRO2289Q9P1D8 64 aa10.94□□□□□ -0.66
NME3-208ENST00000565379 KRTAP5-9P26371 169 aa10.91□□□□□ -0.66
NME3-208ENST00000565379 A0A0D9SG42 100 aa10.88□□□□□ -0.67
NME3-208ENST00000565379 UQCR11O14957 56 aa10.85□□□□□ -0.67
NME3-208ENST00000565379 MT1XP80297 61 aa10.81□□□□□ -0.68
NME3-208ENST00000565379 KMT2DO14686 5537 aa10.8□□□□□ -0.68
NME3-208ENST00000565379 PSPHP1O15172 72 aa10.76□□□□□ -0.69
NME3-208ENST00000565379 MDN1Q9NU22 5596 aa10.75□□□□□ -0.69
NME3-208ENST00000565379 SPINT4Q6UDR6 99 aa10.72□□□□□ -0.69
NME3-208ENST00000565379 CAMK2N1Q7Z7J9 78 aa10.72□□□□□ -0.69
NME3-208ENST00000565379 A8MU10 97 aa10.7□□□□□ -0.7
NME3-208ENST00000565379 KRTAP12-1P59990 96 aa10.7□□□□□ -0.7
NME3-208ENST00000565379 MIR22HGQ0VDD5 57 aa10.64□□□□□ -0.71
NME3-208ENST00000565379 KRTAP12-2P59991 146 aa10.61□□□□□ -0.71
NME3-208ENST00000565379 KRTAP2-3P0C7H8 128 aa10.6□□□□□ -0.71
NME3-208ENST00000565379 KRTAP2-4Q9BYR9 128 aa10.6□□□□□ -0.71
NME3-208ENST00000565379 A6NED7 52 aa10.49□□□□□ -0.73
NME3-208ENST00000565379 SPRR2FQ96RM1 72 aa10.47□□□□□ -0.73
NME3-208ENST00000565379 SPRR2EP22531 72 aa10.42□□□□□ -0.74
NME3-208ENST00000565379 SPRR2BP35325 72 aa10.42□□□□□ -0.74
NME3-208ENST00000565379 SPRR2AP35326 72 aa10.42□□□□□ -0.74
NME3-208ENST00000565379 K7ERS5 55 aa10.39□□□□□ -0.75
NME3-208ENST00000565379 KRTAP8-1Q8IUC2 63 aa10.33□□□□□ -0.76
NME3-208ENST00000565379 KRTAP10-12P60413 245 aa10.32□□□□□ -0.76
NME3-208ENST00000565379 KRTAP10-7P60409 375 aaPredicted RBP10.31□□□□□ -0.76
NME3-208ENST00000565379 KRTAP4-8A0A0G2JLE6 195 aa10.29□□□□□ -0.76
NME3-208ENST00000565379 KRTAP4-8Q9BYQ9 185 aa10.29□□□□□ -0.76
NME3-208ENST00000565379 LCE1AQ5T7P2 110 aa10.24□□□□□ -0.77
NME3-208ENST00000565379 KRTAP2-2Q9BYT5 123 aa10.23□□□□□ -0.77
NME3-208ENST00000565379 KRTAP2-1Q9BYU5 128 aa10.23□□□□□ -0.77
NME3-208ENST00000565379 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
NME3-208ENST00000565379 C10orf95Q9H7T3 257 aa10.16□□□□□ -0.78
NME3-208ENST00000565379 TNP1P09430 55 aa10.09□□□□□ -0.79
NME3-208ENST00000565379 SPRR2DP22532 72 aa10.08□□□□□ -0.8
NME3-208ENST00000565379 KRTAP25-1Q3LHN0 102 aa9.88□□□□□ -0.83
NME3-208ENST00000565379 LCE3BQ5TA77 95 aa9.85□□□□□ -0.83
NME3-208ENST00000565379 BRK1Q8WUW1 75 aa9.76□□□□□ -0.85
NME3-208ENST00000565379 ROMO1P60602 79 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms