RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 LINC01558Q9Y6Z2 57 aa7.91□□□□□ -1.14
COMMD4-210ENST00000564587 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
COMMD4-210ENST00000564587 LPAP08519 4548 aa7.87□□□□□ -1.15
COMMD4-210ENST00000564587 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
COMMD4-210ENST00000564587 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
COMMD4-210ENST00000564587 S4R3F8 94 aa7.82□□□□□ -1.16
COMMD4-210ENST00000564587 MUC17Q685J3 4493 aa7.8□□□□□ -1.16
COMMD4-210ENST00000564587 PSPHP1O15172 72 aa7.78□□□□□ -1.16
COMMD4-210ENST00000564587 A0A1B0GU69 56 aa7.77□□□□□ -1.17
COMMD4-210ENST00000564587 SEC61GP60059 68 aa7.77□□□□□ -1.17
COMMD4-210ENST00000564587 KRTAP4-1Q9BYQ7 146 aa7.77□□□□□ -1.17
COMMD4-210ENST00000564587 MUC2Q02817 5179 aa7.75□□□□□ -1.17
COMMD4-210ENST00000564587 LCA10Q71F78 164 aa7.75□□□□□ -1.17
COMMD4-210ENST00000564587 Q5VV11 94 aa7.73□□□□□ -1.17
COMMD4-210ENST00000564587 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
COMMD4-210ENST00000564587 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
COMMD4-210ENST00000564587 A6NED7 52 aa7.61□□□□□ -1.19
COMMD4-210ENST00000564587 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
COMMD4-210ENST00000564587 FSIP2Q5CZC0 6907 aa7.58□□□□□ -1.2
COMMD4-210ENST00000564587 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
COMMD4-210ENST00000564587 UQCR11O14957 56 aa7.57□□□□□ -1.2
COMMD4-210ENST00000564587 H0YAA0 97 aa7.54□□□□□ -1.2
COMMD4-210ENST00000564587 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
COMMD4-210ENST00000564587 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
COMMD4-210ENST00000564587 A0A1B0GU33 70 aa7.51□□□□□ -1.21
COMMD4-210ENST00000564587 CDC42SE1Q9NRR8 79 aa7.5□□□□□ -1.21
COMMD4-210ENST00000564587 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.22
COMMD4-210ENST00000564587 MIR22HGQ0VDD5 57 aa7.46□□□□□ -1.22
COMMD4-210ENST00000564587 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
COMMD4-210ENST00000564587 SVIPQ8NHG7 77 aa7.46□□□□□ -1.22
COMMD4-210ENST00000564587 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
COMMD4-210ENST00000564587 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
COMMD4-210ENST00000564587 PRO0628Q9UI54 55 aa7.45□□□□□ -1.22
COMMD4-210ENST00000564587 LCE2CQ5TA81 110 aa7.41□□□□□ -1.22
COMMD4-210ENST00000564587 LCE2DQ5TA82 110 aaPredicted RBP7.38□□□□□ -1.23
COMMD4-210ENST00000564587 P0C880 135 aa7.37□□□□□ -1.23
COMMD4-210ENST00000564587 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
COMMD4-210ENST00000564587 M0QZ58 72 aa7.33□□□□□ -1.24
COMMD4-210ENST00000564587 A8MU10 97 aa7.29□□□□□ -1.24
COMMD4-210ENST00000564587 MT1HP80294 61 aa7.28□□□□□ -1.24
COMMD4-210ENST00000564587 M0R2T5 61 aa7.27□□□□□ -1.25
COMMD4-210ENST00000564587 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
COMMD4-210ENST00000564587 R4GN34 69 aa7.22□□□□□ -1.25
COMMD4-210ENST00000564587 K7ERS5 55 aa7.21□□□□□ -1.26
COMMD4-210ENST00000564587 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
COMMD4-210ENST00000564587 PMAIP1Q13794 54 aa7.17□□□□□ -1.26
COMMD4-210ENST00000564587 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
COMMD4-210ENST00000564587 A0A0D9SG42 100 aa7.12□□□□□ -1.27
COMMD4-210ENST00000564587 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
COMMD4-210ENST00000564587 A6NN06 94 aa7.08□□□□□ -1.28
COMMD4-210ENST00000564587 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.03□□□□□ -1.28
COMMD4-210ENST00000564587 LINC01554Q52M75 96 aa7.02□□□□□ -1.29
COMMD4-210ENST00000564587 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
COMMD4-210ENST00000564587 MT2AP02795 61 aa7.01□□□□□ -1.29
COMMD4-210ENST00000564587 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
COMMD4-210ENST00000564587 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
COMMD4-210ENST00000564587 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
COMMD4-210ENST00000564587 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
COMMD4-210ENST00000564587 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.3
COMMD4-210ENST00000564587 MT1FP04733 61 aa6.94□□□□□ -1.3
COMMD4-210ENST00000564587 KTN1-AS1Q86SY8 53 aa6.89□□□□□ -1.31
COMMD4-210ENST00000564587 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
COMMD4-210ENST00000564587 ROMO1P60602 79 aa6.84□□□□□ -1.31
COMMD4-210ENST00000564587 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
COMMD4-210ENST00000564587 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
COMMD4-210ENST00000564587 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
COMMD4-210ENST00000564587 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
COMMD4-210ENST00000564587 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
COMMD4-210ENST00000564587 USH2AO75445 5202 aa6.75□□□□□ -1.33
COMMD4-210ENST00000564587 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
COMMD4-210ENST00000564587 SYNE2Q8WXH0 6885 aaKnown RBP6.64□□□□□ -1.35
COMMD4-210ENST00000564587 PRAC1Q96KF2 57 aa6.61□□□□□ -1.35
COMMD4-210ENST00000564587 C10orf95Q9H7T3 257 aa6.61□□□□□ -1.35
COMMD4-210ENST00000564587 MT1BP07438 61 aa6.6□□□□□ -1.35
COMMD4-210ENST00000564587 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
COMMD4-210ENST00000564587 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
COMMD4-210ENST00000564587 LCE2BO14633 110 aa6.53□□□□□ -1.36
COMMD4-210ENST00000564587 TNP1P09430 55 aa6.49□□□□□ -1.37
COMMD4-210ENST00000564587 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
COMMD4-210ENST00000564587 MT1XP80297 61 aa6.41□□□□□ -1.38
COMMD4-210ENST00000564587 KRTAP10-5P60370 271 aa6.4□□□□□ -1.38
COMMD4-210ENST00000564587 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
COMMD4-210ENST00000564587 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
COMMD4-210ENST00000564587 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
COMMD4-210ENST00000564587 NEBP20929 6669 aa6.28□□□□□ -1.4
COMMD4-210ENST00000564587 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
COMMD4-210ENST00000564587 KRTAP19-6Q3LI70 58 aa6.2□□□□□ -1.42
COMMD4-210ENST00000564587 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
COMMD4-210ENST00000564587 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
COMMD4-210ENST00000564587 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
COMMD4-210ENST00000564587 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
COMMD4-210ENST00000564587 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
COMMD4-210ENST00000564587 MDN1Q9NU22 5596 aa5.94□□□□□ -1.46
COMMD4-210ENST00000564587 KMT2DO14686 5537 aa5.93□□□□□ -1.46
COMMD4-210ENST00000564587 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
COMMD4-210ENST00000564587 KRTAP2-3P0C7H8 128 aa5.86□□□□□ -1.47
COMMD4-210ENST00000564587 KRTAP2-4Q9BYR9 128 aa5.86□□□□□ -1.47
COMMD4-210ENST00000564587 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
COMMD4-210ENST00000564587 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
COMMD4-210ENST00000564587 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms