RNA–Protein interactions for RNA: ENST00000564105.5

CTU2-204, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 1 (best)

Gene CTU2, Length 1,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-204ENST00000564105 LCE2DQ5TA82 110 aaPredicted RBP9.41□□□□□ -0.9
CTU2-204ENST00000564105 S4R3F8 94 aa9.37□□□□□ -0.91
CTU2-204ENST00000564105 FSIP2Q5CZC0 6907 aa9.36□□□□□ -0.91
CTU2-204ENST00000564105 M0R2T5 61 aa9.35□□□□□ -0.91
CTU2-204ENST00000564105 ACYP2P14621 99 aa9.33□□□□□ -0.92
CTU2-204ENST00000564105 LCA10Q71F78 164 aa9.31□□□□□ -0.92
CTU2-204ENST00000564105 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
CTU2-204ENST00000564105 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
CTU2-204ENST00000564105 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
CTU2-204ENST00000564105 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
CTU2-204ENST00000564105 TMEM258P61165 79 aa9.21□□□□□ -0.93
CTU2-204ENST00000564105 ATP5EP56381 51 aaPredicted RBP9.2□□□□□ -0.94
CTU2-204ENST00000564105 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
CTU2-204ENST00000564105 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
CTU2-204ENST00000564105 COA5Q86WW8 74 aa9.16□□□□□ -0.94
CTU2-204ENST00000564105 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
CTU2-204ENST00000564105 KRTAP9-8Q9BYQ0 159 aa9.03□□□□□ -0.96
CTU2-204ENST00000564105 MT2AP02795 61 aa8.98□□□□□ -0.97
CTU2-204ENST00000564105 H0YAA0 97 aa8.93□□□□□ -0.98
CTU2-204ENST00000564105 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
CTU2-204ENST00000564105 MT1FP04733 61 aa8.91□□□□□ -0.98
CTU2-204ENST00000564105 KRTAP10-10P60014 251 aa8.9□□□□□ -0.98
CTU2-204ENST00000564105 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
CTU2-204ENST00000564105 USH2AO75445 5202 aa8.83□□□□□ -1
CTU2-204ENST00000564105 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
CTU2-204ENST00000564105 SSPOA2VEC9 5147 aa8.79□□□□□ -1
CTU2-204ENST00000564105 P0C880 135 aa8.78□□□□□ -1
CTU2-204ENST00000564105 RPS28P62857 69 aaKnown RBP8.77□□□□□ -1.01
CTU2-204ENST00000564105 SEC61GP60059 68 aa8.74□□□□□ -1.01
CTU2-204ENST00000564105 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
CTU2-204ENST00000564105 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
CTU2-204ENST00000564105 A0A1B0GU69 56 aa8.67□□□□□ -1.02
CTU2-204ENST00000564105 LINC01558Q9Y6Z2 57 aa8.67□□□□□ -1.02
CTU2-204ENST00000564105 SMIM26A0A096LP01 95 aa8.63□□□□□ -1.03
CTU2-204ENST00000564105 LCE2BO14633 110 aa8.62□□□□□ -1.03
CTU2-204ENST00000564105 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
CTU2-204ENST00000564105 KRTAP19-1Q8IUB9 90 aa8.61□□□□□ -1.03
CTU2-204ENST00000564105 R4GN34 69 aa8.61□□□□□ -1.03
CTU2-204ENST00000564105 FCGBPQ9Y6R7 5405 aaPredicted RBP8.6□□□□□ -1.03
CTU2-204ENST00000564105 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
CTU2-204ENST00000564105 SPRR2GQ9BYE4 73 aa8.6□□□□□ -1.03
CTU2-204ENST00000564105 M0QZ58 72 aa8.58□□□□□ -1.04
CTU2-204ENST00000564105 V9GYY9 64 aa8.57□□□□□ -1.04
CTU2-204ENST00000564105 Q1T7F1 81 aa8.56□□□□□ -1.04
CTU2-204ENST00000564105 KRTAP9-7A8MTY7 169 aa8.53□□□□□ -1.04
CTU2-204ENST00000564105 A0A1B0GU33 70 aa8.52□□□□□ -1.04
CTU2-204ENST00000564105 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
CTU2-204ENST00000564105 PSPHP1O15172 72 aa8.44□□□□□ -1.06
CTU2-204ENST00000564105 KRTAP19-8Q3LI54 63 aa8.44□□□□□ -1.06
CTU2-204ENST00000564105 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
CTU2-204ENST00000564105 Q5VV11 94 aa8.41□□□□□ -1.06
CTU2-204ENST00000564105 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
CTU2-204ENST00000564105 SVIPQ8NHG7 77 aa8.36□□□□□ -1.07
CTU2-204ENST00000564105 MT1BP07438 61 aa8.35□□□□□ -1.07
CTU2-204ENST00000564105 UQCR11O14957 56 aa8.34□□□□□ -1.07
CTU2-204ENST00000564105 MACF1Q9UPN3 7388 aaKnown RBP8.32□□□□□ -1.08
CTU2-204ENST00000564105 KRTAP19-6Q3LI70 58 aa8.31□□□□□ -1.08
CTU2-204ENST00000564105 A0A0D9SG42 100 aa8.3□□□□□ -1.08
CTU2-204ENST00000564105 SYNE2Q8WXH0 6885 aaKnown RBP8.28□□□□□ -1.08
CTU2-204ENST00000564105 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
CTU2-204ENST00000564105 A6NN06 94 aa8.25□□□□□ -1.09
CTU2-204ENST00000564105 A8MU10 97 aa8.23□□□□□ -1.09
CTU2-204ENST00000564105 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
CTU2-204ENST00000564105 A6NED7 52 aa8.19□□□□□ -1.1
CTU2-204ENST00000564105 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
CTU2-204ENST00000564105 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
CTU2-204ENST00000564105 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
CTU2-204ENST00000564105 KRTAP10-5P60370 271 aa8.02□□□□□ -1.13
CTU2-204ENST00000564105 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.13
CTU2-204ENST00000564105 MT1XP80297 61 aa8□□□□□ -1.13
CTU2-204ENST00000564105 KRTAP6-3Q3LI67 103 aa7.98□□□□□ -1.13
CTU2-204ENST00000564105 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
CTU2-204ENST00000564105 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
CTU2-204ENST00000564105 K7ERS5 55 aa7.92□□□□□ -1.14
CTU2-204ENST00000564105 BRK1Q8WUW1 75 aa7.84□□□□□ -1.15
CTU2-204ENST00000564105 MUC12Q9UKN1 5478 aa7.79□□□□□ -1.16
CTU2-204ENST00000564105 PRO0628Q9UI54 55 aa7.77□□□□□ -1.17
CTU2-204ENST00000564105 NEBP20929 6669 aa7.75□□□□□ -1.17
CTU2-204ENST00000564105 C10orf95Q9H7T3 257 aa7.72□□□□□ -1.17
CTU2-204ENST00000564105 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
CTU2-204ENST00000564105 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
CTU2-204ENST00000564105 KMT2DO14686 5537 aa7.59□□□□□ -1.19
CTU2-204ENST00000564105 KRTAP5-9P26371 169 aa7.58□□□□□ -1.2
CTU2-204ENST00000564105 TNP1P09430 55 aa7.56□□□□□ -1.2
CTU2-204ENST00000564105 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
CTU2-204ENST00000564105 ROMO1P60602 79 aa7.51□□□□□ -1.21
CTU2-204ENST00000564105 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.21
CTU2-204ENST00000564105 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.21
CTU2-204ENST00000564105 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
CTU2-204ENST00000564105 KRTAP20-1Q3LI63 56 aa7.45□□□□□ -1.22
CTU2-204ENST00000564105 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
CTU2-204ENST00000564105 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
CTU2-204ENST00000564105 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
CTU2-204ENST00000564105 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
CTU2-204ENST00000564105 SPRR2EP22531 72 aa7.22□□□□□ -1.25
CTU2-204ENST00000564105 SPRR2BP35325 72 aa7.22□□□□□ -1.25
CTU2-204ENST00000564105 SPRR2AP35326 72 aa7.22□□□□□ -1.25
CTU2-204ENST00000564105 KRTAP2-3P0C7H8 128 aa7.2□□□□□ -1.26
CTU2-204ENST00000564105 KRTAP2-4Q9BYR9 128 aa7.2□□□□□ -1.26
CTU2-204ENST00000564105 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms