RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
CDH13-205ENST00000562307 RBM12B-AS1Q9P1G2 102 aa4.8□□□□□ -1.64
CDH13-205ENST00000562307 SPTSSBQ8NFR3 76 aa4.79□□□□□ -1.64
CDH13-205ENST00000562307 H1FX-AS1Q4G0G2 97 aa4.78□□□□□ -1.64
CDH13-205ENST00000562307 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
CDH13-205ENST00000562307 S4R3F8 94 aa4.74□□□□□ -1.65
CDH13-205ENST00000562307 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
CDH13-205ENST00000562307 LCA10Q71F78 164 aa4.73□□□□□ -1.65
CDH13-205ENST00000562307 PSPHP1O15172 72 aa4.72□□□□□ -1.65
CDH13-205ENST00000562307 Q5VV11 94 aa4.72□□□□□ -1.65
CDH13-205ENST00000562307 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
CDH13-205ENST00000562307 A0A1B0GU69 56 aa4.68□□□□□ -1.66
CDH13-205ENST00000562307 SEC61GP60059 68 aa4.65□□□□□ -1.67
CDH13-205ENST00000562307 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
CDH13-205ENST00000562307 CSAG1Q6PB30 78 aa4.64□□□□□ -1.67
CDH13-205ENST00000562307 MUC2Q02817 5179 aa4.6□□□□□ -1.67
CDH13-205ENST00000562307 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.67
CDH13-205ENST00000562307 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
CDH13-205ENST00000562307 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
CDH13-205ENST00000562307 A6NED7 52 aa4.58□□□□□ -1.68
CDH13-205ENST00000562307 H0YAA0 97 aa4.58□□□□□ -1.68
CDH13-205ENST00000562307 UQCR11O14957 56 aa4.56□□□□□ -1.68
CDH13-205ENST00000562307 A0A1B0GU33 70 aa4.55□□□□□ -1.68
CDH13-205ENST00000562307 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
CDH13-205ENST00000562307 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
CDH13-205ENST00000562307 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
CDH13-205ENST00000562307 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
CDH13-205ENST00000562307 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
CDH13-205ENST00000562307 P0C880 135 aa4.52□□□□□ -1.69
CDH13-205ENST00000562307 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
CDH13-205ENST00000562307 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
CDH13-205ENST00000562307 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
CDH13-205ENST00000562307 A8MU10 97 aa4.5□□□□□ -1.69
CDH13-205ENST00000562307 MT1HP80294 61 aa4.47□□□□□ -1.69
CDH13-205ENST00000562307 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
CDH13-205ENST00000562307 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
CDH13-205ENST00000562307 M0QZ58 72 aa4.43□□□□□ -1.7
CDH13-205ENST00000562307 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
CDH13-205ENST00000562307 M0R2T5 61 aa4.37□□□□□ -1.71
CDH13-205ENST00000562307 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
CDH13-205ENST00000562307 R4GN34 69 aa4.35□□□□□ -1.71
CDH13-205ENST00000562307 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
CDH13-205ENST00000562307 A0A0D9SG42 100 aa4.32□□□□□ -1.72
CDH13-205ENST00000562307 A6NN06 94 aa4.32□□□□□ -1.72
CDH13-205ENST00000562307 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
CDH13-205ENST00000562307 MT2AP02795 61 aa4.3□□□□□ -1.72
CDH13-205ENST00000562307 K7ERS5 55 aa4.29□□□□□ -1.72
CDH13-205ENST00000562307 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
CDH13-205ENST00000562307 LCE2AQ5TA79 106 aaPredicted RBP4.29□□□□□ -1.72
CDH13-205ENST00000562307 MT1FP04733 61 aa4.27□□□□□ -1.73
CDH13-205ENST00000562307 LCE2BO14633 110 aa4.26□□□□□ -1.73
CDH13-205ENST00000562307 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
CDH13-205ENST00000562307 SPRR2GQ9BYE4 73 aa4.26□□□□□ -1.73
CDH13-205ENST00000562307 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
CDH13-205ENST00000562307 LINC01554Q52M75 96 aa4.24□□□□□ -1.73
CDH13-205ENST00000562307 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
CDH13-205ENST00000562307 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
CDH13-205ENST00000562307 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
CDH13-205ENST00000562307 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
CDH13-205ENST00000562307 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
CDH13-205ENST00000562307 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
CDH13-205ENST00000562307 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
CDH13-205ENST00000562307 ROMO1P60602 79 aa4.14□□□□□ -1.75
CDH13-205ENST00000562307 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
CDH13-205ENST00000562307 MT1BP07438 61 aa4.07□□□□□ -1.76
CDH13-205ENST00000562307 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
CDH13-205ENST00000562307 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
CDH13-205ENST00000562307 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
CDH13-205ENST00000562307 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
CDH13-205ENST00000562307 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
CDH13-205ENST00000562307 KRTAP25-1Q3LHN0 102 aa3.96□□□□□ -1.78
CDH13-205ENST00000562307 USH2AO75445 5202 aa3.95□□□□□ -1.78
CDH13-205ENST00000562307 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
CDH13-205ENST00000562307 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
CDH13-205ENST00000562307 MT1XP80297 61 aa3.94□□□□□ -1.78
CDH13-205ENST00000562307 TNP1P09430 55 aa3.91□□□□□ -1.78
CDH13-205ENST00000562307 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
CDH13-205ENST00000562307 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
CDH13-205ENST00000562307 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
CDH13-205ENST00000562307 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
CDH13-205ENST00000562307 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
CDH13-205ENST00000562307 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
CDH13-205ENST00000562307 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
CDH13-205ENST00000562307 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
CDH13-205ENST00000562307 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
CDH13-205ENST00000562307 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
CDH13-205ENST00000562307 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
CDH13-205ENST00000562307 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
CDH13-205ENST00000562307 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
CDH13-205ENST00000562307 KRTAP4-8Q9BYQ9 185 aa3.61□□□□□ -1.83
CDH13-205ENST00000562307 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
CDH13-205ENST00000562307 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
CDH13-205ENST00000562307 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
CDH13-205ENST00000562307 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
CDH13-205ENST00000562307 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
CDH13-205ENST00000562307 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
CDH13-205ENST00000562307 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
CDH13-205ENST00000562307 KMT2DO14686 5537 aa3.51□□□□□ -1.85
CDH13-205ENST00000562307 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
CDH13-205ENST00000562307 MT1EP04732 61 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms