RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
TRAF3-209ENST00000560463 H1FX-AS1Q4G0G2 97 aa4.33□□□□□ -1.72
TRAF3-209ENST00000560463 COA5Q86WW8 74 aa4.33□□□□□ -1.72
TRAF3-209ENST00000560463 MUC2Q02817 5179 aa4.32□□□□□ -1.72
TRAF3-209ENST00000560463 UBR4Q5T4S7 5183 aa4.31□□□□□ -1.72
TRAF3-209ENST00000560463 CHKB-CPT1BH3BT56 60 aa4.3□□□□□ -1.72
TRAF3-209ENST00000560463 FLGP20930 4061 aaPredicted RBP4.3□□□□□ -1.72
TRAF3-209ENST00000560463 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
TRAF3-209ENST00000560463 SPTSSBQ8NFR3 76 aa4.29□□□□□ -1.72
TRAF3-209ENST00000560463 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
TRAF3-209ENST00000560463 S4R3F8 94 aa4.28□□□□□ -1.72
TRAF3-209ENST00000560463 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
TRAF3-209ENST00000560463 LCA10Q71F78 164 aa4.24□□□□□ -1.73
TRAF3-209ENST00000560463 CSAG1Q6PB30 78 aa4.21□□□□□ -1.74
TRAF3-209ENST00000560463 V9GYY9 64 aa4.2□□□□□ -1.74
TRAF3-209ENST00000560463 Q1T7F1 81 aa4.18□□□□□ -1.74
TRAF3-209ENST00000560463 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
TRAF3-209ENST00000560463 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
TRAF3-209ENST00000560463 SEC61GP60059 68 aa4.14□□□□□ -1.75
TRAF3-209ENST00000560463 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
TRAF3-209ENST00000560463 H0YAA0 97 aa4.13□□□□□ -1.75
TRAF3-209ENST00000560463 MT1HP80294 61 aa4.13□□□□□ -1.75
TRAF3-209ENST00000560463 A0A1B0GU69 56 aa4.11□□□□□ -1.75
TRAF3-209ENST00000560463 M0R2T5 61 aa4.1□□□□□ -1.75
TRAF3-209ENST00000560463 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
TRAF3-209ENST00000560463 PSPHP1O15172 72 aa4.05□□□□□ -1.76
TRAF3-209ENST00000560463 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
TRAF3-209ENST00000560463 Q5VV11 94 aa4.04□□□□□ -1.76
TRAF3-209ENST00000560463 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
TRAF3-209ENST00000560463 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
TRAF3-209ENST00000560463 A0A1B0GU33 70 aa4.01□□□□□ -1.77
TRAF3-209ENST00000560463 P0C880 135 aa4.01□□□□□ -1.77
TRAF3-209ENST00000560463 UQCR11O14957 56 aa4□□□□□ -1.77
TRAF3-209ENST00000560463 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
TRAF3-209ENST00000560463 A6NED7 52 aa3.97□□□□□ -1.77
TRAF3-209ENST00000560463 M0QZ58 72 aa3.97□□□□□ -1.77
TRAF3-209ENST00000560463 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
TRAF3-209ENST00000560463 MT2AP02795 61 aa3.95□□□□□ -1.78
TRAF3-209ENST00000560463 R4GN34 69 aa3.95□□□□□ -1.78
TRAF3-209ENST00000560463 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
TRAF3-209ENST00000560463 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
TRAF3-209ENST00000560463 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
TRAF3-209ENST00000560463 MT1FP04733 61 aa3.91□□□□□ -1.78
TRAF3-209ENST00000560463 KRTAP13-4Q3LI77 160 aa3.9□□□□□ -1.79
TRAF3-209ENST00000560463 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
TRAF3-209ENST00000560463 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
TRAF3-209ENST00000560463 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
TRAF3-209ENST00000560463 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
TRAF3-209ENST00000560463 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.79
TRAF3-209ENST00000560463 A6NN06 94 aa3.83□□□□□ -1.8
TRAF3-209ENST00000560463 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
TRAF3-209ENST00000560463 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
TRAF3-209ENST00000560463 A0A0D9SG42 100 aa3.82□□□□□ -1.8
TRAF3-209ENST00000560463 A8MU10 97 aa3.82□□□□□ -1.8
TRAF3-209ENST00000560463 K7ERS5 55 aa3.8□□□□□ -1.8
TRAF3-209ENST00000560463 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
TRAF3-209ENST00000560463 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
TRAF3-209ENST00000560463 KRTAP12-1P59990 96 aa3.77□□□□□ -1.81
TRAF3-209ENST00000560463 PRO0628Q9UI54 55 aa3.77□□□□□ -1.81
TRAF3-209ENST00000560463 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
TRAF3-209ENST00000560463 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
TRAF3-209ENST00000560463 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
TRAF3-209ENST00000560463 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
TRAF3-209ENST00000560463 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
TRAF3-209ENST00000560463 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
TRAF3-209ENST00000560463 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
TRAF3-209ENST00000560463 MT1BP07438 61 aa3.7□□□□□ -1.82
TRAF3-209ENST00000560463 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
TRAF3-209ENST00000560463 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
TRAF3-209ENST00000560463 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
TRAF3-209ENST00000560463 LCE3BQ5TA77 95 aa3.65□□□□□ -1.83
TRAF3-209ENST00000560463 SVIPQ8NHG7 77 aa3.64□□□□□ -1.83
TRAF3-209ENST00000560463 USH2AO75445 5202 aa3.63□□□□□ -1.83
TRAF3-209ENST00000560463 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
TRAF3-209ENST00000560463 ROMO1P60602 79 aa3.6□□□□□ -1.83
TRAF3-209ENST00000560463 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
TRAF3-209ENST00000560463 MT1XP80297 61 aa3.57□□□□□ -1.84
TRAF3-209ENST00000560463 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
TRAF3-209ENST00000560463 C10orf95Q9H7T3 257 aa3.57□□□□□ -1.84
TRAF3-209ENST00000560463 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
TRAF3-209ENST00000560463 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
TRAF3-209ENST00000560463 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
TRAF3-209ENST00000560463 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
TRAF3-209ENST00000560463 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
TRAF3-209ENST00000560463 TNP1P09430 55 aa3.51□□□□□ -1.85
TRAF3-209ENST00000560463 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
TRAF3-209ENST00000560463 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
TRAF3-209ENST00000560463 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
TRAF3-209ENST00000560463 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
TRAF3-209ENST00000560463 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
TRAF3-209ENST00000560463 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
TRAF3-209ENST00000560463 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
TRAF3-209ENST00000560463 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
TRAF3-209ENST00000560463 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
TRAF3-209ENST00000560463 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
TRAF3-209ENST00000560463 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
TRAF3-209ENST00000560463 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
TRAF3-209ENST00000560463 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
TRAF3-209ENST00000560463 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
TRAF3-209ENST00000560463 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms