RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 A0A1B0GU69 56 aa12.07□□□□□ -0.48
PIF1-208ENST00000560444 RBM12B-AS1Q9P1G2 102 aa12.04□□□□□ -0.48
PIF1-208ENST00000560444 H1FX-AS1Q4G0G2 97 aa12□□□□□ -0.49
PIF1-208ENST00000560444 BRK1Q8WUW1 75 aa11.99□□□□□ -0.49
PIF1-208ENST00000560444 SEC61GP60059 68 aa11.97□□□□□ -0.49
PIF1-208ENST00000560444 S4R3F8 94 aa11.95□□□□□ -0.5
PIF1-208ENST00000560444 A6NED7 52 aa11.94□□□□□ -0.5
PIF1-208ENST00000560444 LCA10Q71F78 164 aa11.93□□□□□ -0.5
PIF1-208ENST00000560444 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
PIF1-208ENST00000560444 PRO0628Q9UI54 55 aa11.89□□□□□ -0.51
PIF1-208ENST00000560444 MUC17Q685J3 4493 aa11.89□□□□□ -0.51
PIF1-208ENST00000560444 KRTAP4-1Q9BYQ7 146 aa11.83□□□□□ -0.52
PIF1-208ENST00000560444 CDC42SE1Q9NRR8 79 aa11.79□□□□□ -0.52
PIF1-208ENST00000560444 UQCR11O14957 56 aa11.77□□□□□ -0.53
PIF1-208ENST00000560444 CSAG1Q6PB30 78 aa11.68□□□□□ -0.54
PIF1-208ENST00000560444 SPATA8Q6RVD6 105 aa11.68□□□□□ -0.54
PIF1-208ENST00000560444 A8MU10 97 aa11.66□□□□□ -0.54
PIF1-208ENST00000560444 UBR4Q5T4S7 5183 aa11.65□□□□□ -0.54
PIF1-208ENST00000560444 MIR22HGQ0VDD5 57 aa11.64□□□□□ -0.55
PIF1-208ENST00000560444 A0A1B0GU33 70 aa11.64□□□□□ -0.55
PIF1-208ENST00000560444 KRTAP19-2Q3LHN2 52 aa11.6□□□□□ -0.55
PIF1-208ENST00000560444 KRTAP10-6P60371 365 aaPredicted RBP11.56□□□□□ -0.56
PIF1-208ENST00000560444 MUC2Q02817 5179 aa11.55□□□□□ -0.56
PIF1-208ENST00000560444 KRTAP3-2Q9BYR7 98 aa11.55□□□□□ -0.56
PIF1-208ENST00000560444 RNF213Q63HN8 5207 aa11.52□□□□□ -0.57
PIF1-208ENST00000560444 H0YAA0 97 aa11.49□□□□□ -0.57
PIF1-208ENST00000560444 SVIPQ8NHG7 77 aa11.48□□□□□ -0.57
PIF1-208ENST00000560444 ADM2Q7Z4H4 148 aa11.45□□□□□ -0.58
PIF1-208ENST00000560444 P0C880 135 aa11.4□□□□□ -0.58
PIF1-208ENST00000560444 PMAIP1Q13794 54 aa11.37□□□□□ -0.59
PIF1-208ENST00000560444 A6NN06 94 aa11.26□□□□□ -0.61
PIF1-208ENST00000560444 FLGP20930 4061 aaPredicted RBP11.24□□□□□ -0.61
PIF1-208ENST00000560444 KRTAP13-4Q3LI77 160 aa11.24□□□□□ -0.61
PIF1-208ENST00000560444 M0QZ58 72 aa11.21□□□□□ -0.61
PIF1-208ENST00000560444 LCE2CQ5TA81 110 aa11.21□□□□□ -0.61
PIF1-208ENST00000560444 K7ERS5 55 aa11.1□□□□□ -0.63
PIF1-208ENST00000560444 FAT4Q6V0I7 4981 aa11.07□□□□□ -0.64
PIF1-208ENST00000560444 A0A0D9SG42 100 aa11.06□□□□□ -0.64
PIF1-208ENST00000560444 R4GN34 69 aa11.03□□□□□ -0.64
PIF1-208ENST00000560444 MT1HP80294 61 aa10.99□□□□□ -0.65
PIF1-208ENST00000560444 KTN1-AS1Q86SY8 53 aa10.97□□□□□ -0.65
PIF1-208ENST00000560444 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
PIF1-208ENST00000560444 M0R2T5 61 aa10.91□□□□□ -0.66
PIF1-208ENST00000560444 CRIPTQ9P021 101 aa10.91□□□□□ -0.66
PIF1-208ENST00000560444 KRTAP12-1P59990 96 aa10.86□□□□□ -0.67
PIF1-208ENST00000560444 KRTAP12-2P59991 146 aa10.83□□□□□ -0.68
PIF1-208ENST00000560444 LINC01554Q52M75 96 aa10.8□□□□□ -0.68
PIF1-208ENST00000560444 SPINT4Q6UDR6 99 aa10.8□□□□□ -0.68
PIF1-208ENST00000560444 LCE2AQ5TA79 106 aaPredicted RBP10.71□□□□□ -0.69
PIF1-208ENST00000560444 ROMO1P60602 79 aa10.66□□□□□ -0.7
PIF1-208ENST00000560444 KRTAP9-8Q9BYQ0 159 aa10.62□□□□□ -0.71
PIF1-208ENST00000560444 MT2AP02795 61 aa10.59□□□□□ -0.71
PIF1-208ENST00000560444 SPRR2GQ9BYE4 73 aa10.56□□□□□ -0.72
PIF1-208ENST00000560444 PRAC1Q96KF2 57 aa10.55□□□□□ -0.72
PIF1-208ENST00000560444 KRTAP10-10P60014 251 aa10.55□□□□□ -0.72
PIF1-208ENST00000560444 MT1FP04733 61 aa10.53□□□□□ -0.72
PIF1-208ENST00000560444 KRTAP19-1Q8IUB9 90 aa10.47□□□□□ -0.73
PIF1-208ENST00000560444 CAMK2N1Q7Z7J9 78 aa10.36□□□□□ -0.75
PIF1-208ENST00000560444 KRTAP25-1Q3LHN0 102 aa10.33□□□□□ -0.76
PIF1-208ENST00000560444 PLAC4Q8WY50 150 aa10.29□□□□□ -0.76
PIF1-208ENST00000560444 C10orf95Q9H7T3 257 aa10.26□□□□□ -0.77
PIF1-208ENST00000560444 KRTAP19-8Q3LI54 63 aa10.24□□□□□ -0.77
PIF1-208ENST00000560444 KRTAP9-3Q9BYQ3 159 aa10.22□□□□□ -0.77
PIF1-208ENST00000560444 MT1BP07438 61 aa10.04□□□□□ -0.8
PIF1-208ENST00000560444 LCE2BO14633 110 aa9.95□□□□□ -0.82
PIF1-208ENST00000560444 TNP1P09430 55 aa9.93□□□□□ -0.82
PIF1-208ENST00000560444 PP632Q6XCG6 107 aa9.83□□□□□ -0.84
PIF1-208ENST00000560444 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
PIF1-208ENST00000560444 KRTAP23-1A1A580 65 aa9.78□□□□□ -0.84
PIF1-208ENST00000560444 KRTAP10-5P60370 271 aa9.78□□□□□ -0.84
PIF1-208ENST00000560444 MT1XP80297 61 aa9.78□□□□□ -0.84
PIF1-208ENST00000560444 USH2AO75445 5202 aa9.76□□□□□ -0.85
PIF1-208ENST00000560444 PRO2289Q9P1D8 64 aa9.71□□□□□ -0.86
PIF1-208ENST00000560444 KRTAP9-2Q9BYQ4 174 aa9.59□□□□□ -0.87
PIF1-208ENST00000560444 FSIP2Q5CZC0 6907 aa9.5□□□□□ -0.89
PIF1-208ENST00000560444 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
PIF1-208ENST00000560444 LCE3AQ5TA76 89 aa9.42□□□□□ -0.9
PIF1-208ENST00000560444 KRTAP10-7P60409 375 aaPredicted RBP9.38□□□□□ -0.91
PIF1-208ENST00000560444 KRTAP10-12P60413 245 aa9.37□□□□□ -0.91
PIF1-208ENST00000560444 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
PIF1-208ENST00000560444 KRTAP8-1Q8IUC2 63 aa9.28□□□□□ -0.92
PIF1-208ENST00000560444 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.93
PIF1-208ENST00000560444 KRTAP15-1Q3LI76 137 aa9.19□□□□□ -0.94
PIF1-208ENST00000560444 FCGBPQ9Y6R7 5405 aaPredicted RBP9.11□□□□□ -0.95
PIF1-208ENST00000560444 KRTAP9-6A0A140TA67 174 aa9.06□□□□□ -0.96
PIF1-208ENST00000560444 KRTAP12-3P60328 96 aa9.05□□□□□ -0.96
PIF1-208ENST00000560444 KRTAP4-8A0A0G2JLE6 195 aa8.94□□□□□ -0.98
PIF1-208ENST00000560444 KRTAP4-8Q9BYQ9 185 aa8.94□□□□□ -0.98
PIF1-208ENST00000560444 KRTAP19-5Q3LI72 72 aa8.9□□□□□ -0.99
PIF1-208ENST00000560444 KMT2DO14686 5537 aa8.81□□□□□ -1
PIF1-208ENST00000560444 SPRR5A0A1B0GTR4 108 aa8.78□□□□□ -1
PIF1-208ENST00000560444 MACF1Q9UPN3 7388 aaKnown RBP8.72□□□□□ -1.01
PIF1-208ENST00000560444 KRTAP19-7Q3SYF9 63 aa8.72□□□□□ -1.01
PIF1-208ENST00000560444 LUZP6Q538Z0 58 aa8.63□□□□□ -1.03
PIF1-208ENST00000560444 KRTAP19-4Q3LI73 84 aa8.57□□□□□ -1.04
PIF1-208ENST00000560444 NDUFAF8A1L188 74 aa8.56□□□□□ -1.04
PIF1-208ENST00000560444 MT1EP04732 61 aa8.56□□□□□ -1.04
PIF1-208ENST00000560444 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.53□□□□□ -1.04
PIF1-208ENST00000560444 SYNE2Q8WXH0 6885 aaKnown RBP8.52□□□□□ -1.05
PIF1-208ENST00000560444 LCE3CQ5T5A8 94 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms