RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 MP68P56378 58 aa11□□□□□ -0.65
CRNDE-209ENST00000560208 IMUPQ9GZP8 106 aa10.99□□□□□ -0.65
CRNDE-209ENST00000560208 S4R3F8 94 aa10.95□□□□□ -0.66
CRNDE-209ENST00000560208 C5orf47Q569G3 176 aa10.94□□□□□ -0.66
CRNDE-209ENST00000560208 KRTAP19-6Q3LI70 58 aa10.9□□□□□ -0.66
CRNDE-209ENST00000560208 FAM236AA0A1B0GUQ0 79 aa10.89□□□□□ -0.67
CRNDE-209ENST00000560208 FAM236BA0A1B0GV22 79 aa10.89□□□□□ -0.67
CRNDE-209ENST00000560208 KLKP1Q107X0 134 aa10.89□□□□□ -0.67
CRNDE-209ENST00000560208 LCA10Q71F78 164 aa10.87□□□□□ -0.67
CRNDE-209ENST00000560208 H3BPC8 53 aa10.83□□□□□ -0.68
CRNDE-209ENST00000560208 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
CRNDE-209ENST00000560208 MACF1Q9UPN3 7388 aaKnown RBP10.77□□□□□ -0.68
CRNDE-209ENST00000560208 TRAV7A0A075B6U4 112 aa10.76□□□□□ -0.69
CRNDE-209ENST00000560208 SMIM20Q8N5G0 67 aa10.76□□□□□ -0.69
CRNDE-209ENST00000560208 A8MUN3 132 aa10.7□□□□□ -0.7
CRNDE-209ENST00000560208 NDUFC1O43677 76 aa10.62□□□□□ -0.71
CRNDE-209ENST00000560208 SYNE2Q8WXH0 6885 aaKnown RBP10.59□□□□□ -0.71
CRNDE-209ENST00000560208 SNURFQ9Y675 71 aa10.56□□□□□ -0.72
CRNDE-209ENST00000560208 DMAC1Q96GE9 116 aa10.55□□□□□ -0.72
CRNDE-209ENST00000560208 SERP2Q8N6R1 65 aa10.53□□□□□ -0.72
CRNDE-209ENST00000560208 C20orf197Q8N268 126 aa10.49□□□□□ -0.73
CRNDE-209ENST00000560208 KRTAP6-3Q3LI67 103 aa10.44□□□□□ -0.74
CRNDE-209ENST00000560208 SPRR2GQ9BYE4 73 aa10.44□□□□□ -0.74
CRNDE-209ENST00000560208 MT1BP07438 61 aa10.43□□□□□ -0.74
CRNDE-209ENST00000560208 Q5VV11 94 aa10.42□□□□□ -0.74
CRNDE-209ENST00000560208 ACYP2P14621 99 aa10.39□□□□□ -0.75
CRNDE-209ENST00000560208 KRTAP19-8Q3LI54 63 aa10.39□□□□□ -0.75
CRNDE-209ENST00000560208 A6NN06 94 aa10.37□□□□□ -0.75
CRNDE-209ENST00000560208 H0YAA0 97 aa10.36□□□□□ -0.75
CRNDE-209ENST00000560208 ADM2Q7Z4H4 148 aa10.36□□□□□ -0.75
CRNDE-209ENST00000560208 COX7CP15954 63 aa10.31□□□□□ -0.76
CRNDE-209ENST00000560208 SPANXA2-OT1Q8N9U9 137 aa10.27□□□□□ -0.77
CRNDE-209ENST00000560208 CHKB-CPT1BH3BT56 60 aa10.26□□□□□ -0.77
CRNDE-209ENST00000560208 CRIPTQ9P021 101 aa10.26□□□□□ -0.77
CRNDE-209ENST00000560208 KRTAP10-5P60370 271 aa10.22□□□□□ -0.77
CRNDE-209ENST00000560208 KRTAP4-8Q9BYQ9 185 aa10.21□□□□□ -0.77
CRNDE-209ENST00000560208 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
CRNDE-209ENST00000560208 ANAPC13Q9BS18 74 aa10.18□□□□□ -0.78
CRNDE-209ENST00000560208 P0C880 135 aa10.15□□□□□ -0.78
CRNDE-209ENST00000560208 CYSTM1Q9H1C7 97 aa10.12□□□□□ -0.79
CRNDE-209ENST00000560208 H7BZZ5 65 aa10.06□□□□□ -0.8
CRNDE-209ENST00000560208 R4GN34 69 aa10.05□□□□□ -0.8
CRNDE-209ENST00000560208 COA5Q86WW8 74 aa10.04□□□□□ -0.8
CRNDE-209ENST00000560208 M0QZ58 72 aa10.01□□□□□ -0.81
CRNDE-209ENST00000560208 NEBP20929 6669 aa9.99□□□□□ -0.81
CRNDE-209ENST00000560208 MUC12Q9UKN1 5478 aa9.98□□□□□ -0.81
CRNDE-209ENST00000560208 CCDC179H3BU77 68 aa9.97□□□□□ -0.81
CRNDE-209ENST00000560208 KRTAP5-9P26371 169 aa9.9□□□□□ -0.82
CRNDE-209ENST00000560208 LINC01554Q52M75 96 aa9.89□□□□□ -0.83
CRNDE-209ENST00000560208 PLAC4Q8WY50 150 aa9.82□□□□□ -0.84
CRNDE-209ENST00000560208 KMT2DO14686 5537 aa9.79□□□□□ -0.84
CRNDE-209ENST00000560208 PRO2289Q9P1D8 64 aa9.78□□□□□ -0.84
CRNDE-209ENST00000560208 MT1XP80297 61 aa9.75□□□□□ -0.85
CRNDE-209ENST00000560208 KRTAP20-1Q3LI63 56 aa9.73□□□□□ -0.85
CRNDE-209ENST00000560208 SEC61GP60059 68 aa9.72□□□□□ -0.85
CRNDE-209ENST00000560208 LCE3BQ5TA77 95 aa9.72□□□□□ -0.85
CRNDE-209ENST00000560208 MDN1Q9NU22 5596 aa9.71□□□□□ -0.85
CRNDE-209ENST00000560208 KRTAP4-12Q9BQ66 201 aa9.71□□□□□ -0.86
CRNDE-209ENST00000560208 SERP1Q9Y6X1 66 aa9.7□□□□□ -0.86
CRNDE-209ENST00000560208 ATP5EP56381 51 aaPredicted RBP9.67□□□□□ -0.86
CRNDE-209ENST00000560208 KRTAP13-4Q3LI77 160 aa9.64□□□□□ -0.87
CRNDE-209ENST00000560208 SPRR2FQ96RM1 72 aa9.6□□□□□ -0.87
CRNDE-209ENST00000560208 TMEM258P61165 79 aa9.57□□□□□ -0.88
CRNDE-209ENST00000560208 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
CRNDE-209ENST00000560208 A0A1B0GU69 56 aa9.52□□□□□ -0.89
CRNDE-209ENST00000560208 KRTAP8-1Q8IUC2 63 aa9.52□□□□□ -0.89
CRNDE-209ENST00000560208 KRTAP9-9Q9BYP9 154 aa9.52□□□□□ -0.89
CRNDE-209ENST00000560208 KRTAP9-4Q9BYQ2 154 aa9.52□□□□□ -0.89
CRNDE-209ENST00000560208 A0A1B0GU33 70 aa9.5□□□□□ -0.89
CRNDE-209ENST00000560208 SPRR2EP22531 72 aa9.48□□□□□ -0.89
CRNDE-209ENST00000560208 SPRR2BP35325 72 aa9.48□□□□□ -0.89
CRNDE-209ENST00000560208 SPRR2AP35326 72 aa9.48□□□□□ -0.89
CRNDE-209ENST00000560208 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
CRNDE-209ENST00000560208 A0A0D9SG42 100 aa9.45□□□□□ -0.9
CRNDE-209ENST00000560208 KRTAP2-3P0C7H8 128 aa9.45□□□□□ -0.9
CRNDE-209ENST00000560208 KRTAP2-4Q9BYR9 128 aa9.45□□□□□ -0.9
CRNDE-209ENST00000560208 KRTAP4-8A0A0G2JLE6 195 aa9.4□□□□□ -0.9
CRNDE-209ENST00000560208 LCE1AQ5T7P2 110 aa9.34□□□□□ -0.91
CRNDE-209ENST00000560208 CAMK2N1Q7Z7J9 78 aa9.33□□□□□ -0.92
CRNDE-209ENST00000560208 PRR15LQ9BU68 103 aa9.33□□□□□ -0.92
CRNDE-209ENST00000560208 KRTAP10-7P60409 375 aaPredicted RBP9.3□□□□□ -0.92
CRNDE-209ENST00000560208 LINC01558Q9Y6Z2 57 aa9.3□□□□□ -0.92
CRNDE-209ENST00000560208 SPINT4Q6UDR6 99 aa9.29□□□□□ -0.92
CRNDE-209ENST00000560208 KRTAP10-12P60413 245 aa9.26□□□□□ -0.93
CRNDE-209ENST00000560208 SMIM26A0A096LP01 95 aa9.23□□□□□ -0.93
CRNDE-209ENST00000560208 A8MU10 97 aa9.2□□□□□ -0.94
CRNDE-209ENST00000560208 KRTAP12-1P59990 96 aa9.19□□□□□ -0.94
CRNDE-209ENST00000560208 SPRR2DP22532 72 aa9.17□□□□□ -0.94
CRNDE-209ENST00000560208 KRTAP2-2Q9BYT5 123 aa9.14□□□□□ -0.95
CRNDE-209ENST00000560208 KRTAP2-1Q9BYU5 128 aa9.14□□□□□ -0.95
CRNDE-209ENST00000560208 PCP4P48539 62 aa9.11□□□□□ -0.95
CRNDE-209ENST00000560208 LCE1DQ5T752 114 aa9.09□□□□□ -0.95
CRNDE-209ENST00000560208 KRTAP4-7Q9BYR0 210 aa9.08□□□□□ -0.96
CRNDE-209ENST00000560208 UQCR11O14957 56 aa9.01□□□□□ -0.97
CRNDE-209ENST00000560208 V9GYY9 64 aa8.97□□□□□ -0.97
CRNDE-209ENST00000560208 PSPHP1O15172 72 aa8.95□□□□□ -0.98
CRNDE-209ENST00000560208 Q1T7F1 81 aa8.92□□□□□ -0.98
CRNDE-209ENST00000560208 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
CRNDE-209ENST00000560208 KRTAP4-9Q9BYQ8 210 aa8.85□□□□□ -0.99
CRNDE-209ENST00000560208 RPS28P62857 69 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms