RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
CLPX-206ENST00000560166 MRPL34Q9BQ48 92 aaKnown RBP3.42□□□□□ -1.86
CLPX-206ENST00000560166 TP53AIP1Q9HCN2 124 aa3.42□□□□□ -1.86
CLPX-206ENST00000560166 TRAV7A0A075B6U4 112 aa3.41□□□□□ -1.86
CLPX-206ENST00000560166 SERP2Q8N6R1 65 aa3.41□□□□□ -1.86
CLPX-206ENST00000560166 UQCRQO14949 82 aa3.4□□□□□ -1.87
CLPX-206ENST00000560166 WFDC13Q8IUB5 93 aa3.4□□□□□ -1.87
CLPX-206ENST00000560166 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
CLPX-206ENST00000560166 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
CLPX-206ENST00000560166 RETNLBQ9BQ08 111 aa3.39□□□□□ -1.87
CLPX-206ENST00000560166 ANAPC13Q9BS18 74 aa3.39□□□□□ -1.87
CLPX-206ENST00000560166 C5orf47Q569G3 176 aa3.38□□□□□ -1.87
CLPX-206ENST00000560166 C20orf166-AS1Q96NR2 134 aa3.38□□□□□ -1.87
CLPX-206ENST00000560166 A8MUU9 505 aa3.37□□□□□ -1.87
CLPX-206ENST00000560166 H3BPC8 53 aa3.37□□□□□ -1.87
CLPX-206ENST00000560166 COX7CP15954 63 aa3.37□□□□□ -1.87
CLPX-206ENST00000560166 TRAV22A0A0B4J277 110 aa3.36□□□□□ -1.87
CLPX-206ENST00000560166 NDUFS5O43920 106 aa3.35□□□□□ -1.87
CLPX-206ENST00000560166 MP68P56378 58 aa3.35□□□□□ -1.87
CLPX-206ENST00000560166 KLKP1Q107X0 134 aa3.34□□□□□ -1.87
CLPX-206ENST00000560166 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.88
CLPX-206ENST00000560166 C9orf92A6NGG3 77 aa3.33□□□□□ -1.88
CLPX-206ENST00000560166 RPL37P61927 97 aaKnown RBP3.33□□□□□ -1.88
CLPX-206ENST00000560166 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
CLPX-206ENST00000560166 LOC101927531A0A1B0GV80 90 aa3.32□□□□□ -1.88
CLPX-206ENST00000560166 H0Y9P7 68 aa3.32□□□□□ -1.88
CLPX-206ENST00000560166 NDUFC1O43677 76 aa3.32□□□□□ -1.88
CLPX-206ENST00000560166 Q5W150 140 aa3.3□□□□□ -1.88
CLPX-206ENST00000560166 ATP11AUNQ6ZP68 121 aa3.3□□□□□ -1.88
CLPX-206ENST00000560166 C20orf197Q8N268 126 aa3.3□□□□□ -1.88
CLPX-206ENST00000560166 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
CLPX-206ENST00000560166 C1orf64Q8NEQ6 169 aa3.29□□□□□ -1.88
CLPX-206ENST00000560166 LINC00208Q96KT6 92 aa3.29□□□□□ -1.88
CLPX-206ENST00000560166 C7orf65Q6ZTY9 151 aa3.27□□□□□ -1.89
CLPX-206ENST00000560166 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
CLPX-206ENST00000560166 SNURFQ9Y675 71 aa3.26□□□□□ -1.89
CLPX-206ENST00000560166 H7BZZ5 65 aa3.25□□□□□ -1.89
CLPX-206ENST00000560166 TMEM258P61165 79 aa3.25□□□□□ -1.89
CLPX-206ENST00000560166 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
CLPX-206ENST00000560166 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
CLPX-206ENST00000560166 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CLPX-206ENST00000560166 SPINK7P58062 85 aa3.23□□□□□ -1.89
CLPX-206ENST00000560166 PCOTHQ58A44 107 aa3.22□□□□□ -1.89
CLPX-206ENST00000560166 CYSTM1Q9H1C7 97 aa3.22□□□□□ -1.89
CLPX-206ENST00000560166 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
CLPX-206ENST00000560166 A8MUN3 132 aa3.2□□□□□ -1.9
CLPX-206ENST00000560166 FAM236DA0A1B0GTK5 79 aa3.19□□□□□ -1.9
CLPX-206ENST00000560166 FAM236CP0DP71 79 aa3.19□□□□□ -1.9
CLPX-206ENST00000560166 HRES1P13985 223 aa3.19□□□□□ -1.9
CLPX-206ENST00000560166 DMAC1Q96GE9 116 aa3.18□□□□□ -1.9
CLPX-206ENST00000560166 COX6B2Q6YFQ2 88 aa3.17□□□□□ -1.9
CLPX-206ENST00000560166 ACYP2P14621 99 aa3.14□□□□□ -1.91
CLPX-206ENST00000560166 C4orf26Q17RF5 130 aa3.14□□□□□ -1.91
CLPX-206ENST00000560166 CAMK2N1Q7Z7J9 78 aa3.14□□□□□ -1.91
CLPX-206ENST00000560166 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
CLPX-206ENST00000560166 RPS28P62857 69 aaKnown RBP3.13□□□□□ -1.91
CLPX-206ENST00000560166 SERP1Q9Y6X1 66 aa3.13□□□□□ -1.91
CLPX-206ENST00000560166 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
CLPX-206ENST00000560166 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
CLPX-206ENST00000560166 H1FX-AS1Q4G0G2 97 aa3.1□□□□□ -1.91
CLPX-206ENST00000560166 COA5Q86WW8 74 aa3.1□□□□□ -1.91
CLPX-206ENST00000560166 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
CLPX-206ENST00000560166 CHKB-CPT1BH3BT56 60 aa3.07□□□□□ -1.92
CLPX-206ENST00000560166 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
CLPX-206ENST00000560166 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
CLPX-206ENST00000560166 M0R2T5 61 aa3.06□□□□□ -1.92
CLPX-206ENST00000560166 MT1HP80294 61 aa3.05□□□□□ -1.92
CLPX-206ENST00000560166 S4R3F8 94 aa3.05□□□□□ -1.92
CLPX-206ENST00000560166 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
CLPX-206ENST00000560166 V9GYY9 64 aa3.03□□□□□ -1.92
CLPX-206ENST00000560166 LCA10Q71F78 164 aa3.02□□□□□ -1.93
CLPX-206ENST00000560166 USH2AO75445 5202 aa3.01□□□□□ -1.93
CLPX-206ENST00000560166 CSAG1Q6PB30 78 aa3.01□□□□□ -1.93
CLPX-206ENST00000560166 Q1T7F1 81 aa3□□□□□ -1.93
CLPX-206ENST00000560166 SSPOA2VEC9 5147 aa3□□□□□ -1.93
CLPX-206ENST00000560166 H0YAA0 97 aa2.99□□□□□ -1.93
CLPX-206ENST00000560166 LINC01558Q9Y6Z2 57 aa2.99□□□□□ -1.93
CLPX-206ENST00000560166 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
CLPX-206ENST00000560166 A8MU10 97 aa2.98□□□□□ -1.93
CLPX-206ENST00000560166 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
CLPX-206ENST00000560166 PRR15LQ9BU68 103 aa2.96□□□□□ -1.94
CLPX-206ENST00000560166 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
CLPX-206ENST00000560166 A0A1B0GU69 56 aa2.94□□□□□ -1.94
CLPX-206ENST00000560166 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
CLPX-206ENST00000560166 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
CLPX-206ENST00000560166 PSPHP1O15172 72 aa2.89□□□□□ -1.95
CLPX-206ENST00000560166 Q5VV11 94 aa2.89□□□□□ -1.95
CLPX-206ENST00000560166 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
CLPX-206ENST00000560166 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
CLPX-206ENST00000560166 A0A1B0GU33 70 aa2.86□□□□□ -1.95
CLPX-206ENST00000560166 M0QZ58 72 aa2.86□□□□□ -1.95
CLPX-206ENST00000560166 UQCR11O14957 56 aa2.86□□□□□ -1.95
CLPX-206ENST00000560166 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
CLPX-206ENST00000560166 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
CLPX-206ENST00000560166 FLGP20930 4061 aaPredicted RBP2.86□□□□□ -1.95
CLPX-206ENST00000560166 P0C880 135 aa2.85□□□□□ -1.95
CLPX-206ENST00000560166 MT2AP02795 61 aa2.83□□□□□ -1.96
CLPX-206ENST00000560166 A6NED7 52 aa2.82□□□□□ -1.96
CLPX-206ENST00000560166 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
CLPX-206ENST00000560166 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms